Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 3e-24
>seq2
Length=71252344
Score = 127 bits (140), Expect = 3e-24
Identities = 560/881 (64%), Gaps = 9/881 (1%)
Strand=Plus/Plus
Query 13670 GCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAA 13729
|||||| || ||||||| |||||||| || || || || |||||| | || |||||
Sbjct 67569600 GCCCCTTAGTAAAGAAGAGGCAGAGTTTCCAATAGCGTATTCTATCGTGGTTCATCACAA 67569659
Query 13730 GATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGT 13789
|||||| ||| | || | || |||||||||||||| || ||||| |||| ||| |
Sbjct 67569660 GATCGAAATGCTTGACAGGCTACTGAGGGCCATCTATATGCCTCAGAATTTCTATTGCAT 67569719
Query 13790 CCACGTGGACTCCAAGTCCGGCGA--CGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGG 13847
|| |||||| || |||| || | || | | | | | || ||| ||
Sbjct 67569720 TCATGTGGACAGGAAATCCGAGGATTCCTATTTAGCTGCAGTGAT--GGGCATTGCTTCC 67569777
Query 13848 TGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGT 13907
|| ||| ||| || | ||||| ||| || | ||||| || | || |||||
Sbjct 67569778 TGTTTCAGTAATGTCTTCGTGGCCAGCCGATTGGAGAGTGTGGTTTATGCATCGTGGAGC 67569837
Query 13908 CGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGG 13967
|| || ||||| ||||||| ||||||| |||||| |||| | || |||| |
Sbjct 67569838 CGGGTTCAGGCTGACCTCAACTGCATGAAGGACCTCTACGCAATGAGGGCAAATTGGAAG 67569897
Query 13968 TACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGG 14027
|||||| |||| || || |||||||| || || | || ||||||||||| || || ||
Sbjct 67569898 TACCTGATCAATCTTTGTGGGATGGATTTTCCTATTAAAACCAACCTGGAAATTGTCAGG 67569957
Query 14028 GCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCCAACCACAAG 14087
||| ||| || || | ||| |||||| | ||| | ||||| | | |||
Sbjct 67569958 AAGCTCAAGTTGTTGATGGGAGAAAACAACCTGGAAACGGAGAGGATGCCATCCAATAAG 67570017
Query 14088 CTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACCGGC 14147
| | | ||| || | | ||| || || | || ||||| ||
Sbjct 67570018 GAAGAAAGGTGGAAAAAGCGGTATGAGGT---CATTAATGGAAAGTTGACAAACACAGGG 67570074
Query 14148 AGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCG 14207
| ||| | || ||||| | ||| | ||| | || | || ||||||| |
Sbjct 67570075 ACTGTCAAAATGCTTCCTCCGCTGGAAACACCCCTTTTTTCTGGCAGTGCCTACTTTGTG 67570134
Query 14208 GTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCAC 14267
|||| |||||| |||| | || || || | || | | | ||| |
Sbjct 67570135 GTCAGTAGGGAGTATGTGGGGTATGTACTACAGAATGAAAAAATCCAAAAGTTTATGGAA 67570194
Query 14268 TGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTAC 14327
||| | ||||| || ||||| || ||| | || ||||| ||| | ||||| || | |
Sbjct 67570195 TGGGCGCAAGACACATATAGCCCTGATGAGTATCTCTGGGCTACCATCCAGAGGAT-TCC 67570253
Query 14328 GGGACGCCCGGGGGGA-TCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAA 14386
| | |||||| | || | | | | |||||||| || |||||| |||
Sbjct 67570254 TGAAGTCCCGGGCTCACTCTCTGCTAGCCATAAGTACGATTTGTCTGACATGCAGGCGGT 67570313
Query 14387 GGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCC 14446
| |||||| ||||||||||| |||| ||||| ||| | | || || | |||||
Sbjct 67570314 TGCCAGGTTTGTCAAGTGGCAGTACTTTGAGGGTGATGTTTTCAGGGGTGCTCCCTACCC 67570373
Query 14447 GCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTG 14506
|| |||||||| | ||||| | | | | ||| | ||||| | |||||| |||| ||
Sbjct 67570374 ACCCTGCGACGGGGTGCACGTGCGCTCGGTGTGCGTTTTCGGAGCTGGCGACTTGAACTG 67570433
Query 14507 GCTGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACG 14547
| || | || | |||||||| ||||| ||||| ||||
Sbjct 67570434 GATGCTGCGCAAGCACCACCTGTTTGCCAATAAGTTTGACG 67570474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658717082831360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |