Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq102 118 7e-22 seq134 114 9e-21 seq52 114 9e-21 seq38 114 9e-21 seq9 113 3e-20 seq11 111 1e-19 seq85 105 5e-18 seq88 104 2e-17 seq32 100 2e-16 seq4 100 2e-16 seq218 98.7 7e-16 seq116 96.9 2e-15 seq54 95.1 8e-15 seq29 89.7 3e-13 seq14 89.7 3e-13 seq27 87.8 1e-12 seq141 82.4 5e-11 seq33 82.4 5e-11 >seq102 Length=8035806 Score = 118 bits (130), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| |||||||| ||||| || || ||||| ||||||||||| || Sbjct 179381 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAAGTTGAACCC 179440 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || | | |||| |||| | ||| ||| || ||| | | || || ||| Sbjct 179441 TCAGATAAGATAGAAAATGTAAAGGCCACAATCCATGATAAGGAAAGAATTCCTCCTGAT 179500 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 179501 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTT----GACTAC 179556 Query 23788 AACATACAAAAAGAGTCCACA 23808 ||||| ||||| ||||| ||| Sbjct 179557 AACATTCAAAAGGAGTCTACA 179577 Score = 87.8 bits (96), Expect = 1e-12 Identities = 139/198 (70%), Gaps = 5/198 (3%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| |||||||| | ||| || || ||||| ||||| || || || | Sbjct 241899 AATGCAGATTTTCGTGAAAACCCTTAGGGGGAAGACCATCAC-CTCGAGGTCGAACCCTC 241841 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||| | |||| |||| | || || || ||||| | || | ||||| Sbjct 241840 GGATGAGATAGAAAATGTAAAGGCCACGATCCAGGATAAGGAAGGAATTCCTCTTGATCA 241781 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || ||||| ||||| |||| |||||| | ||| ||||| || |||| Sbjct 241780 ACAGAGGCTGATCTTTGCTGGCAAGCAACCGGAAGATGGACGTACTTT----GACTACAG 241725 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||| ||||| || Sbjct 241724 CATTCAAAAGGAGTCTAC 241707 >seq134 Length=5851302 Score = 114 bits (126), Expect = 9e-21 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| |||||||| ||||| || || ||||| ||||| ||||| || Sbjct 3733157 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 3733216 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || || | |||| |||| || || || || ||||| | || || ||| Sbjct 3733217 TCAGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 3733276 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 3733277 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 3733336 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| || || ||||| || | ||| | || || || Sbjct 3733337 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAG 3733374 >seq52 Length=16356641 Score = 114 bits (126), Expect = 9e-21 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| |||||||| ||||| || || ||||| ||||| ||||| || Sbjct 10618873 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 10618932 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| |||| || || || || ||||| | || || || Sbjct 10618933 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAG 10618992 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 10618993 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 10619052 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 ||||| || || ||||| || | ||| | || ||| Sbjct 10619053 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTA 10619088 >seq38 Length=19171412 Score = 114 bits (126), Expect = 9e-21 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| |||||||| ||||| || || ||||| ||||| ||||| || Sbjct 14820745 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 14820686 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || || | |||| |||| || || || || ||||| | || || ||| Sbjct 14820685 TCAGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 14820626 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 14820625 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 14820566 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| || || ||||| || | ||| | || || || Sbjct 14820565 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAG 14820528 >seq9 Length=44311105 Score = 113 bits (124), Expect = 3e-20 Identities = 146/198 (74%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||||||||| || || ||||| || || || || ||| Sbjct 19097129 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 19097188 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | |||||| ||||| || ||| | || || || || Sbjct 19097189 GACACCATTGAGAATGTCAAAGC-CAAAATTCAAGACAAGGAGGGTATCCCACCTGACCA 19097247 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | ||||||||| ||||||| ||||| || | | ||| | || ||||| Sbjct 19097248 GCAGCGTCTGATATTTGCCAGCAAACAGCTGGAGGATGGCCTCACGCT--CAGAATACAA 19097305 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||||||||| Sbjct 19097306 CATCCAGAAAGAGTCCAC 19097323 Score = 109 bits (120), Expect = 4e-19 Identities = 145/198 (73%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||||||||| || || ||||| || || || || ||| Sbjct 14505647 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 14505706 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| ||| ||| | ||| | |||||| ||||| |||||| | || | || || Sbjct 14505707 GACACCACTGAGAATGTCAAAGC-CAAAATTCAAGACAAGGAAGGTATCCCACTTGACCA 14505765 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || | ||||||||||||||||| ||||| || | ||||| | || ||||| Sbjct 14505766 GCAGTGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCACGCT--CAGACTACAA 14505823 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 14505824 CATCCAGAAGGAGTCCAC 14505841 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 || ||||| || || || ||||||||||| | || ||||| || || || || ||| Sbjct 3708220 ATACAGATCTTTGTGAAGACCCTCACGGGCAGGACCATCACCCTTGAGGTCGAGCCCAGT 3708279 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || ||| ||| | ||| | |||||| ||||| || ||| | || || || || Sbjct 3708280 GATACCACTGAGAATGTCAAAGC-CAAAATTCAAGACAAGGAGGGTATCCCACCTGACCA 3708338 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || | ||||||||||| ||||| ||||| || | |||| | || ||||| Sbjct 3708339 GCAGTGTCTGATATTTGCCGGTAAACAGCTGGAGGATGGCGGCACACTCTCAGACTACAA 3708398 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||||||||| Sbjct 3708399 CATTCAGAAAGAGTCCAC 3708416 >seq11 Length=43820709 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || ||||| || || || || ||| Sbjct 25320957 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 25320898 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | |||| || ||||| | ||| | || || || || Sbjct 25320897 GACACCATTGAGAATGTCAAAGCCAAAA-TTCAAGACAAGAAGGGTATCCCACCTGACCA 25320839 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | ||||||||||||||||| ||||| || | ||||| | || |||| Sbjct 25320838 GCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCACGCTCTCAGACAACAA 25320779 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||||||||| Sbjct 25320778 CATCCAGAAAGAGTCCAC 25320761 >seq85 Length=9676098 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| |||||||| || || || || ||||| ||||| ||||| || Sbjct 5982426 AAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACCC 5982485 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || |||| |||| || || || || ||||| | || || ||| Sbjct 5982486 TCGGATACGACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 5982545 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | || ||||| ||||| ||||||||||| ||| ||||| || ||| Sbjct 5982546 CAGCAAAGACGGATCTTTGCTGGCAAGTAACTGGAAGACAGACGTACTTTGTCTGACTAC 5982605 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| ||||| ||||| || | ||| | || || || Sbjct 5982606 AACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAG 5982643 >seq88 Length=9397244 Score = 104 bits (114), Expect = 2e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 23613 GCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGA 23672 |||||| || || || ||||||||||| || || ||||| || | || || ||| || Sbjct 1074345 GCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTAAGGTCGAGCCCAGTGA 1074286 Query 23673 CACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAAC 23731 ||| |||| ||| | ||| | |||| || ||||| || ||| | || | ||||| | Sbjct 1074285 CACCATTGAGAATGTCAAAGCCAAAA-TTCAAGACAAGGAGGGTATCCCATCTGATCAGC 1074227 Query 23732 AGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACA 23791 ||| | | |||||||| || ||||| ||||| || | ||||| | || ||||||| Sbjct 1074226 AGCCTCTGATATTTGCTGGTAAACAGCTGGAGGATGGCCGCACACTCTCAGACTACAACA 1074167 Query 23792 TACAAAAAGAGTCCAC 23807 | || ||||||||||| Sbjct 1074166 TCCAGAAAGAGTCCAC 1074151 >seq32 Length=21366645 Score = 100 bits (110), Expect = 2e-16 Identities = 145/202 (72%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||| |||| || || || | |||||||| || | ||||| || || || || |||| Sbjct 21077664 ATGTAGATCTTTGTGAAGATACTCACGGGCAAGATCATCACCCTTGAGGTCGAGTCCAGT 21077723 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| ||| ||| | ||| | |||| || |||||||||||| | || || || || Sbjct 21077724 GACACCACTGAGAATGTCAAAGCCAAAA-TTCAAGACAAAGAAGGTATCCCACCTGACCA 21077782 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || |||| |||||||||||||| |||| || | |||||| | || ||||| Sbjct 21077783 GCAGTGTCTAATCTTTGCCGGCAAACAGATGGAGGATGGCCGCACTCTCTCAGACTACAA 21077842 Query 23790 CATACAAAAA----GAGTCCAC 23807 ||| || ||| |||||||| Sbjct 21077843 CATCCAGAAATCTGGAGTCCAC 21077864 >seq4 Length=54856640 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| |||| ||| ||||| || || ||||||||||| | ||| || Sbjct 17517507 AAAATGCAGATTTTCGTGAAAATCCTTACGGGGAAGACTATCACTCTCGAGGCTGAACCC 17517566 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| |||| || || || | |||| | || || ||| Sbjct 17517567 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATGAGGAAGAAATTCCTCCTGAT 17517626 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 17517627 CAGCAAACACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 17517686 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || || ||||| || Sbjct 17517687 AACATTCAGAAGGAGTCTAC 17517706 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| | || |||||||||| ||| || || ||||| || || || || |||| Sbjct 22855852 ATGCAGATCTCTGTGAAAACCCTCATGGGCAAGACCATCACCCTTGAGGTCGAGTCCAAT 22855911 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| ||| | | ||| |||||| || || || ||| | | || || || Sbjct 22855912 GACACCACTGAGAACGTCAAAGCCAAAATTCAAGAGAAGGAGGGTATCCAACCTGACCAG 22855971 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | ||||||||||| ||| ||||| || | |||||| | || |||||| Sbjct 22855972 CAGCGTCTGATATTTGCCGGTAAATCGCTGGAGGATGGCCGCACTCTCTCAGACTACAAC 22856031 Query 23791 ATACAAAAAGAGTCCACATTACA 23813 | || |||||| ||| |||| Sbjct 22856032 ACCCAGAAAGAGGTCACCCTACA 22856054 >seq218 Length=888862 Score = 98.7 bits (108), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| |||||||| | ||| || || ||||| || || ||||| || Sbjct 160792 AAAATGCAGATTTTCGTGAAAACCCTTAAGGGGAAGACCATCACCCTTGAGGTTGAACCC 160733 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| | | |||| |||| || || || || ||||| | || || ||| Sbjct 160732 TCGGATAGGATAGAAAATGTAAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 160673 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 160672 CAGCAAAG--ACATCTTTGCTGGCAAGCAACTGGAAGAGGGACGTACTTTGTCTGACTAC 160615 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| || || ||||| || | ||| | || || || Sbjct 160614 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAG 160577 >seq116 Length=6990774 Score = 96.9 bits (106), Expect = 2e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||||||||| || |||||||| | ||| || || ||||| ||| | | ||| | Sbjct 541502 AAAATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACCCTCAAGGCTGAACCT 541561 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| |||| || || || || ||||| | || || ||| Sbjct 541562 TCGGATACAATAGAAAACGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 541621 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | | | ||||| || ||| Sbjct 541622 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTAC 541681 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| ||||| ||||| | || ||| | || || || Sbjct 541682 AACATTCAAAAGGAGTCTATTTTTCATCTTGTGTTGAG 541719 >seq54 Length=16265076 Score = 95.1 bits (104), Expect = 8e-15 Identities = 155/222 (70%), Gaps = 1/222 (0%) Strand=Plus/Minus Query 23604 ACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGA 23663 ||| |||| ||||||||| || |||||||| || || || || ||||| ||||| | ||| Sbjct 5607231 ACTGAAAA-GCAGATTTTTGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGCTGA 5607173 Query 23664 CTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCC 23723 || |||| ||| |||| |||| || ||| || || ||||| | || || Sbjct 5607172 ACCCTCGGATACTACAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGCATTCCTCC 5607113 Query 23724 AGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGA 23783 ||||| || | | || ||||| ||||| ||||||||||| | | | | ||| || Sbjct 5607112 TGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTATTTTGTCTGA 5607053 Query 23784 TTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 |||||||| || || ||||| || | ||| | || || || Sbjct 5607052 CTACAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAG 5607011 >seq29 Length=23066823 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||| | |||||||| | ||| || || |||| ||||| ||||| || Sbjct 6880995 AAAATGCAGATTTTCATGAAAACCCTTATGGGGAAGACCGTCACCCTCGAGGTTGAACCC 6881054 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 || || | |||| |||| | || || || ||||| | || || | | Sbjct 6881055 TTGGTTACGATAGAAAATATAAAGGCCAGGATCCAGGATAAGGAAGGAATTCCTCCTGTT 6881114 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 6881115 CAGCAAAAACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTT----GACTAC 6881170 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| || || ||||| ||| | ||| | || || || || || || || Sbjct 6881171 AACATTCAGAAGGAGTCTACACTTCATCTTGTGTTGAGATTTCGTGGTGG 6881220 >seq14 Length=37227512 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||||||||| || |||||||||| ||| || | ||||| || || ||||| || Sbjct 27608000 AAAATGCAGATTTTTGTGAAAACCCTCATGGGGAAGATCATCACCCTTGAGGTTGAACCC 27607941 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| |||| |||| || || || || ||||| | || || ||| Sbjct 27607940 TCCGACACGACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 27607881 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || | | | || ||||| ||||| ||||||||||| || ||||| || ||| Sbjct 27607880 CAGGAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATAGACATACTTT----GACTAC 27607825 Query 23788 AACATACAAAAAGAGTC 23804 ||||| ||||| ||||| Sbjct 27607824 AACATTCAAAAGGAGTC 27607808 >seq27 Length=24139186 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 || |||||| ||| | || || || || || || || ||||| ||||| || | ||| Sbjct 5857919 AAGGCAGATCTTCATGAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCCAGCCCAG 5857978 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||| | |||||| | || ||| || ||||||||||| | || || || || Sbjct 5857979 TGACATTATTGAAAACATCAAGGCAAAGATCCAGGACAAAGAAGGCATCCCTCCTGAGCA 5858038 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || ||||| |||||||||| ||||| | || ||||| Sbjct 5858039 GCAGAGATCGATCTTTGCTGGGAAACAGCTGGAAGACGGGCGCACCCTTTCTGACTACAA 5858098 Query 23790 CATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 5858099 TATCCAGAAAGAGTCCAC 5858116 >seq141 Length=4680182 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||| |||| || || | |||||||| || || || ||||| || || || || ||| Sbjct 4589708 ATGTAGATCTTTGTGAGGACCCTCACAGGTAAGACCATCACCCTTGAGGTCGAGCCCAGT 4589767 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | ||| |||||| ||||| || ||| | || || || || Sbjct 4589768 GACACCATTGAGACTGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAG 4589827 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||| | | || |||| |||||||||||||| || | || |||| | || | |||| Sbjct 4589828 CAGCATCTGATCCTTGCTGGCAAACAACTGGAGGATGGACACACTCTCTCAGACTGCAAC 4589887 Query 23791 ATACAAAAAGAGTCC 23805 || || ||| | ||| Sbjct 4589888 ATCCAGAAACAATCC 4589902 >seq33 Length=21137282 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||| || ||||| || || || || ||||| || || || || || Sbjct 15373527 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACGCTGGAGGTGGAGCCC 15373586 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | |||| | || || || || || ||||| | || || || Sbjct 15373587 AGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCCGAC 15373646 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||| | | || ||||| ||||| || |||||||| | | |||| | || ||| Sbjct 15373647 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCACACTCTTTCTGACTAC 15373706 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || |||||||| || Sbjct 15373707 AACATCCAGAAAGAGTCGAC 15373726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337998535044488