Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq102 118 7e-22
seq134 114 9e-21
seq52 114 9e-21
seq38 114 9e-21
seq9 113 3e-20
seq11 111 1e-19
seq85 105 5e-18
seq88 104 2e-17
seq32 100 2e-16
seq4 100 2e-16
seq218 98.7 7e-16
seq116 96.9 2e-15
seq54 95.1 8e-15
seq29 89.7 3e-13
seq14 89.7 3e-13
seq27 87.8 1e-12
seq141 82.4 5e-11
seq33 82.4 5e-11
>seq102
Length=8035806
Score = 118 bits (130), Expect = 7e-22
Identities = 147/201 (73%), Gaps = 4/201 (2%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||||| ||||| || || ||||| ||||||||||| ||
Sbjct 179381 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAAGTTGAACCC 179440
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| || | | |||| |||| | ||| ||| || ||| | | || || |||
Sbjct 179441 TCAGATAAGATAGAAAATGTAAAGGCCACAATCCATGATAAGGAAAGAATTCCTCCTGAT 179500
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | || ||||| ||||| ||||||||||| | ||| ||||| || |||
Sbjct 179501 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTT----GACTAC 179556
Query 23788 AACATACAAAAAGAGTCCACA 23808
||||| ||||| ||||| |||
Sbjct 179557 AACATTCAAAAGGAGTCTACA 179577
Score = 87.8 bits (96), Expect = 1e-12
Identities = 139/198 (70%), Gaps = 5/198 (3%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||||||||| |||||||| | ||| || || ||||| ||||| || || || |
Sbjct 241899 AATGCAGATTTTCGTGAAAACCCTTAGGGGGAAGACCATCAC-CTCGAGGTCGAACCCTC 241841
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||| | |||| |||| | || || || ||||| | || | |||||
Sbjct 241840 GGATGAGATAGAAAATGTAAAGGCCACGATCCAGGATAAGGAAGGAATTCCTCTTGATCA 241781
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | | || ||||| ||||| |||| |||||| | ||| ||||| || ||||
Sbjct 241780 ACAGAGGCTGATCTTTGCTGGCAAGCAACCGGAAGATGGACGTACTTT----GACTACAG 241725
Query 23790 CATACAAAAAGAGTCCAC 23807
||| ||||| ||||| ||
Sbjct 241724 CATTCAAAAGGAGTCTAC 241707
>seq134
Length=5851302
Score = 114 bits (126), Expect = 9e-21
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||||| ||||| || || ||||| ||||| ||||| ||
Sbjct 3733157 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 3733216
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| || || | |||| |||| || || || || ||||| | || || |||
Sbjct 3733217 TCAGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 3733276
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | || ||||| ||||| ||||||||||| | ||| ||||| || |||
Sbjct 3733277 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 3733336
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| || || ||||| || | ||| | || || ||
Sbjct 3733337 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAG 3733374
>seq52
Length=16356641
Score = 114 bits (126), Expect = 9e-21
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||||| ||||| || || ||||| ||||| ||||| ||
Sbjct 10618873 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 10618932
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | |||| |||| || || || || ||||| | || || ||
Sbjct 10618933 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAG 10618992
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | || ||||| ||||| ||||||||||| | ||| ||||| || |||
Sbjct 10618993 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 10619052
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823
||||| || || ||||| || | ||| | || |||
Sbjct 10619053 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTA 10619088
>seq38
Length=19171412
Score = 114 bits (126), Expect = 9e-21
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||||| ||||| || || ||||| ||||| ||||| ||
Sbjct 14820745 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 14820686
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| || || | |||| |||| || || || || ||||| | || || |||
Sbjct 14820685 TCAGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 14820626
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | || ||||| ||||| ||||||||||| | ||| ||||| || |||
Sbjct 14820625 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 14820566
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| || || ||||| || | ||| | || || ||
Sbjct 14820565 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAG 14820528
>seq9
Length=44311105
Score = 113 bits (124), Expect = 3e-20
Identities = 146/198 (74%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||||||||| || || ||||| || || || || |||
Sbjct 19097129 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 19097188
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | ||| | |||||| ||||| || ||| | || || || ||
Sbjct 19097189 GACACCATTGAGAATGTCAAAGC-CAAAATTCAAGACAAGGAGGGTATCCCACCTGACCA 19097247
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | ||||||||| ||||||| ||||| || | | ||| | || |||||
Sbjct 19097248 GCAGCGTCTGATATTTGCCAGCAAACAGCTGGAGGATGGCCTCACGCT--CAGAATACAA 19097305
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || |||||||||||
Sbjct 19097306 CATCCAGAAAGAGTCCAC 19097323
Score = 109 bits (120), Expect = 4e-19
Identities = 145/198 (73%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||||||||| || || ||||| || || || || |||
Sbjct 14505647 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 14505706
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| ||| ||| | ||| | |||||| ||||| |||||| | || | || ||
Sbjct 14505707 GACACCACTGAGAATGTCAAAGC-CAAAATTCAAGACAAGGAAGGTATCCCACTTGACCA 14505765
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| || | ||||||||||||||||| ||||| || | ||||| | || |||||
Sbjct 14505766 GCAGTGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCACGCT--CAGACTACAA 14505823
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 14505824 CATCCAGAAGGAGTCCAC 14505841
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|| ||||| || || || ||||||||||| | || ||||| || || || || |||
Sbjct 3708220 ATACAGATCTTTGTGAAGACCCTCACGGGCAGGACCATCACCCTTGAGGTCGAGCCCAGT 3708279
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || ||| ||| | ||| | |||||| ||||| || ||| | || || || ||
Sbjct 3708280 GATACCACTGAGAATGTCAAAGC-CAAAATTCAAGACAAGGAGGGTATCCCACCTGACCA 3708338
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| || | ||||||||||| ||||| ||||| || | |||| | || |||||
Sbjct 3708339 GCAGTGTCTGATATTTGCCGGTAAACAGCTGGAGGATGGCGGCACACTCTCAGACTACAA 3708398
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || |||||||||||
Sbjct 3708399 CATTCAGAAAGAGTCCAC 3708416
>seq11
Length=43820709
Score = 111 bits (122), Expect = 1e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || |||||||| || || || ||||| || || || || |||
Sbjct 25320957 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 25320898
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | ||| | |||| || ||||| | ||| | || || || ||
Sbjct 25320897 GACACCATTGAGAATGTCAAAGCCAAAA-TTCAAGACAAGAAGGGTATCCCACCTGACCA 25320839
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | ||||||||||||||||| ||||| || | ||||| | || ||||
Sbjct 25320838 GCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCACGCTCTCAGACAACAA 25320779
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || |||||||||||
Sbjct 25320778 CATCCAGAAAGAGTCCAC 25320761
>seq85
Length=9676098
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||||| || || || || ||||| ||||| ||||| ||
Sbjct 5982426 AAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACCC 5982485
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || |||| |||| || || || || ||||| | || || |||
Sbjct 5982486 TCGGATACGACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 5982545
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | || ||||| ||||| ||||||||||| ||| ||||| || |||
Sbjct 5982546 CAGCAAAGACGGATCTTTGCTGGCAAGTAACTGGAAGACAGACGTACTTTGTCTGACTAC 5982605
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| ||||| ||||| || | ||| | || || ||
Sbjct 5982606 AACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAG 5982643
>seq88
Length=9397244
Score = 104 bits (114), Expect = 2e-17
Identities = 142/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 23613 GCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGA 23672
|||||| || || || ||||||||||| || || ||||| || | || || ||| ||
Sbjct 1074345 GCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTAAGGTCGAGCCCAGTGA 1074286
Query 23673 CACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAAC 23731
||| |||| ||| | ||| | |||| || ||||| || ||| | || | ||||| |
Sbjct 1074285 CACCATTGAGAATGTCAAAGCCAAAA-TTCAAGACAAGGAGGGTATCCCATCTGATCAGC 1074227
Query 23732 AGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACA 23791
||| | | |||||||| || ||||| ||||| || | ||||| | || |||||||
Sbjct 1074226 AGCCTCTGATATTTGCTGGTAAACAGCTGGAGGATGGCCGCACACTCTCAGACTACAACA 1074167
Query 23792 TACAAAAAGAGTCCAC 23807
| || |||||||||||
Sbjct 1074166 TCCAGAAAGAGTCCAC 1074151
>seq32
Length=21366645
Score = 100 bits (110), Expect = 2e-16
Identities = 145/202 (72%), Gaps = 6/202 (3%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||| |||| || || || | |||||||| || | ||||| || || || || ||||
Sbjct 21077664 ATGTAGATCTTTGTGAAGATACTCACGGGCAAGATCATCACCCTTGAGGTCGAGTCCAGT 21077723
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| ||| ||| | ||| | |||| || |||||||||||| | || || || ||
Sbjct 21077724 GACACCACTGAGAATGTCAAAGCCAAAA-TTCAAGACAAAGAAGGTATCCCACCTGACCA 21077782
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| || |||| |||||||||||||| |||| || | |||||| | || |||||
Sbjct 21077783 GCAGTGTCTAATCTTTGCCGGCAAACAGATGGAGGATGGCCGCACTCTCTCAGACTACAA 21077842
Query 23790 CATACAAAAA----GAGTCCAC 23807
||| || ||| ||||||||
Sbjct 21077843 CATCCAGAAATCTGGAGTCCAC 21077864
>seq4
Length=54856640
Score = 100 bits (110), Expect = 2e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||| ||| ||||| || || ||||||||||| | ||| ||
Sbjct 17517507 AAAATGCAGATTTTCGTGAAAATCCTTACGGGGAAGACTATCACTCTCGAGGCTGAACCC 17517566
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | |||| |||| || || || | |||| | || || |||
Sbjct 17517567 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATGAGGAAGAAATTCCTCCTGAT 17517626
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | || ||||| ||||| ||||||||||| | ||| ||||| || |||
Sbjct 17517627 CAGCAAACACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 17517686
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| || || ||||| ||
Sbjct 17517687 AACATTCAGAAGGAGTCTAC 17517706
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| | || |||||||||| ||| || || ||||| || || || || ||||
Sbjct 22855852 ATGCAGATCTCTGTGAAAACCCTCATGGGCAAGACCATCACCCTTGAGGTCGAGTCCAAT 22855911
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| ||| | | ||| |||||| || || || ||| | | || || ||
Sbjct 22855912 GACACCACTGAGAACGTCAAAGCCAAAATTCAAGAGAAGGAGGGTATCCAACCTGACCAG 22855971
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | ||||||||||| ||| ||||| || | |||||| | || ||||||
Sbjct 22855972 CAGCGTCTGATATTTGCCGGTAAATCGCTGGAGGATGGCCGCACTCTCTCAGACTACAAC 22856031
Query 23791 ATACAAAAAGAGTCCACATTACA 23813
| || |||||| ||| ||||
Sbjct 22856032 ACCCAGAAAGAGGTCACCCTACA 22856054
>seq218
Length=888862
Score = 98.7 bits (108), Expect = 7e-16
Identities = 153/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||||| | ||| || || ||||| || || ||||| ||
Sbjct 160792 AAAATGCAGATTTTCGTGAAAACCCTTAAGGGGAAGACCATCACCCTTGAGGTTGAACCC 160733
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| | | |||| |||| || || || || ||||| | || || |||
Sbjct 160732 TCGGATAGGATAGAAAATGTAAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 160673
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | || ||||| ||||| ||||||||||| | ||| ||||| || |||
Sbjct 160672 CAGCAAAG--ACATCTTTGCTGGCAAGCAACTGGAAGAGGGACGTACTTTGTCTGACTAC 160615
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| || || ||||| || | ||| | || || ||
Sbjct 160614 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAG 160577
>seq116
Length=6990774
Score = 96.9 bits (106), Expect = 2e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|||||||||||||| || |||||||| | ||| || || ||||| ||| | | ||| |
Sbjct 541502 AAAATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACCCTCAAGGCTGAACCT 541561
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | |||| |||| || || || || ||||| | || || |||
Sbjct 541562 TCGGATACAATAGAAAACGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 541621
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | || ||||| ||||| ||||||||||| | | | ||||| || |||
Sbjct 541622 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTAC 541681
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| ||||| ||||| | || ||| | || || ||
Sbjct 541682 AACATTCAAAAGGAGTCTATTTTTCATCTTGTGTTGAG 541719
>seq54
Length=16265076
Score = 95.1 bits (104), Expect = 8e-15
Identities = 155/222 (70%), Gaps = 1/222 (0%)
Strand=Plus/Minus
Query 23604 ACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGA 23663
||| |||| ||||||||| || |||||||| || || || || ||||| ||||| | |||
Sbjct 5607231 ACTGAAAA-GCAGATTTTTGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGCTGA 5607173
Query 23664 CTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCC 23723
|| |||| ||| |||| |||| || ||| || || ||||| | || ||
Sbjct 5607172 ACCCTCGGATACTACAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGCATTCCTCC 5607113
Query 23724 AGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGA 23783
||||| || | | || ||||| ||||| ||||||||||| | | | | ||| ||
Sbjct 5607112 TGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTATTTTGTCTGA 5607053
Query 23784 TTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
|||||||| || || ||||| || | ||| | || || ||
Sbjct 5607052 CTACAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAG 5607011
>seq29
Length=23066823
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||| | |||||||| | ||| || || |||| ||||| ||||| ||
Sbjct 6880995 AAAATGCAGATTTTCATGAAAACCCTTATGGGGAAGACCGTCACCCTCGAGGTTGAACCC 6881054
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|| || | |||| |||| | || || || ||||| | || || | |
Sbjct 6881055 TTGGTTACGATAGAAAATATAAAGGCCAGGATCCAGGATAAGGAAGGAATTCCTCCTGTT 6881114
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | || ||||| ||||| ||||||||||| | ||| ||||| || |||
Sbjct 6881115 CAGCAAAAACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTT----GACTAC 6881170
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||||| || || ||||| ||| | ||| | || || || || || || ||
Sbjct 6881171 AACATTCAGAAGGAGTCTACACTTCATCTTGTGTTGAGATTTCGTGGTGG 6881220
>seq14
Length=37227512
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 4/197 (2%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|||||||||||||| || |||||||||| ||| || | ||||| || || ||||| ||
Sbjct 27608000 AAAATGCAGATTTTTGTGAAAACCCTCATGGGGAAGATCATCACCCTTGAGGTTGAACCC 27607941
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| |||| |||| || || || || ||||| | || || |||
Sbjct 27607940 TCCGACACGACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 27607881
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| | | | || ||||| ||||| ||||||||||| || ||||| || |||
Sbjct 27607880 CAGGAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATAGACATACTTT----GACTAC 27607825
Query 23788 AACATACAAAAAGAGTC 23804
||||| ||||| |||||
Sbjct 27607824 AACATTCAAAAGGAGTC 27607808
>seq27
Length=24139186
Score = 87.8 bits (96), Expect = 1e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|| |||||| ||| | || || || || || || || ||||| ||||| || | |||
Sbjct 5857919 AAGGCAGATCTTCATGAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCCAGCCCAG 5857978
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||| | |||||| | || ||| || ||||||||||| | || || || ||
Sbjct 5857979 TGACATTATTGAAAACATCAAGGCAAAGATCCAGGACAAAGAAGGCATCCCTCCTGAGCA 5858038
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| || ||||| |||||||||| ||||| | || |||||
Sbjct 5858039 GCAGAGATCGATCTTTGCTGGGAAACAGCTGGAAGACGGGCGCACCCTTTCTGACTACAA 5858098
Query 23790 CATACAAAAAGAGTCCAC 23807
|| || |||||||||||
Sbjct 5858099 TATCCAGAAAGAGTCCAC 5858116
>seq141
Length=4680182
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||| |||| || || | |||||||| || || || ||||| || || || || |||
Sbjct 4589708 ATGTAGATCTTTGTGAGGACCCTCACAGGTAAGACCATCACCCTTGAGGTCGAGCCCAGT 4589767
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | ||| |||||| ||||| || ||| | || || || ||
Sbjct 4589768 GACACCATTGAGACTGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAG 4589827
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||| | | || |||| |||||||||||||| || | || |||| | || | ||||
Sbjct 4589828 CAGCATCTGATCCTTGCTGGCAAACAACTGGAGGATGGACACACTCTCTCAGACTGCAAC 4589887
Query 23791 ATACAAAAAGAGTCC 23805
|| || ||| | |||
Sbjct 4589888 ATCCAGAAACAATCC 4589902
>seq33
Length=21137282
Score = 82.4 bits (90), Expect = 5e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||| ||||| || ||||| || || || || ||||| || || || || ||
Sbjct 15373527 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACGCTGGAGGTGGAGCCC 15373586
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| | |||| | || || || || || ||||| | || || ||
Sbjct 15373587 AGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCCGAC 15373646
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| ||||| || |||||||| | | |||| | || |||
Sbjct 15373647 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCACACTCTTTCTGACTAC 15373706
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| || |||||||| ||
Sbjct 15373707 AACATCCAGAAAGAGTCGAC 15373726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337998535044488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |