Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq134 158 3e-33
seq33 147 5e-30
seq4 136 9e-27
seq218 132 1e-25
seq8 132 1e-25
seq71 123 6e-23
seq59 123 6e-23
seq79 120 7e-22
seq77 114 3e-20
seq49 113 1e-19
seq7 107 5e-18
seq2686 105 2e-17
seq19 104 6e-17
seq12 93.3 1e-13
seq9 91.5 4e-13
seq142 86.0 1e-11
seq97 86.0 1e-11
seq141 84.2 5e-11
seq63 84.2 5e-11
seq1 84.2 5e-11
>seq134
Length=5851302
Score = 158 bits (174), Expect = 3e-33
Identities = 170/225 (76%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| ||||| || ||||| || || || || | ||||| || | ||||||
Sbjct 3733381 ACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGT 3733322
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || ||||| ||||| ||||| |||| ||| || || || ||||| ||
Sbjct 3733321 ACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCC 3733262
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||| ||| ||| || || ||||||| ||| || || |
Sbjct 3733261 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGGGTTCAACCTCGAG 3733202
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| ||||| | ||||| | ||| | ||||||||
Sbjct 3733201 GGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 3733157
>seq33
Length=21137282
Score = 147 bits (162), Expect = 5e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || || || ||||| |||| ||||| || | | ||| |||||
Sbjct 15373742 CAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGTGGCCATC 15373683
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| |||||||| || || ||||| || | || |||||||| || || |||||||| ||
Sbjct 15373682 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATC 15373623
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| ||||||| |||||||||||| || ||||| || | |||||| ||
Sbjct 15373622 CTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGCGTGATGGT 15373563
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|||||| |||| || || | ||| | ||||||||
Sbjct 15373562 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 15373527
>seq4
Length=54856640
Score = 136 bits (150), Expect = 9e-27
Identities = 165/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||||||| ||||| || ||||| || || || || | ||||| || | ||||||
Sbjct 17517731 ACGAAGTCTCAGCACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGT 17517672
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || ||||| ||||| ||||| ||| ||| || || || ||||| |
Sbjct 17517671 ACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTGTTTGCTGATCAGGAGGAATTTC 17517612
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| || |||||||| ||| ||| ||| || || || |||| ||| | || |
Sbjct 17517611 TTCCTCATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAGCCTCGAG 17517552
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| ||||| | |||| | ||| | ||||||||
Sbjct 17517551 AGTGATAGTCTTCCCCGTAAGGATTTTCACGAAAATCTGCATTTT 17517507
>seq218
Length=888862
Score = 132 bits (146), Expect = 1e-25
Identities = 165/225 (73%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| ||||| || ||||| || || || || | ||||| || | ||||||
Sbjct 160570 ACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGT 160629
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || ||||| || ||||| ||||| ||||| ||| ||| || || || ||||| ||
Sbjct 160630 ACGTCCCTCTTCCAGTTGCTTGCCAGCAAAGAT--GTCTTTGCTGATCAGGAGGAATTCC 160687
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||| ||| ||| || | || |||| ||| || || |
Sbjct 160688 TTCCTTATCCTGGATCTTGACCTTTACATTTTCTATCCTATCCGAGGGTTCAACCTCAAG 160747
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| ||| | | ||||| | ||| | ||||||||
Sbjct 160748 GGTGATGGTCTTCCCCTTAAGGGTTTTCACGAAAATCTGCATTTT 160792
Score = 118 bits (130), Expect = 3e-21
Identities = 161/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| ||||| || ||||| || | || || | ||||| || | ||||||
Sbjct 683679 ACGAAGTCTCAACACAAGATGAAGAGTAGACTTCTTCTGAATGTTGTAGTCAGACAAAGT 683738
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || ||||| ||||| ||||| |||| ||| || || || ||||| ||
Sbjct 683739 ACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCC 683798
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||| ||| ||| || || ||| | || ||
Sbjct 683799 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTAT------CCAGCGTTCAGCCTCGAA 683852
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| ||| | | ||||| | ||| | ||||||||
Sbjct 683853 GGTGATGGTCTTCCCCTTAAGGGTTTTCACGAAAATCTGCATTTT 683897
>seq8
Length=45331107
Score = 132 bits (146), Expect = 1e-25
Identities = 163/223 (73%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 225494 GAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTC 225553
||||||||| || || || ||||| || || ||||| | ||||| || | || ||| |
Sbjct 31945659 GAAGTCTCAACACCAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAGAGTAC 31945600
Query 225554 TCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTT 225613
||||||||||| ||||| ||||| |||| | || ||| || || || ||||| ||||
Sbjct 31945599 GTCCATCTTCTAGTTGCTTGCCAGCATAGATCAATCTTTGCTGATCAGGAGGAATTCCTT 31945540
Query 225614 CCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACG 225673
|||| || |||||||| ||| || ||| | || ||||||| ||| || | | |
Sbjct 31945539 CCTTATCCTGGATCTTGGCCTTTACGTTTTCTTTCGTATCTGAGGGTTCAACCTGGAGGG 31945480
Query 225674 TGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|||| ||||| |||| | ||||| | |||| | ||||||||
Sbjct 31945479 TGATAGTCTTCTCCGTAAGAGTTTGTGTGAAAATCTGCATTTT 31945437
>seq71
Length=11673789
Score = 123 bits (136), Expect = 6e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| |||| || || || ||||| |||| ||||| || | | ||| | |||||
Sbjct 72285 CAGGACCAGGTACAGGGTTGACTCTTTCTGGATGTTGTAGTCAGGAAGAGTGCGGCCATC 72226
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| |||||||| || || ||||| || | || |||||| | || || |||||||| ||
Sbjct 72225 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGTGGGGGATGCCTTCCTTATC 72166
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| ||| ||| |||||||||||| | ||||| || | ||||| ||
Sbjct 72165 CTGGATCTTGGCCTTGACATTTTCGATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGT 72106
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|||||| |||| || || | || | ||||||||
Sbjct 72105 CTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTT 72070
>seq59
Length=14671897
Score = 123 bits (136), Expect = 6e-23
Identities = 137/183 (75%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| | ||| ||| |||| ||||| |||| ||||| || | || || | ||||||
Sbjct 11745338 CAGGACCAAGTGCAGAATGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 11745279
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| ||||| ||||| || ||||| | || || ||||| || || || |||||||||||
Sbjct 11745278 TTCCAGCTGTTTCCCGGCAAAGATCAATCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTC 11745219
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||||| ||| ||| || |||||||| || || || || | ||||| ||
Sbjct 11745218 TTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 11745159
Query 225681 CTT 225683
|||
Sbjct 11745158 CTT 11745156
Score = 98.7 bits (108), Expect = 2e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||| ||||| || ||||| || || || | ||||| || | | | | |||||||
Sbjct 11745109 AGGATGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGATAGGTTGCGCCCATCT 11745050
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| |||| || ||||| | || |||||||| || || || ||||||||||||
Sbjct 11745049 TCCAGCTGTTTCCTGGCAAAGATCAATCTCTGTTGGTCAGGAGGGATGCCTTCCTTGTCT 11744990
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||||||| ||| || | |||||||| || || || || | ||||| |||
Sbjct 11744989 TGGATCTTTGCCTTGACGTTCTTAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTC 11744930
Query 225682 TTGCCCGTCAAAGTTTT 225698
|| | |||| ||| ||
Sbjct 11744929 TTACTGGTCAGAGTCTT 11744913
>seq79
Length=10412959
Score = 120 bits (132), Expect = 7e-22
Identities = 145/198 (73%), Gaps = 7/198 (4%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || || || ||||| |||| ||||| || | | ||| | |||||
Sbjct 108419 CAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATC 108360
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGC-------GGAATACCTT 225613
||| |||||||| || || ||||| || | || || ||||| ||||| ||||
Sbjct 108359 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGATCGGGGAGAGGGGGGAATGCCTT 108300
Query 225614 CCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACG 225673
|||| || |||||||| ||||||| |||||||||||| || ||||| || | |
Sbjct 108299 CCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGG 108240
Query 225674 TGATCGTCTTGCCCGTCA 225691
|||| |||||||| ||||
Sbjct 108239 TGATGGTCTTGCCGGTCA 108222
>seq77
Length=10698663
Score = 114 bits (126), Expect = 3e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|||||||| |||||||| || || ||||| || | || |||||||| || || ||||||
Sbjct 10127811 CCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCC 10127752
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|| || |||||||| ||||||| |||||||||||| || ||||| || | |||
Sbjct 10127751 TTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 10127692
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| |||||||| |||| || || | ||| | |||||
Sbjct 10127691 ATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 10127654
>seq49
Length=16587080
Score = 113 bits (124), Expect = 1e-19
Identities = 161/225 (72%), Gaps = 5/225 (2%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| ||||| | ||||| | || ||||| | |||| || ||||||
Sbjct 2336107 ACGAAGTCTCAACACAAGTGGAAGAGTAG-CTCCTTTTGAATGTTGT----GGTCAAAGT 2336161
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || ||||| ||||| ||||| |||| ||| || || || ||||| ||
Sbjct 2336162 GCATCCATCTTCCAGTTGCTTTCCAGCCAAGATCAGTCTTTGATGATCAGGAGGAATTCC 2336221
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| || || ||||| ||| |||| ||| || | || |||| || || || |
Sbjct 2336222 ATCCTTATCCTGCATCTTAGCCTTTACAGTTTCTATCATATCCGAGGGTTTGACTTCGAG 2336281
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| || || | ||||| | ||| | || |||||
Sbjct 2336282 GGTGATGGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGTATTTT 2336326
>seq7
Length=46157118
Score = 107 bits (118), Expect = 5e-18
Identities = 159/228 (70%), Gaps = 12/228 (5%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || || || ||||| |||| | ||| || | | ||| | |||||
Sbjct 37069869 CAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTCGTAGTCAGAAAGAGTGCGGCCATC 37069928
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| |||||||| || || ||||| || | || ||||||| || || |||||||| ||
Sbjct 37069929 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGGTGGTCGGCGGGGATGCCTTCCTTATC 37069988
Query 225621 TTGG------------ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTC 225668
||| ||||| ||||||| |||||||||||| || ||||| ||
Sbjct 37069989 CTGGGATGCCTTCCTTATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTC 37070048
Query 225669 TAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
| ||||| |||||||| |||| || || | || | ||||||||
Sbjct 37070049 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGACAATCTGCATTTT 37070096
>seq2686
Length=16473
Score = 105 bits (116), Expect = 2e-17
Identities = 123/166 (74%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 7556 TTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGG 7615
||| |||||||||| | || || ||||| || |||| ||||||||| | || || ||
Sbjct 5471 TTTTCAACGTTATTGTCACCGCCCATGCATTCATTATAATTTTCTTTATAGTAATACCCA 5530
Query 7616 TTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGG 7675
| || || || ||||| ||||| ||| || | || |||| ||||||||||| || || |
Sbjct 5531 TCATAATTGGAGGTTTTGGAAACTGACTCATCCCGCTAATAATTGGTGCTCCCGACATAG 5590
Query 7676 CTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTC 7721
| ||||| | | || || |||||||| ||| | ||||| || ||
Sbjct 5591 CATTTCCTCGAATAAATAACATAAGTTTCTGACTCCTACCCCCATC 5636
Score = 104 bits (114), Expect = 6e-17
Identities = 84/102 (82%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727
||| ||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct 6043 ATACTTCAGGATGTCCAAAAAATCAGAATAAATGTTGGTAAAGAATAGGGTCGCCTCCCC 5984
Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTA 370769
| | ||| || || ||| || |||| ||| | ||||||||
Sbjct 5983 CAGCTGGGTCGAAGAAGGAGGTGTTAAGATTGCGATCAGTTA 5942
>seq19
Length=29834108
Score = 104 bits (114), Expect = 6e-17
Identities = 143/201 (71%), Gaps = 12/201 (6%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||||| ||||| || || || ||||| |||| ||||| || | | ||| || || ||
Sbjct 19334715 CAGGAGCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCTGCCGTC 19334656
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTC-----------GGGCGGA-AT 225608
||| |||||||| || || ||||| || | ||||||| |||||| ||
Sbjct 19334655 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGTTGGTTAGGGGGTGGGGGGGCGGGGAT 19334596
Query 225609 ACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTC 225668
|||||||| || |||||||| ||||||| |||||||||||| || ||||| ||
Sbjct 19334595 GCCTTCCTTATCCTGGATCTTGGTCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTC 19334536
Query 225669 TAACGTGATCGTCTTGCCCGT 225689
| ||||| |||||||| ||
Sbjct 19334535 CAGGGTGATGGTCTTGCCAGT 19334515
>seq12
Length=39782659
Score = 93.3 bits (102), Expect = 1e-13
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076
||||||| ||||| || || ||| | || ||| || ||||| ||||||||||| ||||
Sbjct 910097 CACTTCAGTACCTGGCTCCTTACTCTGGCTGTTCCATGGGAGAGTATTTTAGAGACAATG 910156
Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACAATTCAA 5122
| ||||||||||| |||||||| ||||| ||| ||||| ||||
Sbjct 910157 GCAAACATGCTTTGATCATCTATGATGACTTATCCAAACAGGTCAA 910202
Score = 91.5 bits (100), Expect = 4e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530
|||| || |||||||| || || || |||||||| || || |||||||| ||||||||
Sbjct 910536 AATACCTGTCCATCAGTGATGGAAATGACATTTGTTGGAATGTAAGCAGACACATCACCA 910477
Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
|| |||||||| | || || ||||| || | || ||||||||||||
Sbjct 910476 GCCTGTGTTTCTATGACTGGCAAGGCAGTCAAGGAGCCACCACCAAAA 910429
>seq9
Length=44311105
Score = 91.5 bits (100), Expect = 4e-13
Identities = 141/198 (71%), Gaps = 4/198 (2%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | ||| || ||||| || ||||| ||||| |||| ||||| || | | ||
Sbjct 19097347 CGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTATTCTG--AGCGTG 19097290
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
||||| || ||||| || | || || || || || || ||||| || || |||||
Sbjct 19097289 AGGCCATCCTCCAGCTGTTTGCTGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCC 19097230
Query 225613 TCCTTGTCTTGGATCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||||| || ||| |||| ||| || |||||||| || || || || |
Sbjct 19097229 TCCTTGTCTTGAAT-TTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAG 19097171
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| |||||||||||
Sbjct 19097170 GGTGATGGTCTTGCCCGT 19097153
Score = 86.0 bits (94), Expect = 1e-11
Identities = 140/198 (71%), Gaps = 4/198 (2%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | ||| || ||||| || ||||| || || |||| ||||| || | | ||
Sbjct 14505865 CGCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTG--AGCGTG 14505808
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||| || ||||| || || || || || || | || ||||| | || ||||||
Sbjct 14505807 CGGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGACACTGCTGGTCAAGTGGGATACCT 14505748
Query 225613 TCCTTGTCTTGGATCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||||| || ||| |||| ||| || ||||||| || || || || |
Sbjct 14505747 TCCTTGTCTTGAAT-TTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCGACCTCAAG 14505689
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| |||||||||||
Sbjct 14505688 GGTGATGGTCTTGCCCGT 14505671
>seq142
Length=4652101
Score = 86.0 bits (94), Expect = 1e-11
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076
||||||| ||||| || || ||| | || ||| |||||||| |||||||||| || |
Sbjct 4499049 CACTTCAGTACCTGGCTCCCTACTCTGGCTGTTACATAGGAGAGTATTTTAGAGGCAACG 4498990
Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACA 5116
| |||||||||||||||||||| |||| ||| |||||
Sbjct 4498989 GCAAACATGCTTTAATCATCTATGATGGCTTATTCAAACA 4498950
>seq97
Length=8594300
Score = 86.0 bits (94), Expect = 1e-11
Identities = 140/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||| || ||||| || ||||| ||||| |||| ||| | || | | ||| | ||||
Sbjct 7807799 CAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGCAGTCTGAGAGAGTGCAGCCATG 7807740
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
|| ||||| || | || || || || | || ||||| || | ||||| ||||||||
Sbjct 7807739 CTCCAGCTGTTTGCTGGCAAACATCAGACACTGCTGGTCAGGTAGGATACCCTCCTTGTC 7807680
Query 225621 TTGGATCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCG 225679
||| || ||| |||| ||| || |||||||| || || || || | ||||| |
Sbjct 7807679 TTGAAT-TTTGGCTTTGACATTCTCAATGGTGTCACCAGTCTCGACCTCAAGGGTGATGG 7807621
Query 225680 TCTTGCCCGTCAAAGTTTT 225698
|||||||||| | ||| ||
Sbjct 7807620 TCTTGCCCGTGAGAGTCTT 7807602
>seq141
Length=4680182
Score = 84.2 bits (92), Expect = 5e-11
Identities = 134/190 (71%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||| || ||||| || | ||||| ||| |||| ||| | || | | ||| |||||
Sbjct 4589920 CAGCACCAGGTGCAGGGCGGATTGTTTCTGGATGTTGCAGTCTGAGAGAGTGTGTCCATC 4589861
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
|| || || || ||||| | ||| || | || ||||| || || ||||| ||||||||
Sbjct 4589860 CTCCAGTTGTTTGCCAGCAAGGATCAGATGCTGCTGGTCAGGTGGGATACCCTCCTTGTC 4589801
Query 225621 TTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCG 225679
||| || ||| || || |||| || |||||||| || || || || | ||||| |
Sbjct 4589800 TTGAAT-TTTGGCTTTGACAGTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG 4589742
Query 225680 TCTTGCCCGT 225689
|||| || ||
Sbjct 4589741 TCTTACCTGT 4589732
>seq63
Length=13147851
Score = 84.2 bits (92), Expect = 5e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732
||||| |||||||||||||| ||||||||||| ||||||||||| || || ||||| |
Sbjct 3590159 TCAGGGTGACCAAAAAATCAAAATAAATGTTGGTAAAGGATAGGGTCACCCCCGCCAGCA 3590100
Query 370733 GGATCAAAAAA 370743
|| ||||||||
Sbjct 3590099 GGGTCAAAAAA 3590089
>seq1
Length=72162052
Score = 84.2 bits (92), Expect = 5e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
|||||| |||||| |||||||||||||||||||||| | |||||| || ||||| || |
Sbjct 71181803 TTCAGGGTGACCAGAAAATCAGAATAAATGTTGATATAAGATAGGGTCACCTCCACCAGC 71181744
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770
|| ||||| || ||||||| | | | | |||||||
Sbjct 71181743 AGGGTCAAAGAAAGTAGTATTGAGGATACAAACAGTTAA 71181705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192490159784084
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |