Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq134 158 3e-33 seq33 147 5e-30 seq4 136 9e-27 seq218 132 1e-25 seq8 132 1e-25 seq71 123 6e-23 seq59 123 6e-23 seq79 120 7e-22 seq77 114 3e-20 seq49 113 1e-19 seq7 107 5e-18 seq2686 105 2e-17 seq19 104 6e-17 seq12 93.3 1e-13 seq9 91.5 4e-13 seq142 86.0 1e-11 seq97 86.0 1e-11 seq141 84.2 5e-11 seq63 84.2 5e-11 seq1 84.2 5e-11 >seq134 Length=5851302 Score = 158 bits (174), Expect = 3e-33 Identities = 170/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || ||||| || || || || | ||||| || | |||||| Sbjct 3733381 ACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGT 3733322 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| ||||| ||||| |||| ||| || || || ||||| || Sbjct 3733321 ACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCC 3733262 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || |||||||| ||| ||| ||| || || ||||||| ||| || || | Sbjct 3733261 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGGGTTCAACCTCGAG 3733202 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| ||||| | ||||| | ||| | |||||||| Sbjct 3733201 GGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 3733157 >seq33 Length=21137282 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| ||||| || || || ||||| |||| ||||| || | | ||| ||||| Sbjct 15373742 CAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGTGGCCATC 15373683 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || || ||||| || | || |||||||| || || |||||||| || Sbjct 15373682 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATC 15373623 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||||||| |||||||||||| || ||||| || | |||||| || Sbjct 15373622 CTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGCGTGATGGT 15373563 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 |||||| |||| || || | ||| | |||||||| Sbjct 15373562 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 15373527 >seq4 Length=54856640 Score = 136 bits (150), Expect = 9e-27 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||||||| ||||| || ||||| || || || || | ||||| || | |||||| Sbjct 17517731 ACGAAGTCTCAGCACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGT 17517672 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| ||||| ||||| ||| ||| || || || ||||| | Sbjct 17517671 ACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTGTTTGCTGATCAGGAGGAATTTC 17517612 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| || |||||||| ||| ||| ||| || || || |||| ||| | || | Sbjct 17517611 TTCCTCATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAGCCTCGAG 17517552 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| ||||| | |||| | ||| | |||||||| Sbjct 17517551 AGTGATAGTCTTCCCCGTAAGGATTTTCACGAAAATCTGCATTTT 17517507 >seq218 Length=888862 Score = 132 bits (146), Expect = 1e-25 Identities = 165/225 (73%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || ||||| || || || || | ||||| || | |||||| Sbjct 160570 ACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGT 160629 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| || ||||| ||||| ||||| ||| ||| || || || ||||| || Sbjct 160630 ACGTCCCTCTTCCAGTTGCTTGCCAGCAAAGAT--GTCTTTGCTGATCAGGAGGAATTCC 160687 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || |||||||| ||| ||| ||| || | || |||| ||| || || | Sbjct 160688 TTCCTTATCCTGGATCTTGACCTTTACATTTTCTATCCTATCCGAGGGTTCAACCTCAAG 160747 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| ||| | | ||||| | ||| | |||||||| Sbjct 160748 GGTGATGGTCTTCCCCTTAAGGGTTTTCACGAAAATCTGCATTTT 160792 Score = 118 bits (130), Expect = 3e-21 Identities = 161/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || ||||| || | || || | ||||| || | |||||| Sbjct 683679 ACGAAGTCTCAACACAAGATGAAGAGTAGACTTCTTCTGAATGTTGTAGTCAGACAAAGT 683738 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| ||||| ||||| |||| ||| || || || ||||| || Sbjct 683739 ACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCC 683798 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || |||||||| ||| ||| ||| || || ||| | || || Sbjct 683799 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTAT------CCAGCGTTCAGCCTCGAA 683852 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| ||| | | ||||| | ||| | |||||||| Sbjct 683853 GGTGATGGTCTTCCCCTTAAGGGTTTTCACGAAAATCTGCATTTT 683897 >seq8 Length=45331107 Score = 132 bits (146), Expect = 1e-25 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 225494 GAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTC 225553 ||||||||| || || || ||||| || || ||||| | ||||| || | || ||| | Sbjct 31945659 GAAGTCTCAACACCAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAGAGTAC 31945600 Query 225554 TCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTT 225613 ||||||||||| ||||| ||||| |||| | || ||| || || || ||||| |||| Sbjct 31945599 GTCCATCTTCTAGTTGCTTGCCAGCATAGATCAATCTTTGCTGATCAGGAGGAATTCCTT 31945540 Query 225614 CCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACG 225673 |||| || |||||||| ||| || ||| | || ||||||| ||| || | | | Sbjct 31945539 CCTTATCCTGGATCTTGGCCTTTACGTTTTCTTTCGTATCTGAGGGTTCAACCTGGAGGG 31945480 Query 225674 TGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 |||| ||||| |||| | ||||| | |||| | |||||||| Sbjct 31945479 TGATAGTCTTCTCCGTAAGAGTTTGTGTGAAAATCTGCATTTT 31945437 >seq71 Length=11673789 Score = 123 bits (136), Expect = 6e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| |||| || || || ||||| |||| ||||| || | | ||| | ||||| Sbjct 72285 CAGGACCAGGTACAGGGTTGACTCTTTCTGGATGTTGTAGTCAGGAAGAGTGCGGCCATC 72226 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || || ||||| || | || |||||| | || || |||||||| || Sbjct 72225 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGTGGGGGATGCCTTCCTTATC 72166 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| ||| |||||||||||| | ||||| || | ||||| || Sbjct 72165 CTGGATCTTGGCCTTGACATTTTCGATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGT 72106 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 |||||| |||| || || | || | |||||||| Sbjct 72105 CTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTT 72070 >seq59 Length=14671897 Score = 123 bits (136), Expect = 6e-23 Identities = 137/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| | ||| ||| |||| ||||| |||| ||||| || | || || | |||||| Sbjct 11745338 CAGGACCAAGTGCAGAATGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 11745279 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| ||||| || ||||| | || || ||||| || || || ||||||||||| Sbjct 11745278 TTCCAGCTGTTTCCCGGCAAAGATCAATCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTC 11745219 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||||| ||| ||| || |||||||| || || || || | ||||| || Sbjct 11745218 TTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 11745159 Query 225681 CTT 225683 ||| Sbjct 11745158 CTT 11745156 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||| ||||| || ||||| || || || | ||||| || | | | | ||||||| Sbjct 11745109 AGGATGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGATAGGTTGCGCCCATCT 11745050 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| |||| || ||||| | || |||||||| || || || |||||||||||| Sbjct 11745049 TCCAGCTGTTTCCTGGCAAAGATCAATCTCTGTTGGTCAGGAGGGATGCCTTCCTTGTCT 11744990 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| || | |||||||| || || || || | ||||| ||| Sbjct 11744989 TGGATCTTTGCCTTGACGTTCTTAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTC 11744930 Query 225682 TTGCCCGTCAAAGTTTT 225698 || | |||| ||| || Sbjct 11744929 TTACTGGTCAGAGTCTT 11744913 >seq79 Length=10412959 Score = 120 bits (132), Expect = 7e-22 Identities = 145/198 (73%), Gaps = 7/198 (4%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| ||||| || || || ||||| |||| ||||| || | | ||| | ||||| Sbjct 108419 CAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATC 108360 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGC-------GGAATACCTT 225613 ||| |||||||| || || ||||| || | || || ||||| ||||| |||| Sbjct 108359 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGATCGGGGAGAGGGGGGAATGCCTT 108300 Query 225614 CCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACG 225673 |||| || |||||||| ||||||| |||||||||||| || ||||| || | | Sbjct 108299 CCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGG 108240 Query 225674 TGATCGTCTTGCCCGTCA 225691 |||| |||||||| |||| Sbjct 108239 TGATGGTCTTGCCGGTCA 108222 >seq77 Length=10698663 Score = 114 bits (126), Expect = 3e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| |||||||| || || ||||| || | || |||||||| || || |||||| Sbjct 10127811 CCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCC 10127752 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || || |||||||| ||||||| |||||||||||| || ||||| || | ||| Sbjct 10127751 TTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 10127692 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| |||| || || | ||| | ||||| Sbjct 10127691 ATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 10127654 >seq49 Length=16587080 Score = 113 bits (124), Expect = 1e-19 Identities = 161/225 (72%), Gaps = 5/225 (2%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| | ||||| | || ||||| | |||| || |||||| Sbjct 2336107 ACGAAGTCTCAACACAAGTGGAAGAGTAG-CTCCTTTTGAATGTTGT----GGTCAAAGT 2336161 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| ||||| ||||| |||| ||| || || || ||||| || Sbjct 2336162 GCATCCATCTTCCAGTTGCTTTCCAGCCAAGATCAGTCTTTGATGATCAGGAGGAATTCC 2336221 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| || || ||||| ||| |||| ||| || | || |||| || || || | Sbjct 2336222 ATCCTTATCCTGCATCTTAGCCTTTACAGTTTCTATCATATCCGAGGGTTTGACTTCGAG 2336281 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| || || | ||||| | ||| | || ||||| Sbjct 2336282 GGTGATGGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGTATTTT 2336326 >seq7 Length=46157118 Score = 107 bits (118), Expect = 5e-18 Identities = 159/228 (70%), Gaps = 12/228 (5%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| ||||| || || || ||||| |||| | ||| || | | ||| | ||||| Sbjct 37069869 CAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTCGTAGTCAGAAAGAGTGCGGCCATC 37069928 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || || ||||| || | || ||||||| || || |||||||| || Sbjct 37069929 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGGTGGTCGGCGGGGATGCCTTCCTTATC 37069988 Query 225621 TTGG------------ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTC 225668 ||| ||||| ||||||| |||||||||||| || ||||| || Sbjct 37069989 CTGGGATGCCTTCCTTATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTC 37070048 Query 225669 TAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 | ||||| |||||||| |||| || || | || | |||||||| Sbjct 37070049 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGACAATCTGCATTTT 37070096 >seq2686 Length=16473 Score = 105 bits (116), Expect = 2e-17 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 7556 TTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGG 7615 ||| |||||||||| | || || ||||| || |||| ||||||||| | || || || Sbjct 5471 TTTTCAACGTTATTGTCACCGCCCATGCATTCATTATAATTTTCTTTATAGTAATACCCA 5530 Query 7616 TTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGG 7675 | || || || ||||| ||||| ||| || | || |||| ||||||||||| || || | Sbjct 5531 TCATAATTGGAGGTTTTGGAAACTGACTCATCCCGCTAATAATTGGTGCTCCCGACATAG 5590 Query 7676 CTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTC 7721 | ||||| | | || || |||||||| ||| | ||||| || || Sbjct 5591 CATTTCCTCGAATAAATAACATAAGTTTCTGACTCCTACCCCCATC 5636 Score = 104 bits (114), Expect = 6e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||| | Sbjct 6043 ATACTTCAGGATGTCCAAAAAATCAGAATAAATGTTGGTAAAGAATAGGGTCGCCTCCCC 5984 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTA 370769 | | ||| || || ||| || |||| ||| | |||||||| Sbjct 5983 CAGCTGGGTCGAAGAAGGAGGTGTTAAGATTGCGATCAGTTA 5942 >seq19 Length=29834108 Score = 104 bits (114), Expect = 6e-17 Identities = 143/201 (71%), Gaps = 12/201 (6%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||| ||||| || || || ||||| |||| ||||| || | | ||| || || || Sbjct 19334715 CAGGAGCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCTGCCGTC 19334656 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTC-----------GGGCGGA-AT 225608 ||| |||||||| || || ||||| || | ||||||| |||||| || Sbjct 19334655 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGTTGGTTAGGGGGTGGGGGGGCGGGGAT 19334596 Query 225609 ACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTC 225668 |||||||| || |||||||| ||||||| |||||||||||| || ||||| || Sbjct 19334595 GCCTTCCTTATCCTGGATCTTGGTCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTC 19334536 Query 225669 TAACGTGATCGTCTTGCCCGT 225689 | ||||| |||||||| || Sbjct 19334535 CAGGGTGATGGTCTTGCCAGT 19334515 >seq12 Length=39782659 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076 ||||||| ||||| || || ||| | || ||| || ||||| ||||||||||| |||| Sbjct 910097 CACTTCAGTACCTGGCTCCTTACTCTGGCTGTTCCATGGGAGAGTATTTTAGAGACAATG 910156 Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACAATTCAA 5122 | ||||||||||| |||||||| ||||| ||| ||||| |||| Sbjct 910157 GCAAACATGCTTTGATCATCTATGATGACTTATCCAAACAGGTCAA 910202 Score = 91.5 bits (100), Expect = 4e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 |||| || |||||||| || || || |||||||| || || |||||||| |||||||| Sbjct 910536 AATACCTGTCCATCAGTGATGGAAATGACATTTGTTGGAATGTAAGCAGACACATCACCA 910477 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 || |||||||| | || || ||||| || | || |||||||||||| Sbjct 910476 GCCTGTGTTTCTATGACTGGCAAGGCAGTCAAGGAGCCACCACCAAAA 910429 >seq9 Length=44311105 Score = 91.5 bits (100), Expect = 4e-13 Identities = 141/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || ||||| || ||||| ||||| |||| ||||| || | | || Sbjct 19097347 CGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTATTCTG--AGCGTG 19097290 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 ||||| || ||||| || | || || || || || || ||||| || || ||||| Sbjct 19097289 AGGCCATCCTCCAGCTGTTTGCTGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCC 19097230 Query 225613 TCCTTGTCTTGGATCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| || ||| |||| ||| || |||||||| || || || || | Sbjct 19097229 TCCTTGTCTTGAAT-TTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAG 19097171 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||||||||| Sbjct 19097170 GGTGATGGTCTTGCCCGT 19097153 Score = 86.0 bits (94), Expect = 1e-11 Identities = 140/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || ||||| || ||||| || || |||| ||||| || | | || Sbjct 14505865 CGCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTG--AGCGTG 14505808 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || ||||| || || || || || || | || ||||| | || |||||| Sbjct 14505807 CGGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGACACTGCTGGTCAAGTGGGATACCT 14505748 Query 225613 TCCTTGTCTTGGATCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| || ||| |||| ||| || ||||||| || || || || | Sbjct 14505747 TCCTTGTCTTGAAT-TTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCGACCTCAAG 14505689 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||||||||| Sbjct 14505688 GGTGATGGTCTTGCCCGT 14505671 >seq142 Length=4652101 Score = 86.0 bits (94), Expect = 1e-11 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076 ||||||| ||||| || || ||| | || ||| |||||||| |||||||||| || | Sbjct 4499049 CACTTCAGTACCTGGCTCCCTACTCTGGCTGTTACATAGGAGAGTATTTTAGAGGCAACG 4498990 Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACA 5116 | |||||||||||||||||||| |||| ||| ||||| Sbjct 4498989 GCAAACATGCTTTAATCATCTATGATGGCTTATTCAAACA 4498950 >seq97 Length=8594300 Score = 86.0 bits (94), Expect = 1e-11 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || ||||| || ||||| ||||| |||| ||| | || | | ||| | |||| Sbjct 7807799 CAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGCAGTCTGAGAGAGTGCAGCCATG 7807740 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || ||||| || | || || || || | || ||||| || | ||||| |||||||| Sbjct 7807739 CTCCAGCTGTTTGCTGGCAAACATCAGACACTGCTGGTCAGGTAGGATACCCTCCTTGTC 7807680 Query 225621 TTGGATCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCG 225679 ||| || ||| |||| ||| || |||||||| || || || || | ||||| | Sbjct 7807679 TTGAAT-TTTGGCTTTGACATTCTCAATGGTGTCACCAGTCTCGACCTCAAGGGTGATGG 7807621 Query 225680 TCTTGCCCGTCAAAGTTTT 225698 |||||||||| | ||| || Sbjct 7807620 TCTTGCCCGTGAGAGTCTT 7807602 >seq141 Length=4680182 Score = 84.2 bits (92), Expect = 5e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || ||||| || | ||||| ||| |||| ||| | || | | ||| ||||| Sbjct 4589920 CAGCACCAGGTGCAGGGCGGATTGTTTCTGGATGTTGCAGTCTGAGAGAGTGTGTCCATC 4589861 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || || || || ||||| | ||| || | || ||||| || || ||||| |||||||| Sbjct 4589860 CTCCAGTTGTTTGCCAGCAAGGATCAGATGCTGCTGGTCAGGTGGGATACCCTCCTTGTC 4589801 Query 225621 TTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCG 225679 ||| || ||| || || |||| || |||||||| || || || || | ||||| | Sbjct 4589800 TTGAAT-TTTGGCTTTGACAGTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG 4589742 Query 225680 TCTTGCCCGT 225689 |||| || || Sbjct 4589741 TCTTACCTGT 4589732 >seq63 Length=13147851 Score = 84.2 bits (92), Expect = 5e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 ||||| |||||||||||||| ||||||||||| ||||||||||| || || ||||| | Sbjct 3590159 TCAGGGTGACCAAAAAATCAAAATAAATGTTGGTAAAGGATAGGGTCACCCCCGCCAGCA 3590100 Query 370733 GGATCAAAAAA 370743 || |||||||| Sbjct 3590099 GGGTCAAAAAA 3590089 >seq1 Length=72162052 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| |||||| |||||||||||||||||||||| | |||||| || ||||| || | Sbjct 71181803 TTCAGGGTGACCAGAAAATCAGAATAAATGTTGATATAAGATAGGGTCACCTCCACCAGC 71181744 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 || ||||| || ||||||| | | | | ||||||| Sbjct 71181743 AGGGTCAAAGAAAGTAGTATTGAGGATACAAACAGTTAA 71181705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192490159784084