Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq37 374 1e-98 seq5 277 3e-69 seq111 170 3e-37 seq3 113 6e-20 seq132 111 2e-19 seq9 109 8e-19 seq1056 96.9 5e-15 >seq37 Length=19344684 Score = 374 bits (414), Expect = 1e-98 Identities = 651/939 (69%), Gaps = 16/939 (2%) Strand=Plus/Plus Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 46339 |||| ||||| || | || | |||| ||| ||| | | |||||| |||||||| Sbjct 211257 TTTAGAAGTCAGCACCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 211316 Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399 | || || | |||||| | ||||| || || ||||| || ||||||| ||| ||||| | Sbjct 211317 TCTGATACTTACCTACTCTCTTCTCAAAGAAGTTAGTGTTTCCTTCCAGTGAAATATTCT 211376 Query 46400 CCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCA 46459 ||||||| ||||| ||||| || | ||| | |||| || | ||| || | Sbjct 211377 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCCTGCTAAAACCCAGTTCCAGCATAA 211436 Query 46460 GTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCA---CAATTCATTCCTATGA 46516 |||| ||||| || || || || || || | ||||| | |||||||| || |||| Sbjct 211437 GTCTGTCTGCCACAAACTCAATGTA---TTGCTTCATTAGAGTGCAATTCATCCCAATGA 211493 Query 46517 GTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATA-TT 46575 | || || || | ||||| ||||| ||||| ||||| || |||||| | |||| || Sbjct 211494 GCTTCACAGGCAAGGCCTCAGTAAGGAACTCCTGTTCCATCCGAACAGCA-CTGATAATT 211552 Query 46576 ATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCA 46635 || | ||||| | ||||| |||| || | ||||| ||||| | || || Sbjct 211553 ATTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTTGGTGTTTGAACATCAGGCAAGCG 211612 Query 46636 AAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGC 46695 |||||||| || | || |||||||| | | | | ||| |||||||||||||| |||||| Sbjct 211613 AAATCACAGTGTAAACCCTCATCTCTGCCAGTAAGTTCATTAGAAAATGTGAGGCCAGGC 211672 Query 46696 ATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCT 46755 || ||||| || || |||||||| ||||| | || ||||| ||||||||||| |||||| Sbjct 211673 ATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCT 211732 Query 46756 TCTACAGCCGCGAATGCGACAA-GTCTCTCTCCGTAACTGGCATCATTAT---GAATCCA 46811 || || || || || || ||| || | || || || | || || || | || ||| Sbjct 211733 TCCACTGCAGCAAAGGCTGCAACGTGT-TCACCATAGGTAGCCTCTTTGTCCCCAACCCA 211791 Query 46812 CCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871 |||||||| ||||| ||||| ||||||||||| ||||| |||||||| ||||| Sbjct 211792 GAGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATAGCATTGAAGAG 211851 Query 46872 AAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGA 46931 ||| | |||| | |||||| | || || || || | |||||||| ||||| || Sbjct 211852 AAATTCCCTTTCGTTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATATATTTCAGA 211911 Query 46932 ATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTAC 46991 ||| ||||||| || ||||| || || || || ||||| ||||| || ||||| || Sbjct 211912 ATGTATGTTTTTCATGGCCATTTGGAAGCCATAGAAACAGTGGGCTTCTGTGATCTGAAC 211971 Query 46992 CTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAA 47051 ||| | |||||| || ||| || ||||| ||||| |||| ||| || ||||| || Sbjct 211972 TTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATAACTTGCTGCAAAGAA 212031 Query 47052 TGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGAT 47111 |||| || || ||||| ||| | | |||| |||| | ||||| | Sbjct 212032 AGCCAGAACGTGGGATATAAAGTATCTCCCCTCGGGCTTCAGGGATTCCCAGTGCCAAAC 212091 Query 47112 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACAT 47171 || || || | || || || | | |||||||| || ||||| | || ||||| | Sbjct 212092 GTCCTTGGACAGGTCCACCTCCTTGGTGGTCCAGAAGGAGGCCTCCCCCTTCTTATATGT 212151 Query 47172 ATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 | ||| ||||| | || | ||| || || || ||||| Sbjct 212152 CTGCCAGATATCGGGGTACTCGATGGGGAATATGACAAA 212190 >seq5 Length=50794693 Score = 277 bits (306), Expect = 3e-69 Identities = 664/995 (67%), Gaps = 32/995 (3%) Strand=Plus/Minus Query 76603 TTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGG--TTCTACGTTCT 76660 |||||| |||||||| | ||||| ||||||| ||| |||||| || | || ||||| Sbjct 46265802 TTTCATGAAGAGATCTAGAATCCAAAGAGCAAAAAA--GATCTCTGGCATGCT--GTTCT 46265747 Query 76661 TCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCT 76720 | |||||| ||||||| || | ||| | || || | || || |||| || || || Sbjct 46265746 TTCTTTCCTATATTCTTCTTTAAATCAAACAATTCAAAGATGTCTAAATGTCAAGGCTCC 46265687 Query 76721 AGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTG 76780 || || || || | | || || | || || || || |||| | ||||| || ||| Sbjct 46265686 AGGTAAATAGCAAATGCTCCAGGACCCTTGTTCCCACCTCGATCCAGATATCAAGCTGTG 46265627 Query 76781 TTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATA 76840 || ||||| ||||||| ||| | || ||| || || | || || | ||| ||| Sbjct 46265626 TTGTTATATACTCTCAGCATCAGTGCAAGGCCATTGGAATTGCCCTTAGACCCATCAATG 46265567 Query 76841 TAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAG 76900 || || ||| || | |||| ||| | || | || |||||||| || |||||| Sbjct 46265566 TAGCTGCCAGTAGCCCAAATACAACTCAAAGCAACACCAATTCCTCCAGCAGATTTAGAA 46265507 Query 76901 ATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTA 76960 || | ||||| | || | |||||||| ||||| || || || || || ||||| | Sbjct 46265506 ATCAACGCACATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCGTCTTTCATGCTC 46265447 Query 76961 AGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGAT 77020 ||||||||||||||||| | ||| | || || || ||| | || || || || || Sbjct 46265446 AGAAGAAAACAGCTAGAAAGTTGTGGGTGGTTGGTACCAGCACTGAAGAAAGTTGGTGAA 46265387 Query 77021 GCATGAGTGAACCATTTTTCAGAAAGTAGATTGT---ATGTTTCAATAACTGCTTCTATA 77077 |||||||| ||||| | |||| ||| ||| ||| ||||||||| || | || ||| Sbjct 46265386 GCATGAGTAAACCACCTCTCAGGAAGAAGACTGTCTGCTGTTTCAATTGCTACATCAATA 46265327 Query 77078 TC-CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGT 77136 || | ||| || || || |||| || | ||||||||||| ||| ||| ||| | Sbjct 46265326 TCTTCTTTGTTG-ATCCCAACAGATACTCTCATCAACATATACTGTGGTATTTCAGCCAC 46265268 Query 77137 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196 || ||| || |||||||| || || | | | ||||||||||| || ||||| Sbjct 46265267 TTTTCCATTGATCTTCAACAAATAAGACAACTGTAGCATCTTAAAACCAAAGTAATTGTA 46265208 Query 77197 TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGG---TAAC 77253 || || ||| | | |||||| | ||||| | | || ||| |||| ||| Sbjct 46265207 AGAGAAATCTTAGCCACAGATAATAGCAGAATTCAAGTGATCTTTA---TTGGCCAAAAC 46265151 Query 77254 AATATCCATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATA 77313 |||||||| | | | | | || ||||| ||| | ||| | ||| | || | Sbjct 46265150 AATATCCAGTGCTGACTTGGCCACCATGGGAGAGCGTTTGTCATGATGTGGACTTACGCA 46265091 Query 77314 GTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGA 77373 |||| | | ||||||||| || || || || | || |||||||| ||||| | || || Sbjct 46265090 GTTATAGAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGA 46265031 Query 77374 TACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGC 77433 || || | ||||| || || || |||||| |||| || | ||||| ||| Sbjct 46265030 GACAGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGTCAAGG------- 46264978 Query 77434 TATTTCTGCCG-CTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAA 77492 |||||| | ||| |||||| ||| || |||| || || | || | | ||| | Sbjct 46264977 -----CTGCCGCCAAAAATATCTAGTTCCATCATAGTGACCCCACTGTACAAGCATTGGA 46264923 Query 77493 TAACTTTCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATT 77552 | |||||||||| || | ||||| ||||| || | | |||||||| || Sbjct 46264922 TTACTTTCATGGTGATCTGAGCGGGATCAACAAAATCCACAATGAGGCCATAACA-AAGC 46264864 Query 77553 TTCT-AATACGAGATGTGATTTTATCAAACATGAC 77586 |||| || |||||| | ||||| ||||| ||||| Sbjct 46264863 TTCTGGATTCGAGATTTAATTTTGTCAAATATGAC 46264829 >seq111 Length=7367144 Score = 170 bits (188), Expect = 3e-37 Identities = 366/541 (68%), Gaps = 11/541 (2%) Strand=Plus/Plus Query 46651 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTT 46710 || ||||| || ||||| | ||| || ||||||||||| |||| ||| |||| | || Sbjct 4918147 CCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGACATCAGTCATTGTTTC 4918206 Query 46711 TTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAAT 46770 |||||||| ||||| | || ||||| |||||| |||| |||||||||| | || || Sbjct 4918207 TTGAGCCAGAATATTGATGCAAAAGAACCAGAAGAGAAGGTGCCTTCTACTGTGGCAAAG 4918266 Query 46771 GCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACCTTTGAGCCCAATCA 46827 || ||| | |||| || | ||||| || | |||||| | |||||||| Sbjct 4918267 GCTGCAACACGTTCTCTGTGGGTAGCATCTTTGTTCACAATCCAACACAAGGCCCAATCT 4918326 Query 46828 GCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCA 46887 |||| ||||| ||||||||||| |||| || || || |||||||| | |||| | Sbjct 4918327 GCCTCCTTCTTGACACAAGGCATCCTTTCGATGGCGTTGAAGAGAAATTCCCTTTCTTTG 4918386 Query 46888 CTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATA 46947 | |||||||| |||| || | || ||| ||| ||| || |||| |||||||| ||| Sbjct 4918387 TTGTCTTTAAC--ATGTGTCAGTAAAGAGATTATCCATGTCAGAATATATGTTTTCCATA 4918444 Query 46948 GCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC-TGTACAAAATCG 47006 || || || || || || || || | ||| ||| || || || || || | || | Sbjct 4918445 GCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCTTGAACTTCTTGGAC-ACATTG 4918500 Query 47007 TTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTT 47066 || ||| || | || ||||| ||| | || ||||| || | || | ||| Sbjct 4918501 CTCCACCAAGTTTTTATCAACTATGCCACGGCATGCTGCAAAGAAAGTCAGAATATGGGA 4918560 Query 47067 AATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATC 47126 ||||||||| ||| || | ||| | ||||| | || ||||| || | | Sbjct 4918561 TATAAAATATCTTTTCTCAGGCTCCAGGGCTTCCCAGTGCTGAATGTCTTTGGACAGGCC 4918620 Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186 || || | || ||||||| || |||| ||| ||||| || ||||| |||||| | Sbjct 4918621 CACCTCCTGGGCCATCCAGAAGGAAATCTCTACTTACTTATA-ATTTTCCAAATATCATG 4918679 Query 47187 A 47187 | Sbjct 4918680 A 4918680 >seq3 Length=58292249 Score = 113 bits (124), Expect = 6e-20 Identities = 206/297 (69%), Gaps = 15/297 (5%) Strand=Plus/Plus Query 44408 AGATTGTACTTCCTCTAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCT 44467 || ||| ||||| |||| || || ||| | || |||| | | || ||||| || |||| Sbjct 29419078 AGCTTGAACTTCTTCTATTTCTGGGTAAAAAATCCGTTCACAAATGAGTTGTGCAATTCG 29419137 Query 44468 ATCACCTGTATTTATTTTAAAGGTATCTTTTCCATTATTGATCAAAATTACTCCAATGTT 44527 |||| || | || | || ||| | ||||| ||| ||| | || || |||| ||| Sbjct 29419138 ATCATCTTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTGCAACACCAACGTT 29419197 Query 44528 CCCCCTATAATCTTCATCTATTACTCCACCTCCCACATCAATA---CCTTTTAGAGAAAG 44584 || ||||||||||||||||| || ||| |||| ||||||||| |||| || | Sbjct 29419198 TCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTTCAGCCAA 29419257 Query 44585 ACCCGATCTAGGCGCTATTCTTCCATAA----CAGAATTTTGGCATAGACATACGAATAT 44640 || || | ||| |||| |||||| ||| ||||| || | | || | || | Sbjct 29419258 GCCAGACCGAGGAGCTACTCTTCCGTAACACCCAGAA----GGAAGCGCTATCTGTATGT 29419313 Query 44641 CTGTTTTAATCAACCGTCTTTCTCC--AGGAGGGATAGTATAATCGTAAGCACTGTA 44695 ||||||| | ||| | | |||||| ||| ||||| || ||||| || |||||||| Sbjct 29419314 CTGTTTTCA-CAAGAG-CCTTCTCCATAGGTGGGATTGTGTAATCATAGGCACTGTA 29419368 >seq132 Length=5918258 Score = 111 bits (122), Expect = 2e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 |||||||||| || || | ||| || ||||| ||||| || ||||| || || | ||| | Sbjct 980252 CTTCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCT 980193 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 | ||||| |||||||| || |||||||| || ||||| | ||||||||||| ||||| | Sbjct 980192 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGG 980133 Query 46772 CGACAAGTCTCTCTCC 46787 | || | ||| || || Sbjct 980132 CCACCACTCTTTCCCC 980117 >seq9 Length=44311105 Score = 109 bits (120), Expect = 8e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | ||| Sbjct 1878115 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATAGAC 1878174 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| || |||| || |||||||| ||||| || ||||| || || | | |||||| Sbjct 1878175 TCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAACTG 1878234 Query 75842 TTTCTGAGACCAT 75854 ||||| | ||||| Sbjct 1878235 TTTCTTATACCAT 1878247 Score = 102 bits (112), Expect = 1e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || || | ||| |||||||| ||||| | || || ||||| || || || || || || Sbjct 1910900 CTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTGGCTGCCAGGATA 1910959 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 |||||||||||||| | ||||| |||| || ||| |||| || || |||||||||| | Sbjct 1910960 GCATAGTCAGGATGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGT 1911019 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | || || || || | || | ||||| || || ||||||| Sbjct 1911020 TCCACCGTGGTGACCCCACTGTACAAGCCTTGGATTACCTTCATGG 1911065 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| || | || || || |||||||| ||||| | |||||||| ||||| Sbjct 1904752 GTACCAGCATTGAAGAGAGTGGGCGAAGCATGAGTAAACCACCTCTCAGAAAGAAGATTA 1904811 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 ||||||||||| |||| || || || || || || || |||| || | ||||||| Sbjct 1904812 TATGTTTCAATTGCTGCATCAATGTCTTCTTTGTGGATCCCAACAGACACTCTCATCAAC 1904871 Query 77114 ATATGCTGAGGTCGTTC 77130 |||||||| |||| ||| Sbjct 1904872 ATATGCTGTGGTCTTTC 1904888 Score = 86.0 bits (94), Expect = 9e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 75934 TCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTC 75993 ||| |||||| | || || | ||| ||||| || | || | || | || || || Sbjct 1883199 TCCTTTGCTAACGGGAGAGCCCTCATAGGTTTCATATGGTCCATGCTCCTTGGCAAGGTC 1883258 Query 75994 GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATT-AAGATCTT 76052 || || || || | || ||||||||||| ||||| || |||| |||||| || | | | Sbjct 1883259 ACAGCTGGCTTCCAGGGCTCCGTAATAAATAGTTTCAAAGATCTGCTTATTCAATAAC-T 1883317 Query 76053 GCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAA 76112 | ||||| ||| |||||||| || | || ||||| |||||||| || || || | Sbjct 1883318 GGGCTTCTGCACTCTCAAAAGGGTATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTA 1883377 Query 76113 CTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146 | ||||| ||||| || | ||| | ||||| || Sbjct 1883378 CCCCAATTCCAATGGGGCGATGACGTTTATTTGA 1883411 Score = 86.0 bits (94), Expect = 9e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| ||||||||||| ||||||| ||||||||| ||||| ||||||||||| ||| Sbjct 1895562 TCAAATTCTTCTCCCCAAACCTCATCCAGACCAGGACACTCATTTGGACACATCAAAGAC 1895621 Query 76580 CACTC 76584 || || Sbjct 1895622 CAGTC 1895626 >seq1056 Length=1934 Score = 96.9 bits (106), Expect = 5e-15 Identities = 217/321 (68%), Gaps = 15/321 (5%) Strand=Plus/Plus Query 44402 ATCTAGAGATTGTACTTCCTCTAGATCAGGATAATATATACGTTGATAGATTAGTTGAGC 44461 ||| | || ||| ||||| |||| || || ||| | || |||| | | || || || || Sbjct 724 ATCCAAAGCTTGAACTTCTTCTATTTCTGGGTAAAAAATCCGTTCACAAATGAGCTGTGC 783 Query 44462 TATTCTATCACCTGTATTTATTTTAAAGGTATCTTTTCCATTATTGATCAAAATTACTCC 44521 |||| ||| | | | || | || ||| | ||||| ||| ||| || | || || Sbjct 784 AATTCGATCCCTTTTTTTGACTTCAAACTTTTCTTTGCCAAAATTATACAGCACAACACC 843 Query 44522 AATGTTCCCCCTATAATCTTCATCTATTACTCCACCTCCCACATCAATA---CCTTTTAG 44578 || || || ||||||||||||||||| || ||| |||| ||||||||| |||| Sbjct 844 AACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGC 903 Query 44579 AGAAAGACCCGATCTAGGCGCTATTCTTCCATAA----CAGAATTTTGGCATAGACATAC 44634 || | || || | || |||| |||| ||||| ||||| || | || Sbjct 904 AGCCAAGCCAGACCGTGGAGCTACTCTTTCATAACACCCAGAA----GGAAGCACTATCT 959 Query 44635 GAATATCTGTTTTAATCAACCGTCTTTCTCC--AGGAGGGATAGTATAATCGTAAGCACT 44692 | || |||||||| | ||| || ||||||| ||| ||||| || ||||| || ||||| Sbjct 960 GTATGTCTGTTTTCA-CAAGAGT-TTTCTCCATAGGTGGGATTGTGTAATCATAGGCACT 1017 Query 44693 GTATAAATCATATCCTGCCGC 44713 ||| | || || || || || Sbjct 1018 GTACAGGTCGTAGCCCGCGGC 1038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712910463227520