Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq345281 96.9 3e-15 >seq345281 Length=2749 Score = 96.9 bits (106), Expect = 3e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 18960 GATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAAC 19019 ||| |||| | |||| || |||||||| || || | || ||||| ||||| | | Sbjct 2462 GATCTCCCTCTGATGGCGCTGCCTCCATGCCATGCGCTCTGCCAGTTCTACGTGGTGGAT 2521 Query 19020 GGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTC 19079 ||||| | |||||||| | |||||||| || || || |||||||| || || || ||| Sbjct 2522 GGTGAGCTGTCCTGCCAGCTCTACCAGAGGTCAGGAGACATGGGCCTGGGCGTGCCCTTC 2581 Query 19080 AACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 |||||||| | ||||| || || || || || | || || | ||||| ||||| Sbjct 2582 AACATTGCCAGCTATGCCCTGCTCACGTATATGATTGCACACATCACAGGCCTTAA 2637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395409179631270