Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq749787 95.1 2e-14 seq790655 89.7 8e-13 seq350439 89.7 8e-13 seq325611 89.7 8e-13 seq270171 87.8 3e-12 seq742764 86.0 9e-12 seq697174 86.0 9e-12 seq667311 86.0 9e-12 seq394655 86.0 9e-12 seq269331 86.0 9e-12 seq611773 84.2 3e-11 >seq749787 Length=1786 Score = 95.1 bits (104), Expect = 2e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 10429 TTCCTAAAGGATGTTATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAATAAATTTA 10488 ||||| || ||||||| |||| ||||||| | |||| || ||| ||| | || Sbjct 1627 TTCCTTCTGGGTGTTATGGAAGAGTAGCTCCATGTTCTGGCTTGGCTGCAAAACACTTCG 1568 Query 10489 TTGATATTGGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTAT 10548 | ||| | |||||||| || || || |||||||||||||||||||| || || || ||| Sbjct 1567 TAGATGTAGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAATGTTGGTGTTGTACTAT 1508 Query 10549 TTAATCATTCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAATTAATAT 10608 ||||| | || ||| | ||| | | || | ||| || |||| | || | || | Sbjct 1507 TTAATTTTGGCAAAGAAAAGTTTGAAGTTAAAAAAGGTGACCGAATTGCACAGCTCATTT 1448 Query 10609 GTGAAAAAATTTTATATCCTAAAAT 10633 ||||| |||||| || || |||| Sbjct 1447 GTGAACGAATTTTTTACCCAGAAAT 1423 >seq790655 Length=1746 Score = 89.7 bits (98), Expect = 8e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 || |||||||| || | ||| ||||| |||||||| || ||||||||||||| |||| Sbjct 1178 ATGTTATAATCAGACAAAGTATGCCTATCTTCTAATTGCTTGCCAGCAAAAATCAGTCTT 1119 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 ||| |||| ||||||||| ||||| |||| || Sbjct 1118 TGCCGATCAGGAGGAATTTCTTCTATATCCTG 1087 >seq350439 Length=8302 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | |||||| || | | ||| | || || || || || || || || || Sbjct 6635 CCACCACAAAGTCTCAACATAAGATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAC 6576 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || || | ||| || || ||||| ||||||||||||| |||||||||||| |||||| Sbjct 6575 AAGGTACTCCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGA 6516 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||| ||||| || Sbjct 6515 ATTCCTTCCTTATCCTG 6499 >seq325611 Length=6228 Score = 89.7 bits (98), Expect = 8e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | |||||| ||||| | ||| | || || || || || || || || || Sbjct 664 CCACCACGAAGTCTCAATACAAGATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAC 605 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | | ||| || || ||||| ||||||||||||| |||||||||||| |||||| Sbjct 604 AAAGCACGCCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGA 545 Query 146171 ATTCCTTCTTTA 146182 |||||||| ||| Sbjct 544 ATTCCTTCCTTA 533 >seq270171 Length=3188 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 146060 AGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTG 146119 ||||| || || | ||| | || || || || || || || || || | ||| | Sbjct 2536 AGTCTCAACACAAGATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTACGC 2477 Query 146120 CTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCT 146179 | ||| || || ||||| ||||||||||||| |||||||||||| |||||||||||||| Sbjct 2476 CCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 2417 Query 146180 TTATCTTG 146187 ||||| || Sbjct 2416 TTATCCTG 2409 >seq742764 Length=2195 Score = 86.0 bits (94), Expect = 9e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| ||||||||| || | ||| | || || || || || || || || || Sbjct 1624 CCACCATGAAGTCTTAACACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1565 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||| | ||| || || ||||| ||||||||||||| |||||||||||| |||||| Sbjct 1564 AAAGTATGCCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCGGGAGGA 1505 Query 146171 ATTCCTTCTTTA 146182 |||||||| ||| Sbjct 1504 ATTCCTTCCTTA 1493 >seq697174 Length=16667 Score = 86.0 bits (94), Expect = 9e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 || || || || || | ||| | | ||| || || ||||| ||||||||||||| |||| Sbjct 11285 ATGTTGTAGTCAGACAAAGTACGCCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTT 11344 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||||||| |||||||||||||| ||||| || Sbjct 11345 TGCTGATCAGGAGGAATTCCTTCCTTATCCTG 11376 >seq667311 Length=5630 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | |||||| || || | ||| | || || || || || || || || || Sbjct 4147 CCACCACGAAGTCTCAACACAAGATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAC 4206 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||| | | ||| || || ||||| ||||||||||||| |||||||||||| | |||| Sbjct 4207 AAAGTACGCCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGAAGGA 4266 Query 146171 ATTCCTTCTTTATCTTG 146187 ||| |||| ||||| || Sbjct 4267 ATTTCTTCCTTATCCTG 4283 >seq394655 Length=1474 Score = 86.0 bits (94), Expect = 9e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 || || || || || | ||| | | ||| || || ||||| ||||||||||||| |||| Sbjct 1444 ATGTTGTAGTCAGACAAAGTACGCCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTT 1385 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||||||| |||||||||||||| ||||| || Sbjct 1384 TGCTGATCAGGAGGAATTCCTTCCTTATCCTG 1353 >seq269331 Length=2190 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | |||||| || || | ||| | || || || || || | || || || Sbjct 926 CCACCACGAAGTCTCAACACAAGATGAAGTGTGGACTCCTTTTGGATGATGTAGTCAGAC 867 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||| | | ||| || || ||||| ||||||||||||| |||||||||| | |||||| Sbjct 866 AAAGTACACCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGAACAGGAGGA 807 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||| ||||| || Sbjct 806 ATTCCTTCCTTATCCTG 790 >seq611773 Length=2016 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| |||||| || || | ||| | || || || || || || ||||| || Sbjct 1461 CCACCAGGAAGTCTCAACACAAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAGAC 1520 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||| | | ||| || || || || |||||||||||| |||||||||||| |||||| Sbjct 1521 AAAGTACGCCCATCTTCCAACTGCTTGGCAGCAAAAATCAGTCTTTGCTGATCAGGAGGA 1580 Query 146171 ATTCCTTCTTTATC 146184 |||||||| ||||| Sbjct 1581 ATTCCTTCCTTATC 1594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735710022955520