Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq631619 102 2e-16 >seq631619 Length=7703 Score = 102 bits (112), Expect = 2e-16 Identities = 177/255 (69%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 94791 TCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAAT 94850 ||||||||||| ||| || || | || | ||| |||||||||||||| || ||||| Sbjct 3045 TCCTCCAGCAGACTTAGAAATCAAAGCACATTGCTTTAGAGTATCATAAATCCCTTCAAT 3104 Query 94851 GCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACT-GTTCCAC 94909 ||| ||||||| | || ||||||||| | | ||||||| || | || | || ||| Sbjct 3105 GCTGTCATCTTTCATGCTCAGAAGGAAATAGGTAGAAAGTTCTGG-GCGATTGGTGCCAG 3163 Query 94910 AATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTT 94969 ||| || || ||||| || ||||| || || | | | || | || | || ||||| Sbjct 3164 CATTGAAGAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGAAAGAAGGTTATCTGTTT 3223 Query 94970 CAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCT 95029 |||| ||| | |||||| | |||||| || |||| || | ||| | ||||| | Sbjct 3224 CAATTGCAGCATCAATGTCTTCTTTGTGAATCCCCACAGATACCCTCATCAACATGTGTT 3283 Query 95030 GAGGGCGCTCAACCA 95044 | || | ||| ||| Sbjct 3284 GCGGTCTGTCAGCCA 3298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 978920847080730