Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq611773 84.2 1e-11 >seq611773 Length=2016 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 33157 CAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC 33216 |||||| | ||| | || ||||| ||||| || ||||||||||||||| | | || Sbjct 1475 CAACACAAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAGACAAAGTACGCCCATC 1534 Query 33217 ATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC 33276 ||||| ||||| || ||| || | | |||||| || | || || ||||| || || Sbjct 1535 TTCCAACTGCTTGGCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 1594 Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336 | || |||||| ||| || || | | |||| ||| || || || || || Sbjct 1595 CTTGATTTTGGCTTTTACATTTTCTATTGTATTTTACGGTTCAACCTCAAGGGTGATGGT 1654 Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 || || || || ||||||| |||||| ||||| || Sbjct 1655 CTTCCCTGTGAGGGTTTTTATGAAAATCTGCATCTT 1690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 315510205907388