Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq732468 95.1 8e-15 seq345281 91.5 1e-13 >seq732468 Length=3300 Score = 95.1 bits (104), Expect = 8e-15 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 25781 TGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTT 25840 |||| ||||| || |||| ||||||||||| || || || || || | ||| || |||| Sbjct 2557 TGTATTCTGCCCCAAAATGTCTCCACTGGAAGCCATAAACAGGACCCAAGTCGCCTTCTT 2498 Query 25841 CCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCT 25900 | ||| || ||| | ||||||||||||| || |||||||| |||||||| | Sbjct 2497 CTCTGGTGGAGAATCCCTGGCTGTCCAAAAAGTCTCGAGATCCATTGGCATCCCAGATTT 2438 Query 25901 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 | || ||||| || || || |||| ||||||||| || Sbjct 2437 TCACTCCCTTAGAAGATAGTTCCTTGGCGTTTGTGGATCC 2398 >seq345281 Length=2749 Score = 91.5 bits (100), Expect = 1e-13 Identities = 111/150 (74%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || ||||| |||||||| || |||||||| ||||| ||||| || || | |||||| Sbjct 2619 GCAATCATATACGTGAGCAGGGCATAGCTGGCAATGTTGAAGGGCACGCCCAGGCCCATG 2560 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 || || ||||||||||||||||| || || ||||| | || |||||| ||||| || Sbjct 2559 TCTCCT-GACCTCTGGTAGAGCTGGCAGGACAGCTCACCATCCACCACGTAGAACTGGCA 2501 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 | | | ||| ||||| || || || || Sbjct 2500 GAGCGCATGGCATGGAGGCAGCGCCATCAG 2471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 336651271020438