Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08]
841,006 sequences; 2,137,225,476 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq345138 109 5e-19
seq335148 100 2e-16
>seq345138
Length=2957
Score = 109 bits (120), Expect = 5e-19
Identities = 156/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 24991 ACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGG 25050
||| || ||||| || || || ||||| ||| || || ||||||| |||| || |
Sbjct 2549 ACGCAAAGATGCAGATCTTCGTGAAGACCCTGATGGGCAAGACCATCACCCTCGAGGTCG 2490
Query 25051 AGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110
|| | |||||| |||||| | ||| |||||| ||||| || || || || |
Sbjct 2489 AGCCCAGTGACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAGGAGGGCATCCCCC 2430
Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170
||||||| ||||| | || |||||||||||||| || || |||| ||||| || |
Sbjct 2429 CTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGTTGGAGGATGGCCGCACGCTGTCTG 2370
Query 25171 ATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| ||||| || || ||||| ||||| || || | |||||
Sbjct 2369 ACTACAACATCCAGAAAGAGTCCACCCTCCACCTGGTGCT 2330
>seq335148
Length=7748
Score = 100 bits (110), Expect = 2e-16
Identities = 154/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 24991 ACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGG 25050
||| || ||||| || || || ||||| |||| || || ||||||| || | ||
Sbjct 7313 ACGCAAAGATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCAAGGTCA 7254
Query 25051 AGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110
| | |||||| |||||| | ||| |||||| ||||| || || || ||||
Sbjct 7253 GGCCCAGTGACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAGGAGGGCATCCCAC 7194
Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170
|| |||| ||||| | || |||||||||||||| | ||||||| |||||| | |
Sbjct 7193 CTAACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTTTCTG 7134
Query 25171 ATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| || || || || ||||| ||||| || ||| | |||||
Sbjct 7133 ACTATAACATCCAGAAAGAGTCCACCCTCCATCTGGTGCT 7094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428886491727890
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |