Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq345138 127 2e-24 seq235349 125 8e-24 seq198121 122 1e-22 seq335148 118 1e-21 seq416377 116 4e-21 seq713515 105 7e-18 seq364364 102 9e-17 >seq345138 Length=2957 Score = 127 bits (140), Expect = 2e-24 Identities = 170/235 (72%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| |||| | ||||| |||||| || | || ||| || ||||| |||||||| | Sbjct 2313 TGCCACCTCGCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAG 2372 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || | ||| |||||||| ||||||| ||||||||||| | | Sbjct 2373 ACAGCGTGCGGCCATCCTCCAACTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGG 2432 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| ||| || ||||| || | | ||||| || | || | Sbjct 2433 GGATGCCCTCCTTGTCTTGGATTTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGA 2492 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT-TTTGC 46598 | || | |||||||| |||||| |||| || || || ||||| ||||| ||||| Sbjct 2493 CCTCGAGGGTGATGGTCTTGCCCATCAGGGTCTTCACGAAGATCTGCATCTTTGC 2547 >seq235349 Length=927 Score = 125 bits (138), Expect = 8e-24 Identities = 172/237 (73%), Gaps = 5/237 (2%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCA--ATGTACTCTCCTTTTGGATATTGTAGTC 46422 |||| |||| | || || ||||||||||| || |||||| | ||||| |||||||| Sbjct 30 TGCCACCTCGCAGACACAGCACCAGATGCAGGGTGGACTCTC--TCTGGATGTTGTAGTC 87 Query 46423 GGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGC 46482 || | |||||| | || || ||||| ||||| || ||||||| | |||||||||||| Sbjct 88 AGAGACAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAATATCAGGTGCTGCTGGTCGGG 147 Query 46483 CGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTC 46542 | | || ||||||||| | | || ||||| || | | ||||| || || || Sbjct 148 TGAGATGCCCTCCTTGTCTTGGGTTTTGGCCTTGACATTCTCAATGGTGTCACTGGACTC 207 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT-TTTGC 46598 || || | |||||||| ||||| ||||| || || | ||||| ||||| ||||| Sbjct 208 GACCTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCATGAAGATCTGCATCTTTGC 264 >seq198121 Length=2544 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| | ||| | ||||| |||| || ||| || ||||| ||||||||||| Sbjct 468 CCACCTCGGAGACGGAGAACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 409 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || ||||| || ||||| || ||||| | ||||||||| | || Sbjct 408 AGGGTGCGTCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 349 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||| ||||||| ||||| || | | ||||| || | || || Sbjct 348 ATGCCTTCCTTGTCTTGGATCTTCGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACC 289 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||| ||||| ||||| || || || ||||| ||||| Sbjct 288 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 242 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| | ||| | ||||| |||| || ||| || ||||| ||||||||||| Sbjct 696 CCACCTCGGAGACGGAGAACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 637 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || ||||| || ||||| || ||||| | ||||||||| | || Sbjct 636 AGGGTGCGTCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 577 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||| ||||||| ||||| || | | ||||| || | || || Sbjct 576 ATGCCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACC 517 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||| || || ||||| || || || ||||| ||||| Sbjct 516 TCAAGGGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 470 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| | ||| | ||||| |||| || |||||| ||||| ||||||||||| Sbjct 1154 CCACCTCGGAGACGGAGTACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1095 Query 46427 AGAGTGCGCTCGTCGTCG-AGCTGCTTGCCGGCGAATATCAAGCG-CTGCTGGTCGGCCG 46484 || ||||| | || || ||||| || ||||| || ||||| | ||||||||||| | Sbjct 1094 AGGGTGCGTCCATCTTCCCAGCTGTTTCCCGGCAAAGATCAACCCTCTGCTGGTCGGGAG 1035 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | |||||||| ||||||| ||||| || | | ||||| || | || | Sbjct 1034 GGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAA 975 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | || ||||| || || || || || || || ||||| ||||| Sbjct 974 CCTCGAGGGTAATGGTCTTACCAGTAAGGGTCTTCACGAAGATCTGCAT 926 >seq335148 Length=7748 Score = 118 bits (130), Expect = 1e-21 Identities = 165/230 (72%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 46370 CCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGA 46429 |||| | ||||| ||||||||| | || ||| || ||||| || ||||| || ||| Sbjct 7082 CCTCGCACACGCAGCACCAGATGGAGGGTGGACTCTTTCTGGATGTTATAGTCAGAAAGA 7141 Query 46430 GTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACG 46489 ||||| | || || ||||| |||||||| ||||||| |||||||||| | || | | Sbjct 7142 GTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTTAGGTGGGATG 7201 Query 46490 CTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCC 46549 | ||||||||| ||| || ||||| || | | ||||| || | || | Sbjct 7202 CCCTCCTTGTCTTGGATTTTGGCCTTGACATTCTCGATGGTGTCACTGGGCCTGACCTTG 7261 Query 46550 ACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT-TTTGC 46598 | |||||||| ||||||||||| || || || ||||| ||||| ||||| Sbjct 7262 AGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTTGC 7311 >seq416377 Length=912 Score = 116 bits (128), Expect = 4e-21 Identities = 170/237 (72%), Gaps = 5/237 (2%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGT--ACTCTCCTTTTGGATATTGTAGTC 46422 |||| |||| | ||||| |||||| || | || |||||| | ||||| |||||||| Sbjct 551 TGCCGCCTCGCAGACGCAGCACCAGGTGGAGGGTGGACTCTC--TCTGGATGTTGTAGTC 494 Query 46423 GGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGC 46482 || | |||||| | || || ||||| ||||| || ||||||| | |||||||||||| Sbjct 493 AGAGACAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAATATCAGGTGCTGCTGGTCGGG 434 Query 46483 CGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTC 46542 | | || ||||||||| | | || ||||| || | | ||||| || || || Sbjct 433 TGAGATGCCCTCCTTGTCTTGGGTTTTGGCCTTGACATTCTCAATGGTGTCACTGGACTC 374 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT-TTTGC 46598 || || | |||||||| ||||| ||||| || || | ||||| ||| | ||||| Sbjct 373 GACCTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCATGAAGATCTGCGTCTTTGC 317 >seq713515 Length=817 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || | ||| | ||||| |||| ||| ||| || || || |||||||| || Sbjct 412 GCCACCCCTCAGACGGAGGACCAGGTGCAGAGTAGACTCTTTCTGAATGTTGTAGTCAGA 471 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||||| | || || ||||||||||| || || || | | |||||| || | || Sbjct 472 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGATCAGGAGG 531 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || || || ||| |||||| ||| | || | | ||||| || | ||||| Sbjct 532 GATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 591 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||| ||||| ||||| || || || ||||| ||||| Sbjct 592 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 639 >seq364364 Length=1710 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46406 TTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 46465 || |||||||||||||| || |||||||| | || || ||||||||||| || || || Sbjct 1223 TTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATG 1282 Query 46466 AAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC 46525 | ||||||||| | || | || || || ||| |||||| ||| | | || || Sbjct 1283 CGCCTCTGCTGGTCAGGGGGTATGCCTTCTTTATCCTGGATCTTAGCCTTCA-CATCCCC 1341 Query 46526 -ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAA 46584 | ||||| || | ||||| || | |||||| | ||||| |||| | |||||||| Sbjct 1342 AATGGTGTCACTGGGGTCCACCTCTAGGGTGATGCTCTTGCCAGTCAAGGACTTAACAAA 1401 Query 46585 GATTTGCATTTTG 46597 ||| ||||||||| Sbjct 1402 GATCTGCATTTTG 1414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559296288927120