Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq701239 123 3e-23 >seq701239 Length=2016 Score = 123 bits (136), Expect = 3e-23 Identities = 183/259 (71%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 2206 AACTGAAGAACATTCAGGTGAGCAATCACAGTCAACTGTCTCAGAATCGGATCTGCGAGA 2265 |||| |||||||| || || | |||||||| ||| |||| |||| ||| ||| |||| Sbjct 893 AACTAAAGAACATACAAGTTACCAATCACACTCAGTGGTCTGAGAACGGGACCTGTGAGA 834 Query 2266 TCCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCAAATGGGAGGCCT 2325 |||| ||| |||| | | ||| || | ||||| ||| ||||| ||| ||||| Sbjct 833 TCCAACTGGCCTGCTGGGCGGAGAATTCA---GACAATGACTCATTCAAGTGGCAGGCCC 777 Query 2326 TGGGCAAGACGCTTCTACGCGAGCCCAACCTCACGACCTCCTGGGACCCCAGGAACAGCA 2385 || | | | | ||| | || ||||| || |||||||||| |||||||| | Sbjct 776 CAGGAATGTCACCTCTGAATGGACCAAACCTTACTGCCTCCTGGGATCCCAGGAATTCTA 717 Query 2386 GTGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAGCAATCTCTCTTTCACGGTCT 2445 | || ||||||||||| |||| ||| || ||| | | |||||| | ||| | |||| Sbjct 716 GCGAACAGAACTACACATGCAACGCTGAGAACCCCATCAGCAATTTGAGCTTCTCCGTCT 657 Query 2446 CGGCCCAGAAGCTGTGTGA 2464 | ||||||| ||| ||||| Sbjct 656 CTGCCCAGAGGCTCTGTGA 638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622667813163760