Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq742764 113 4e-20 seq449898 113 4e-20 seq713515 105 5e-18 seq377023 100 2e-16 seq185875 93.3 3e-14 seq185854 93.3 3e-14 seq192678 86.0 5e-12 seq184549 86.0 5e-12 >seq742764 Length=2195 Score = 113 bits (124), Expect = 4e-20 Identities = 154/214 (72%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 101257 TAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATC 101316 ||| || | |||||| || || || ||||| || ||||| || | | ||| |||| Sbjct 1610 TAACACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTATGCCCATC 1551 Query 101317 GTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATC 101376 ||||| || || || ||||| |||| | || |||||||| ||||| ||||| ||| | Sbjct 1550 TTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCGGGAGGAATTCCTTCCTTACC 1491 Query 101377 TTGAATTTTTTGTTTTACAATTTCTACAGTGTC-AGACGTTTCCACTTCAAGAGTGACCG 101435 || ||||| ||||||| |||||| || || | | | ||| || || || |||| | Sbjct 1490 CTGGATTTTGGCTTTTACATTTTCTATTGTATCCAAAGGGTTCAACCTCTAGGGTGAGGG 1431 Query 101436 TTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || || || | ||||||||||| |||||||| Sbjct 1430 TCTTCCCTGTAAGGGTTTTTACAAAAATCTGCAT 1397 >seq449898 Length=3288 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || || | |||||| || || || ||||| || ||||| || | | ||| | |||| Sbjct 1249 AACACAAGATGAAGCGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGCCCATCT 1308 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 ||||| || || || | ||| |||| | || ||||| || ||||| | ||| ||||| Sbjct 1309 TCCAACTGTTTGCCAGAAAAAATCAGTCTTTGCTGATCAGGAGGAATTCTTTCCTTATCC 1368 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || ||||| ||||||| |||||| || || | || ||| || || || |||| || Sbjct 1369 TGGATTTTGGCTTTTACATTTTCTATTGTATCCGGCGGTTCAACCTCGAGGGTGATGGTC 1428 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | ||||||||||| |||||||| Sbjct 1429 TTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 1460 >seq713515 Length=817 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || ||||| ||||| || || ||||| || | | ||| | | |||| |||| ||| Sbjct 437 TGCAGAGTAGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGC 496 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || |||||||| || | | ||| ||||| || || |||||||||||||| || || || Sbjct 497 TTGCCTGCAAAGATGAGCCTCTGCTGATCAGGAGGGATGCCTTCTTTATCCTGGATCTTG 556 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | ||||| || || |||| || |||||||| Sbjct 557 GCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCGGTC 616 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 617 AGGGTCTTCACGAAGATCTGCAT 639 >seq377023 Length=3771 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| || || || ||||| || ||||| || | | ||| |||| ||||| || Sbjct 1685 TGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTATGCCCATCTTCCAACTGT 1744 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| | || ||||| || |||| ||||| ||||| || ||||| Sbjct 1745 TTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAAGAATTCCTTCCTTATCCTGGATTTTG 1804 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||||||| |||||| || || || ||| || | || |||| || || || || Sbjct 1805 GCTTTTACATTTTCTATTGTATCCGATAGTTCAACCCCGAGGGTGATGGTCTTCCCTGTG 1864 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||||||||| |||||||| Sbjct 1865 AGGGTTTTTACAAAAATCTGCAT 1887 >seq185875 Length=1413 Score = 93.3 bits (102), Expect = 3e-14 Identities = 115/157 (73%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372 |||| | ||| ||||| || ||||| ||| | | ||| ||||| || |||| ||||| | Sbjct 319 CATCTTTCAACTGCTTGCCAGCAAAAATCGATCTCTGCTGATCAGGAAGAATTCCTTCCT 378 Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432 |||| || ||||| ||||||| |||||| || || |||| || | ||||| |||| Sbjct 379 TATCCTGGATTTTGGCTTTTACATTTTCTATTGTATCCGACGGTTTC---TCAAGGGTGA 435 Query 101433 CCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | | | ||||||||||| |||||||| Sbjct 436 TGGTCTTCCTCATAAGGGTTTTTACAAAAATCTGCAT 472 >seq185854 Length=2443 Score = 93.3 bits (102), Expect = 3e-14 Identities = 115/157 (73%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372 |||| | ||| ||||| || ||||| ||| | | ||| ||||| || |||| ||||| | Sbjct 865 CATCTTTCAACTGCTTGCCAGCAAAAATCGATCTCTGCTGATCAGGAAGAATTCCTTCCT 924 Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432 |||| || ||||| ||||||| |||||| || || |||| || | ||||| |||| Sbjct 925 TATCCTGGATTTTGGCTTTTACATTTTCTATTGTATCCGACGGTTTC---TCAAGGGTGA 981 Query 101433 CCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | | | ||||||||||| |||||||| Sbjct 982 TGGTCTTCCTCATAAGGGTTTTTACAAAAATCTGCAT 1018 >seq192678 Length=701 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372 |||| |||| || || || |||| ||| | | ||||| || ||||| | ||| | Sbjct 556 CATCTTCCATCTGTTTGCCAACAAAAGTCAGTCTATTCTGATCAGGAGGAATTCATTCCT 497 Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432 |||| || ||||| |||||||| |||||| || | || | ||| |||| ||||||| Sbjct 496 TATCCTGTATTTTGAGTTTTACATTTTCTATTGTATGCGATGGTTCAACTTTGAGAGTGA 437 Query 101433 CCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | ||||||||||| |||||||| Sbjct 436 TGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 400 >seq184549 Length=930 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 || || || | |||||| | || || |||| || ||||| || | | ||| | || Sbjct 449 CGCAACACAAGATGAAGCATGGACTCCCTTTGGATGTTGTAGTCAGACA-AGTACGTCCA 507 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || ||||| || || || ||||| ||| || || ||||| || ||||| ||||| ||| Sbjct 508 TCTTCCAACTGTTTGCCAGCAAAATTCAGTCGTTGCTGATCAGGAGGAATTCCTTCCTTA 567 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 || | |||||| ||||||||||||| || || ||| ||| | || || |||| Sbjct 568 TCCTAAATTTTGGCGTTTACAATTTCTATTGTATCTGACAGTTCAGCCTCGAGGGTGATG 627 Query 101435 GTTTTGCCGGTTAAAG-TTTTTACAAATATCTGCAT 101469 || | || || | | |||||| || |||||||| Sbjct 628 GTCTACCCTGTAAGGGTTTTTTATGAAAATCTGCAT 663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392216641259142