Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq611773 98.7 7e-16 seq270171 98.7 7e-16 seq449898 95.1 9e-15 seq345138 95.1 9e-15 seq651517 89.7 4e-13 seq335148 86.0 5e-12 seq808566 84.2 2e-11 seq449207 84.2 2e-11 seq689114 82.4 6e-11 >seq611773 Length=2016 Score = 98.7 bits (108), Expect = 7e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 |||||| | ||| |||||| ||| ||||| || ||||||||||| | | | || | || Sbjct 1475 CAACACAAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAGACAAAGTACGCCCATC 1534 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||||||||| | ||||| ||||||| || ||||| | |||| || ||||| || Sbjct 1535 TTCCAACTGCTTGGCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 1594 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 | || || ||||||| | | | | | ||| || ||||| | || || || Sbjct 1595 CTTGATTTTGGCTTTTACATTTTCTATTGTATTTTACGGTTCAACCTCAAGGGTGATGGT 1654 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || || | ||||||| |||||||||||| || Sbjct 1655 CTTCCCTGTGAGGGTTTTTATGAAAATCTGCATCTTG 1691 >seq270171 Length=3188 Score = 98.7 bits (108), Expect = 7e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 |||||| | ||| |||||| ||| ||||| || ||||| ||||| | | | || | || Sbjct 2531 CAACACAAGATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTACGCCCATC 2472 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||||||| || || ||||| ||||||| || ||||| | |||| || ||||| || Sbjct 2471 TTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 2412 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 || || ||||||| | | | || |||| || ||||| | || || || Sbjct 2411 CTGGATTTTGGCTTTTACATTTTCTATTGTATCCGACGGTTCAACCTCGAGGGTGATGGT 2352 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || || | |||||||| |||||||||||| || Sbjct 2351 CTTCCCTGTGAGGGTTTTTACGAAAATCTGCATCTTG 2315 >seq449898 Length=3288 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 |||||| | ||| |||||| ||| |||||||| ||||| ||||| | | | || | || Sbjct 1248 CAACACAAGATGAAGCGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGCCCATC 1307 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||||||| || || | ||| ||||||| || ||||| | |||| | ||||| || Sbjct 1308 TTCCAACTGTTTGCCAGAAAAAATCAGTCTTTGCTGATCAGGAGGAATTCTTTCCTTATC 1367 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 || || ||||||| | | | || | || || ||||| | || || || Sbjct 1368 CTGGATTTTGGCTTTTACATTTTCTATTGTATCCGGCGGTTCAACCTCGAGGGTGATGGT 1427 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || || | ||||||||||||||||||||| || Sbjct 1428 CTTCCCTGTGAGGGTTTTTACAAAAATCTGCATCTTG 1464 >seq345138 Length=2957 Score = 95.1 bits (104), Expect = 9e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||| || || ||| |||||| || || ||||| ||||| || | || Sbjct 2324 AGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGCGTGCGG 2383 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||||||| || |||||||||||||| ||||| || || | ||| | ||||||| Sbjct 2384 CCATCCTCCAACTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCC 2443 Query 48669 TTGTC 48673 ||||| Sbjct 2444 TTGTC 2448 >seq651517 Length=23778 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 |||||| | ||| |||||| ||| ||||| || ||||| ||||| | | | || | || Sbjct 16875 CAACACAAGATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTACGCCCATC 16934 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||||||| || || | ||| ||||||| || ||||| | || || ||||| || Sbjct 16935 TTCCAACTGTTTGCCAGAAAAAATCAGTCTTTGCTGATCAGGAGG----CCTTCCTTATC 16990 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 || || ||||||| | | | ||||||| || ||||| | ||||| || Sbjct 16991 CTGGATTTTGGCTTTTACATTTTCTATTGTATCTGACGGTTCAACCTCGAGGGTAATGGT 17050 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || || | ||||||| |||||||||||| || Sbjct 17051 CTTCCCTGTGAGGGTTTTTATGAAAATCTGCATCTTG 17087 >seq335148 Length=7748 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 |||| ||||| ||| || ||| |||||| || || || || ||||| ||| | || | Sbjct 7091 CGCAGCACCAGATGGAGGGTGGACTCTTTCTGGATGTTATAGTCAGAAAGAGTGCGGCCA 7150 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || |||| ||| || |||||||||||||| ||||| || | | || | |||||||||| Sbjct 7151 TCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTTAGGTGGGATGCCCTCCTTG 7210 Query 48672 TC 48673 || Sbjct 7211 TC 7212 >seq808566 Length=7867 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||||| | ||| || ||| || ||||| || ||||| ||||| ||| | | | || Sbjct 1326 CAACAGAAGATGAAGTGTGGATTCCTTTTGGATGTTGTAGTCAGACAGAGTACACCCATC 1267 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||| ||| || || ||||| ||||||| || ||||| | |||| |||| ||| || Sbjct 1266 TTCCAGCTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCCTTCTTCTC 1207 Query 48674 GCTAATCTTTTG-TTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCG 48732 ||| ||| | ||||||| | | | || |||| || ||||| | || || | Sbjct 1206 -CTAGATTTTGGCTTTTACATTTTCTATTGTATCCGACGGTTCAACCTCGAGGGTGATGG 1148 Query 48733 TTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 | || || || | |||||||| |||||||||||| || Sbjct 1147 TCTTCCCTGTGAGGGTTTTTACGAAAATCTGCATCTTG 1110 >seq449207 Length=1366 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||||| | ||| || ||| || ||||| || ||||| ||||| ||| | | | || Sbjct 341 CAACAGAAGATGAAGTGTGGATTCCTTTTGGATGTTGTAGTCAGACAGAGTACACCCATC 282 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||| ||| || || ||||| ||||||| || ||||| | |||| |||| ||| || Sbjct 281 TTCCAGCTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCCTTCTTCTC 222 Query 48674 GCTAATCTTTTG-TTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCG 48732 ||| ||| | ||||||| | | | || |||| || ||||| | || || | Sbjct 221 -CTAGATTTTGGCTTTTACATTTTCTATTGTATCCGACGGTTCAACCTCGAGGGTGATGG 163 Query 48733 TTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 | || || || | |||||||| |||||||||||| || Sbjct 162 TCTTCCCTGTGAGGGTTTTTACGAAAATCTGCATCTTG 125 >seq689114 Length=2761 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/217 (69%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 |||||| | ||| |||||| ||| |||| || |||| ||||| | | | | | || Sbjct 548 CAACACAAGATGAAGCGTGGACTCCTTTTTGATGTTGTGGTCAGACAAAGTATGCCCATC 489 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||||||||| || ||||| ||||||| |||||| | | |||| || ||||| || Sbjct 488 TTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGTTGACCAGGAGGAATTCCTTCCTTATC 429 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 || || ||| ||| | | | || |||| || ||||||| || || || Sbjct 428 CTGGATTTTGGCTTTCACATTTTCTATTTA-TCCGACGGTTCAACCTCCAGTGTGATGGT 370 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || || | ||||||| |||||||||||| || Sbjct 369 CTTCCCTGTGAGGGTTTTTATGAAAATCTGCATCTTG 333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 377033080786938