Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq382080 86.0 9e-12 >seq382080 Length=1803 Score = 86.0 bits (94), Expect = 9e-12 Identities = 155/224 (69%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 18373 ACACGGTATACTCTCTATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATA 18432 ||| || || | || || ||| | || ||| || |||||||||||||||| || || Sbjct 1143 ACAAGGCATGGTTTCAATGGCACTGAAGAAAAATTCCCTTTCTTTGGAATCTTTAATGTA 1202 Query 18433 AGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACT 18492 |||||| || | ||| ||||||||||||| ||||| ||||||| || || || || | Sbjct 1203 AGTGTCAATAAGGAAACTATACATTTCAGAAGGTATGTTTTCCATGGCAATTTGGAAGCC 1262 Query 18493 ATAAAACGATCTAGCCTCGGGATATTGAA--TC-TCGCTATAAAATCTTTCTACCAAATT 18549 ||| || | | || || | | |||| || | ||| ||||| || |||| || Sbjct 1263 ATACAAACAGCGGGCTTCTGTAATGTGAACTTCTTGGCT---AAATCGCTCCACCAGGTT 1319 Query 18550 CTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACAT 18593 ||||| || || || ||| | | | || || |||| ||||| Sbjct 1320 TTCATTTACGATGCCATCACATGCTACAAAGAAAGCCAGAACAT 1363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 724178140709600