Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq712668 86.0 2e-11 seq406404 86.0 2e-11 >seq712668 Length=6957 Score = 86.0 bits (94), Expect = 2e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || |||||||| || || || || | ||||| ||||| || |||||||| | ||| Sbjct 5098 GTCTTGACAGCTGTGTCGATGAGCCCTTCGCGACCCCCCATGGCGTGGAAGAAGAACTCG 5039 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739 ||| || || | | ||||| |||| || || ||||| ||| || || | Sbjct 5038 GTGGGTGTGAGGCCGGCCAGGTAGGAGTTCTCCACAAAGCCACGGCTCTCAGGTCCATAG 4979 Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799 ||| |||| | ||||| ||||| || | || || | || ||||||| ||||| || Sbjct 4978 TCGTCCTTGATGAAGTGAGGCAGAGTTCGGTGCTTGAATCCAAATGGGATCCGCTTGCCT 4919 Query 302800 TCAACGTTCTGCTGTCC 302816 || ||||||||||| || Sbjct 4918 TCCACGTTCTGCTGCCC 4902 >seq406404 Length=1533 Score = 86.0 bits (94), Expect = 2e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 448926 GCAATTAAACATCATCCTGATAAAAATCCAGATAATAAAGCAGAGGCAGAGGAGAAATTC 448985 ||| ||||| |||||||||||||||||||| ||||||| ||| |||||| | |||||| Sbjct 1381 GCACTTAAATGGCATCCTGATAAAAATCCAGAAAATAAAGAAGAAGCAGAGAAAAAATTC 1322 Query 448986 AAAGAGATTTCTCAAGCTTATGAAATTGTAACAAATAAAGAAAAA 449030 ||||| | || | || ||||| | || | ||||| |||||| Sbjct 1321 AAAGAAGTAGCTGAGGCATATGAGGTATTATCGAATAATGAAAAA 1277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1455958192271022