Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq426082 150 1e-31 >seq426082 Length=3547 Score = 150 bits (166), Expect = 1e-31 Identities = 298/437 (68%), Gaps = 8/437 (2%) Strand=Plus/Minus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGT--AGCGTGCCGTGAT 34261 || |||||||| || ||||| ||| ||| ||||| | |||| ||| |||| | | Sbjct 802 GGTGGGTTTTTGAGAATGAATGTGCAGAGTTTATG--ATGTGTGTCAAGCATGCCTCGGT 745 Query 34262 AACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAG 34321 | || || ||||| || | || || | | |||||| | ||| || |||| Sbjct 744 AGCCACAGGCTTTACAAGAGTTACCTATTGTTTGCTTTTTTGGATTGACGTGCAGTTCAG 685 Query 34322 TCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGT 34381 | || || || |||||||| ||||| | ||||| || ||||| ||||| | || || Sbjct 684 TTTCAGGATTTTCACATTCAGGACAGAGAACAAATTTTTTAATGAATCCATCCAACATGT 625 Query 34382 CCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGA 34441 | || | |||| || || || || ||||| || | || || || || ||| | Sbjct 624 CTTGCAGCTTATTCACCTCATGAGATCCATTGACAGTGTAACGGTCATTCTTAACATCAA 565 Query 34442 CCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTC 34501 ||| || || || ||||||||||| || || || || || || || | | || || Sbjct 564 ACTGGGTCTGTGCTCCCAGCTCGCAACCAAAATATTTGGTGGGATACGTTGGAGGCCGAT 505 Query 34502 CAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTC 34561 ||||||||| || | || ||||||||| || || |||||||| || || || || | Sbjct 504 TAAGCGCCTTTGCAACGTCAACCATGTTGACTATAACTGTCTTGATTCCATTTCCTTTGC 445 Query 34562 CTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATT 34619 | || |||||||| |||| || ||||| |||||||| |||||| ||| | || | Sbjct 444 CCTCAACCTTGGCAATCAGA--CGGGGCATCTTGTAGCGATAGAACTGGTCTGAAACGCT 387 Query 34620 GCGGTTAACGTTCACAG 34636 |||||| ||||| |||| Sbjct 386 GCGGTTGACGTTGACAG 370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408610072423958