Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq198121 143 2e-29 seq345138 134 9e-27 seq335148 125 5e-24 seq713515 105 4e-18 seq416377 104 2e-17 seq235349 104 2e-17 seq508291 95.1 8e-15 seq778983 93.3 3e-14 >seq198121 Length=2544 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | |||||| | ||| | || ||| ||||| ||||| ||||| || Sbjct 1382 CCTCCCCTCAAGCGCAGGACTAAGTGCAGAGTTGACTCTTTCTGGATGTTGTAGTCAGAC 1323 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| ||||| |||| |||||||| || || || ||||||| | |||||||| | || Sbjct 1322 AGGGTGCGCCCATCTTCCAGTTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGG 1263 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || |||||| | || | ||| ||| |||||| Sbjct 1262 ATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACC 1203 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||| |||||||| || || |||||||| || ||||||||||| Sbjct 1202 TCAAGGGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 1156 Score = 140 bits (154), Expect = 2e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 909 AGAACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCT 850 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||| ||||||| | |||||||| | || | || |||||||| Sbjct 849 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCT 790 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| ||| |||||| |||| ||| |||||| Sbjct 789 TGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTC 730 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| || ||||||||||| Sbjct 729 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 698 Score = 134 bits (148), Expect = 9e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||| ||||| ||||| ||||| || ||| |||| |||| Sbjct 681 AGAACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 622 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||| ||||||| | |||||||| | || | || |||||||| Sbjct 621 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCT 562 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| ||| |||||| |||| ||| |||||| Sbjct 561 TGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTC 502 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| || ||||||||||| Sbjct 501 TTACCAGTCAGGGTCTTCACGAAGATCTGCAT 470 Score = 129 bits (142), Expect = 4e-25 Identities = 158/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||| ||||| ||||| ||||| || ||| |||| |||| Sbjct 453 AGAACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 394 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||| ||||||| | |||||||| | || | || |||||||| Sbjct 393 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCT 334 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | ||| ||| |||||| || | ||| |||| Sbjct 333 TGGATCTTCGCCTTGAC--ATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGG 276 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || |||||||| || ||||||||||| Sbjct 275 TCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 242 Score = 118 bits (130), Expect = 7e-22 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | ||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 1139 AGTACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 1080 Query 34826 TCC-AGTTGCTTTCCGGCGAAGATCAGTCGT-TGCTGGTCTTGCGGCACCCCCTCCTTGT 34883 ||| || || || ||||| ||||||| | | |||||||| | || | || ||||||| Sbjct 1079 TCCCAGCTGTTTCCCGGCAAAGATCAACCCTCTGCTGGTCGGGAGGGATACCTTCCTTGT 1020 Query 34884 CGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | | || || |||||| | || | ||| ||| ||| || || | ||| |||| Sbjct 1019 CTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTAATGG 960 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || |||||||| || ||||||||||| Sbjct 959 TCTTACCAGTAAGGGTCTTCACGAAGATCTGCAT 926 Score = 114 bits (126), Expect = 8e-21 Identities = 154/213 (72%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||||||||| ||||| || || || ||| |||| |||| Sbjct 225 AGAACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCATCT 166 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||| ||||||| | |||||||| | || | || |||||||| Sbjct 165 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCT 106 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| ||| |||||| || | ||| |||||| Sbjct 105 TGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 46 Query 34946 TTTCCC-GTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || ||||| || || ||||||||||| Sbjct 45 TTCAACAGTCAGGGTTTTCACGAAGATCTGCAT 13 >seq345138 Length=2957 Score = 134 bits (148), Expect = 9e-27 Identities = 160/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | |||| ||| ||||| ||||| ||||| || || |||| |||| Sbjct 2329 CAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCATC 2388 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| || || ||||| || ||||| || |||||||| | || | ||||||||||| Sbjct 2389 CTCCAACTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 2448 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | ||||| ||||| || || || | ||| ||| |||||| || | ||| ||| Sbjct 2449 TTGGATTTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 2506 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||| | |||||||| || ||||||||||| Sbjct 2507 GTCTTGCCCATCAGGGTCTTCACGAAGATCTGCAT 2541 >seq335148 Length=7748 Score = 125 bits (138), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| ||||| || | |||| ||| ||||| ||||||||||| || || |||| |||| Sbjct 7093 CAGCACCAGATGGAGGGTGGACTCTTTCTGGATGTTATAGTCAGAAAGAGTGCGGCCATC 7152 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || ||||| || ||||| || ||||||| | || | ||||||||||| Sbjct 7153 TTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTTAGGTGGGATGCCCTCCTTGTC 7212 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | ||||| ||||| || || || | ||| ||| | ||| | | ||| ||| Sbjct 7213 TTGGATTTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCCTGACCTTGAGGGTGATG 7270 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| |||||||| || ||||||||||| Sbjct 7271 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 7305 >seq713515 Length=817 Score = 105 bits (116), Expect = 4e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | || ||| ||||||||||| ||||| || Sbjct 413 CCACCCCTCAGACGGAGGACCAGGTGCAGAGTAGACTCTTTCTGAATGTTGTAGTCAGAA 472 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| || | ||||| || | || Sbjct 473 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGATCAGGAGGG 532 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || || || || | || || || || || || || | ||| ||| ||| | Sbjct 533 ATGCCTTCTTTATCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCCA 590 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 591 CCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 639 >seq416377 Length=912 Score = 104 bits (114), Expect = 2e-17 Identities = 152/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | |||| ||| |||| ||||| ||||| || | |||| |||| Sbjct 535 CAGCACCAGGTGGAGGGTGGACTCTCTCTGGATGTTGTAGTCAGAGACAGTGCGGCCATC 476 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || || || || ||||| | |||||||| | | | ||||||||||| Sbjct 475 TTCCAGCTGTTTGCCCGCAAATATCAGGTGCTGCTGGTCGGGTGAGATGCCCTCCTTGTC 416 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | |||| ||||| || || || | ||| ||| |||||| || | ||| ||| Sbjct 415 TTGGGTTTTGGCCTTGAC--ATTCTCAATGGTGTCACTGGACTCGACCTCGAGGGTGATG 358 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGC 34975 ||||| || || |||||||| | ||||||||| Sbjct 357 GTCTTGCCTGTCAGGGTCTTCATGAAGATCTGC 325 >seq235349 Length=927 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| ||||| || | |||| ||| |||| ||||| ||||| || | |||| |||| Sbjct 46 CAGCACCAGATGCAGGGTGGACTCTCTCTGGATGTTGTAGTCAGAGACAGTGCGGCCATC 105 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || || || || ||||| | |||||||| | | | ||||||||||| Sbjct 106 TTCCAGCTGTTTGCCCGCAAATATCAGGTGCTGCTGGTCGGGTGAGATGCCCTCCTTGTC 165 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | |||| ||||| || || || | ||| ||| |||||| || | ||| ||| Sbjct 166 TTGGGTTTTGGCCTTGAC--ATTCTCAATGGTGTCACTGGACTCGACCTCGAGGGTGATG 223 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || |||||||| | ||||||||||| Sbjct 224 GTCTTGCCTGTCAGGGTCTTCATGAAGATCTGCAT 258 >seq508291 Length=5041 Score = 95.1 bits (104), Expect = 8e-15 Identities = 152/215 (71%), Gaps = 5/215 (2%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | || ||| ||||| || || |||| || || |||| |||| Sbjct 1486 CAGCACCAAGTGCAGCATGGACTCTTTCTGGAT-TTGTAGTTGGAGAGAGTGCGGCCATC 1544 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || || || || ||||| |||||||||| | || | || |||||||| Sbjct 1545 TTCCAGCTGTTTGCCTGCAAATATCAGATGTTGCTGGTCCCGTGGGATACCTTCCTTGTC 1604 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | ||||| |||||| || || || | ||| ||| ||||| |||| ||| || Sbjct 1605 TTGGATTTTGGTTTTGAC--ATTCTTGATGGTGTCACTGGGTTCGACCTCAAGGGTGGTG 1662 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || | |||||||| | ||||||||||| Sbjct 1663 GTCTTGCCGGGCAGGGTCTTCATGAAGATCTGCAT 1697 >seq778983 Length=1906 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||| | | |||| ||| ||| | || ||| ||||| |||| ||||| || Sbjct 1525 CCTCCCCTCTAGCGCAGGGCCAAGTGTAGAGTTGACTCTTTCTGGTTGTTGTAGTCGGAC 1584 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| || || |||| |||| || || ||||| ||| ||| |||||||| | || Sbjct 1585 AGGGTGTGCCCATCTCCCAGCTGTTTCCCGGCAGAGACTGGTCTCTGCTGGTCAGGGGGG 1644 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTA--TCGATTCATTGGCCTCGA 34928 | || ||||| || | || || |||| | || || | | ||| ||| ||||| Sbjct 1645 ATGCCTTCCTTATCTTGGATCTTCGCTTTGGC--ATTCTCAGTGGTGTCACTGGGCTCGA 1702 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 | |||| ||| |||||||| || | ||||||| | ||||||||||| || Sbjct 1703 CCTCAAGGGTGATGGTCTTGCCAGCCGGGGTCTTCATGAAGATCTGCATTAT 1754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322354526762714