Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq506967 100 4e-16 seq611773 96.9 5e-15 seq394655 96.9 5e-15 seq270171 96.9 5e-15 seq88486 96.9 5e-15 seq697174 95.1 2e-14 seq839444 91.5 2e-13 seq787795 89.7 8e-13 seq742764 89.7 8e-13 seq667311 87.8 3e-12 seq651517 87.8 3e-12 seq629906 86.0 1e-11 seq377023 86.0 1e-11 seq158964 86.0 1e-11 seq449898 84.2 3e-11 seq20625 84.2 3e-11 >seq506967 Length=1334 Score = 100 bits (110), Expect = 4e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||||||||||| | ||||| || || || || |||| || |||| | Sbjct 883 TGCAGATTTTCATAAAAACCCTCACAGGGAAGACCATCACCCTTGAAGTTGAACCGTCAG 824 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||||||| ||||| ||| ||| ||||| ||||| || ||||| | Sbjct 823 ATACAATAGAAAATGTAAAAGCCAAAATCCAAGATAAGGAAGGAATTCCTCCTGATCAGC 764 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 ||||||| ||| |||| || || || || || ||| Sbjct 763 AAAGACTGATTGTTGCTGGCAACCAGTTGGAAGAT 729 >seq611773 Length=2016 Score = 96.9 bits (106), Expect = 5e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||||||||||| | ||||| || || || || |||| || |||| | Sbjct 1686 TGCAGATTTTCATAAAAACCCTCACAGGGAAGACCATCACCCTTGAGGTTGAACCGTAAA 1627 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||||||| ||||| | ||| ||||| ||||| || ||||| | Sbjct 1626 ATACAATAGAAAATGTAAAAGCCAAAATCAAGGATAAGGAAGGAATTCCTCCTGATCAGC 1567 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| |||||||| | || || || || ||| | || || | ||||| || | Sbjct 1566 AAAGACTGATTTTTGCTGCCAAGCAGTTGGAAGATGGGCGTACTTTGTCTGATTACAACA 1507 Query 146212 TACAAAAAGAATCGAC 146227 | ||||| || || || Sbjct 1506 TCCAAAAGGAGTCCAC 1491 >seq394655 Length=1474 Score = 96.9 bits (106), Expect = 5e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || |||||||||| | ||||| || || | || | || || ||||| | Sbjct 1264 TGCAGATTTTCATAAAAATCCTCACAGGGAAGACCGTCACCCTCGAGGTTGAACAATCAG 1323 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||||||| ||||| || ||| ||||| ||||| || ||||| | Sbjct 1324 ATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAGC 1383 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| |||||||| || ||||| || || ||| | || || | || || || | Sbjct 1384 AAAGACTGATTTTTGCTGGCAAACAGTTGGAAGATGGGCGTACTTTGTCTGACTACAACA 1443 Query 146212 TACAAAAAGAATC 146224 | ||||| || || Sbjct 1444 TCCAAAAGGAGTC 1456 >seq270171 Length=3188 Score = 96.9 bits (106), Expect = 5e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| ||||||| | ||||| || || || || | || || |||| | Sbjct 2320 TGCAGATTTTCGTAAAAACCCTCACAGGGAAGACCATCACCCTCGAGGTTGAACCGTCGG 2379 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||||||| ||||| || ||| ||||| ||||| || ||||| | Sbjct 2380 ATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAGC 2439 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| |||||||| || ||||| || || ||| | || || | || || || | Sbjct 2440 AAAGACTGATTTTTGCTGGCAAACAGTTGGAAGATGGGCGTACTTTGTCTGACTACAACA 2499 Query 146212 TACAAAAAGAATCGAC 146227 | ||||| || || || Sbjct 2500 TCCAAAAGGAGTCCAC 2515 >seq88486 Length=1856 Score = 96.9 bits (106), Expect = 5e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||||| ||||| | |||||||| || || || | || || |||| | Sbjct 807 TGCAGATTTTCATCAAAACCCTTACAGGAAAGACCATCACCCTCGAGGTTGAACTGTCAG 748 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||||||| ||||| || ||| ||||| ||||| || ||||| | Sbjct 747 ATACCATAAAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAGC 688 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||||| || || || || || ||| || || || | || || || | Sbjct 687 AAAGACTGGTTTTTGCTGGCAAGCAGTTGGAAGATGGGAGTACCTTGTCTGACTACAACA 628 Query 146212 TACAAAAAGAATCGAC 146227 | ||||| || || || Sbjct 627 TCCAAAAGGAGTCCAC 612 >seq697174 Length=16667 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 |||| || |||||||||| | ||||| || || | || | || || |||| || | Sbjct 11465 TGCAGATTTTCATAAAAATCCTCACAGGGAAGACCGTCACCCTCGAGGTTGAACGATCA- 11407 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| || ||||||||||| ||||| || ||| ||||| ||||| || ||||| Sbjct 11406 GATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 11347 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 |||||||| |||||||| || ||||| || || ||| | || || | || || || Sbjct 11346 CAAAGACTGATTTTTGCTGGCAAACAGTTGGAAGATGGGCGTACTTTGTCTGACTACAAC 11287 Query 146211 ATACAAAAAGAATC 146224 || ||||| || || Sbjct 11286 ATCCAAAAGGAGTC 11273 >seq839444 Length=5194 Score = 91.5 bits (100), Expect = 2e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| ||||||| | ||||| || || || || | || || |||| | Sbjct 2928 TGCAAATTTTCGTAAAAACCCTCACAGGGAAGACCATCACCCTCGAGGTTGAACCGTCGG 2987 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||||||| ||||| || ||| ||||| ||||| || |||| | Sbjct 2988 ATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCGGC 3047 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||||| |||||||| || ||||| || || ||| | | || | || || || | Sbjct 3048 GAAGACTGATTTTTGCTGGCAAACAGTTGGAAGATGGGCGTTCTTTGTCTGACTACAACA 3107 Query 146212 TACAAAAAGAATC 146224 | ||||| ||||| Sbjct 3108 TCCAAAAGGAATC 3120 >seq787795 Length=3177 Score = 89.7 bits (98), Expect = 8e-13 Identities = 115/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 |||| || |||||||||| | ||||| || | || || |||| || |||| || | Sbjct 653 TGCAGATTTTCATAAAAATCCTTACAGGGAAGATCATCACACTTGAGGTTGAACCATCA- 595 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| || ||||||||||| ||||| || ||| ||||| ||||| | |||||| Sbjct 594 GATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCTGGATCAA 535 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 ||||||| |||||||| || || || || || ||| Sbjct 534 TAAAGACTGATTTTTGCTGGCAAGCAGTTGGAAGAT 499 >seq742764 Length=2195 Score = 89.7 bits (98), Expect = 8e-13 Identities = 114/156 (73%), Gaps = 1/156 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACA-TAAC 146090 |||| || || ||||||| | ||||| || || | || | || || |||| | Sbjct 1398 TGCAGATTTTTGTAAAAACCCTTACAGGGAAGACCCTCACCCTAGAGGTTGAACCCTTTG 1457 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| || ||||||||||| ||||| || ||| ||||| ||||| |||||||| Sbjct 1458 GATACAATAGAAAATGTAAAAGCCAAAATCCAGGGTAAGGAAGGAATTCCTCCCGATCAG 1517 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 |||||||| |||||||| || ||||| || || ||| Sbjct 1518 CAAAGACTGATTTTTGCTGGCAAACAGTTGGAAGAT 1553 >seq667311 Length=5630 Score = 87.8 bits (96), Expect = 3e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| ||||||| | ||||| || || || || | || || |||| | Sbjct 4372 TGCAGATTTTCGTAAAAACCCTCACAGGGAAGACCATCACCCTCGAGGTTGAACCGTCGG 4313 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||||||| ||||| || ||| |||| ||||| | ||||| | Sbjct 4312 ATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGAAATTCCTTCTGATCAGC 4253 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| |||||||| || ||||| || || ||| | || || | || || || | Sbjct 4252 AAAGACTGATTTTTGCTGGCAAACAGTTGGAAGATGGGCGTACTTTGTCTGACTACAACA 4193 Query 146212 TACAAAAAGAATCGAC 146227 | ||||| || || || Sbjct 4192 TCCAAAAGGAGTCCAC 4177 >seq651517 Length=23778 Score = 87.8 bits (96), Expect = 3e-12 Identities = 137/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||||||||||| | ||||| || || ||||| | || || |||| | Sbjct 17082 TGCAGATTTTCATAAAAACCCTCACAGGGAAGACCATTACCCTCGAGGTTGAACCGTCAG 17023 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||||||| ||||| || ||| ||||| || || ||||| | Sbjct 17022 ATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGG----CCTCCTGATCAGC 16967 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| |||||| | || ||||| || || ||| | || || | || || || | Sbjct 16966 AAAGACTGATTTTTTCTGGCAAACAGTTGGAAGATGGGCGTACTTTGTCTGACTACAACA 16907 Query 146212 TACAAAAAGAATCGAC 146227 | ||||| || || || Sbjct 16906 TCCAAAAGGAGTCCAC 16891 >seq629906 Length=10887 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| ||||||| | ||||| || | || || | || || |||| | Sbjct 9532 TGCAGATTTTCGTAAAAACCCTCACAGGGAAGGCCATCACCCTCGAGGTTGAACCGTCGG 9591 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||||||| ||||| || ||| ||||| ||||| || ||||| | Sbjct 9592 ATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAGC 9651 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 ||||||| |||||||| || || || || || ||| Sbjct 9652 AAAGACTGATTTTTGCTGGCAAGCAGTTGGAAGAT 9686 >seq377023 Length=3771 Score = 86.0 bits (94), Expect = 1e-11 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || ||||||| | ||||| || || || || | | || |||| || || Sbjct 1886 TGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACCCTCGGGGTTGAAC-TATCG 1828 Query 146092 -ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 |||| || ||||||||||| ||||| || ||| ||||| |||| || ||||| Sbjct 1827 GATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCTTCCTGATCAG 1768 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 |||||||| |||||||| || ||||| || || ||| Sbjct 1767 CAAAGACTGATTTTTGCTGGCAAACAGTTGGAAGAT 1732 >seq158964 Length=5733 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || ||||||| | ||||| || || || || | || || |||| | Sbjct 4940 TGCAGATTTTAGTAAAAACCCTCACAGGGAAGACCATCACCCTCGAGGTTGAACCATCGG 4881 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||||||| ||||| || ||| ||||| ||||| || ||||| | Sbjct 4880 ATACAATAGAAAATGTAAAAGCCAAAATTCAGGATAAGGAAGGAATTCCTCCTGATCAGC 4821 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 ||||||| |||||||| || || || || || ||| Sbjct 4820 AAAGACTGATTTTTGCTGGCAAGCAGTTGGAAGAT 4786 >seq449898 Length=3288 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || ||||||| | ||||| || || || || | || || |||| | Sbjct 1459 TGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACCCTCGAGGTTGAACCGCCGG 1400 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||||||| ||||| || ||| ||| | ||||| || ||||| | Sbjct 1399 ATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAAGAATTCCTCCTGATCAGC 1340 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| |||||| | || ||||| || || ||| | || || | || || || | Sbjct 1339 AAAGACTGATTTTTTCTGGCAAACAGTTGGAAGATGGGCGTACTTTGTCTGACTACAACA 1280 Query 146212 TACAAAAAGAATCGAC 146227 | ||||| || || || Sbjct 1279 TTCAAAAGGAGTCCAC 1264 >seq20625 Length=2084 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 146036 AATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATAC 146095 ||| ||||||||| | | ||||| || || || || |||| | |||| ||||| Sbjct 991 AATTTTCATAAAAGCCCTTACAGGGAAGACCATCACCCTTGAGATTGAACCATTGGATAC 932 Query 146096 TATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAG 146155 || ||||||||||| ||||| || ||| ||||| |||| || ||||| ||||| Sbjct 931 CATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCTTCCTGATCAGCAAAG 872 Query 146156 ACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 ||| |||||||| || || || || || ||| Sbjct 871 ACTGATTTTTGCTGGCAAGCAGTTGGAAGAT 841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777901766757520