Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq572090 105 1e-17 >seq572090 Length=2006 Score = 105 bits (116), Expect = 1e-17 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 |||||| ||| | |||||||||| | |||| ||||| | || || || || ||||| Sbjct 1719 GATAGCTGCAGCGCTGTGGTGGTACTTTGTATCGAAAGGTGTTGAGTATTTGGACACAGT 1660 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 |||||| || || ||||| || || || ||| || || |||||||| ||||| | Sbjct 1659 GTTTTTTATCCTAAGGAAGAAAAACAACCAAGTTTCTTTCCTTCACGTATACCATCACTG 1600 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 ||| |||||||| || | ||| |||| ||||||||| | ||||| || || Sbjct 1599 TACCATGTTTACATTGTGGTGGATAGGAATTAAATGGGTCGCAGGGGGACA 1549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 893914022004160