Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20belangeri_20[genbank_20GCA_5F000181375.1_202006-06-08] 841,006 sequences; 2,137,225,476 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq727490 109 8e-19 >seq727490 Length=5811 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 213996 AGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTT 214055 |||| || ||||| || | ||||| || || ||||| || ||| || | ||| | | Sbjct 4833 AGATCATCGACGGAGAGCTGTACCCACCCACAGTCAAAGATACCCAGGTAGAGATGATCT 4774 Query 214056 ACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCG 214115 || || ||| ||||| | | || || || |||| | ||| | || || || | Sbjct 4773 ACCCGCCTCACGTCCCCGAGCACCTGCGGTTTGCTGTGGGACAGGAGGTCTTCGGTCTGG 4714 Query 214116 TGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACG 214175 |||||||| | ||| |||| |||| ||||||||| | || || ||| |||| ||||||| Sbjct 4713 TGCCCGGTCTGATGATGTATGCCACCATCTGGCTGCGGGAACATAACCGGGTGTGCGACG 4654 Query 214176 TGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 |||| || || || ||||| || ||| |||| || | ||||||||| Sbjct 4653 TGCTTAAGCAGGAACACCCAGAGTGGGACGATGAGCGTTTGTTCCAGA 4606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715736625589440