Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq53 699 0.0 seq48864 288 1e-72 seq79 131 2e-25 seq75 129 7e-25 seq199 116 4e-21 seq805 105 8e-18 seq44217 87.8 2e-12 >seq53 Length=2810707 Score = 699 bits (774), Expect = 0.0 Identities = 1434/2123 (68%), Gaps = 29/2123 (1%) Strand=Plus/Minus Query 52828 TGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAA 52887 ||| ||| | || | || ||| ||||| || || || | | | |||| || || || Sbjct 1303543 TGCTGGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAATTCTGCTTCCAGCCATAGAA 1303484 Query 52888 ATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 52947 |||||||| || |||||| ||| | || || || ||||||||||||| ||| ||||| Sbjct 1303483 GTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATATTCAAAGACTGACT 1303424 Query 52948 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTC 53007 |||||| ||||| | | || | || ||||| || | | || || || | ||||| Sbjct 1303423 TTGATCAATGAAAGTATCTCTCTTGGCTGCCATCTTGAGAACAGTTTTCTGGGAGATTTC 1303364 Query 53008 CCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG-TAT--TCTGAATAGA 53064 ||| ||||| ||||||| | ||| | || || | || | || ||| |||| ||||| Sbjct 1303363 CCACATAGTCTTATAAAGTTCCTTCAGGTCATCAGTAATTTCTGGTATGCTCTGGATAGA 1303304 Query 53065 TCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 53124 ||| | | |||||| ||| || ||||| |||||||| || | ||| || | Sbjct 1303303 GCCATTGCATGCAATAATCTGATTTTTCATCTCTTCATTCCACAAGCCCCACTCAGTAAG 1303244 Query 53125 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 53184 | || | || | || ||||| || | ||||||||||| ||||| ||||| ||||||| Sbjct 1303243 ATCTTTCAGTAAGTGAGGATTTACAATCTGAAATTCTCCTGACAAGACTCTGTGAGTGTA 1303184 Query 53185 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 53244 || || |||||||| ||||| | ||||||||||| ||||| || |||||||||| || Sbjct 1303183 GATGTTGCTGGTATAAGGTTCAATGGACTCATTATTCCCCAAGATCTGAGCAGTTGCAGC 1303124 Query 53245 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 53304 ||| | ||| || || | | |||||| ||||| | ||| || || || || || || Sbjct 1303123 AGTAGTCATTGGGGCAATAAGTAAACTGTTTCTTACACCATACTTTGCAATCTTGTCCTT 1303064 Query 53305 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 53364 ||| ||| ||| | ||| || || | || ||| || ||||| Sbjct 1303063 GAGAAGTTTCCAGTCCCACAGGTCTGTGGGAGTAACATTCCACACATCATACTGAAGAAT 1303004 Query 53365 ACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 53424 | || || | || || |||| || || ||||| || | || | || || || Sbjct 1303003 TTCTTTGCTTACTGGAGAGCCCTCATAGGTTTCCTATGGACCATACTCTTTGGCCAGGTC 1302944 Query 53425 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG 53484 ||| || || || || || || |||||||| |||| ||||| | |||||| || || Sbjct 1302943 ACAGCTGGCTTCCAAGGCTCCATAATAAATAGTTTGAAAGATTTGCTTATTCAGTAACTG 1302884 Query 53485 TGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 53544 | || | || ||||||||||| | | | ||||| || || || | ||||||| Sbjct 1302883 GACCTCTGGACTTTCAAATGGATATCTCATCAAGATAAAAGCATCAGCCAGAACTTGAAC 1302824 Query 53545 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 53604 ||||| || || || ||| | ||||| || | | || ||||||||||| || || Sbjct 1302823 CCCAATTCCAATGGGGTGATGGCGTTTATTTGATACGTATGCCTCTGGAATAGGGTAGTA 1302764 Query 53605 ATTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTT---TGACCACATCCTTCAG 53661 || ||| ||||||||||| | ||||| ||||| |||| |||| || || || Sbjct 1302763 GTTTCTATTAATAATTTTATTCAAGTTTCGAACAATGACTTCAGTGACTTCAGCC---AG 1302707 Query 53662 TTTGAGAAAATCAAAT---TGTCCATCTATTACAAACATGTTCAATGCAATAGATGCCAG 53718 || ||| || | ||| | | | ||| |||| |||| || | || |||| Sbjct 1302706 CTTCTTAAAGTCGTACGTGTGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCCAA 1302647 Query 53719 ATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTA 53776 |||||||| || ||||| | | || | ||| | || ||| || ||||| || || Sbjct 1302646 GTTACAAACTGCAACCTCCTCTTTGCTG--GTATACTCTACTATTTCTGTGCACAGGTTG 1302589 Query 53777 CTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAA 53836 || || ||||| | ||| | || || || || ||||| | ||||| | || || || Sbjct 1302588 CTGCATTTGATTGCTCCCAGGTTCTGCTGGTTGCTCTTATGATTACAGGAATTTTTGTAG 1302529 Query 53837 AGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGA 53896 || ||| | || || |||| || |||| || || ||||| || | ||| | || Sbjct 1302528 AGCATGTAGGG-GTGTCAGTCTCTGTCTGAGACTCAATAATAGCATACCAAAGCTGCTGA 1302470 Query 53897 GCCTTTA-----TTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTT 53951 || || | || | || || || || ||| | | | | | ||| || | Sbjct 1302469 GCTTTCACAACTTTGTGAATGTGACCCTGCTT-CTCATACTTTTCAT--ATAGCTTC--T 1302415 Query 53952 CAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACC 54011 |||| || ||||||||||| | |||| |||||||| |||| ||||||||||| |||| Sbjct 1302414 CAAATTCTTCTCCCCAAACTTCATCCAGGCCAGGACACTCATTTGGACACATCAAAGACC 1302355 Query 54012 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 54071 | || | | | ||| | |||||| |||||||| | ||||||||| || | || | Sbjct 1302354 AGTCCTGATTAGTTTCCACCCATTTCATGAAGAGATCTGAAATCCAAAGGGCAAAGAAAA 1302295 Query 54072 GATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 54131 |||| || | ||||| || |||||||| ||||| || | |||||| ||| | | | Sbjct 1302294 GATCCCTCGCATGCTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGAAACTCAAAGA 1302235 Query 54132 TATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCT 54191 | || ||||| | |||| || ||| || | | | ||| | || |||||||| || | Sbjct 1302234 TGTCTAAATGCTAAGGTTTCAGGTAAATAGCAAATGCCCCAAGACGCTTGTTTCCACCTT 1302175 Query 54192 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 54251 |||||| ||||| ||| || ||| | || ||||||| |||||| | || |||||||| Sbjct 1302174 GATCTACGTATCGAGCTGTATTACTGTATACTCTCAGCATTGGTACAAGGCCATTGGAAT 1302115 Query 54252 CACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTA 54311 ||||| ||||| | | ||||| ||| | || |||||| ||| | | | ||| | Sbjct 1302114 TGCCATTAGTCCCAGCAAGGTAGCTGCCAGTAGCCCGAATACAACTCACAGCAACACCAA 1302055 Query 54312 TCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 54371 | ||||| || ||||| || || || || | |||| |||||||| || || || | Sbjct 1302054 TTCCCCCAGCAGACTTAGAAATCAAAGCACACTGCTTTAGAGTATCATAAATCCCTTCAA 1301995 Query 54372 TACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 54431 | || ||||| ||||||| || || ||| || |||| | || | ||| | || || | Sbjct 1301994 TGCTGTCATCTTTCATGTTCAGAAGGAAATAGGTAGAAAGTTCTGGGCGATTGGTGCCAG 1301935 Query 54432 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCT 54491 |||| || | || ||||| || || || ||||| || |||||||| || || || || | Sbjct 1301934 CATTGAAGAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGAAAGAAGGTTATATGTTT 1301875 Query 54492 CGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCT 54551 | || || | || || || || ||||| || || | || | ||| |||||||| | Sbjct 1301874 CAATTGCAGCATCAATGTCTTCTTTGTGAATCCCCACAGATACCCTCATCAACATGTGTT 1301815 Query 54552 GAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAA 54611 | ||||| ||| | | || | || |||| ||| ||||| | ||||| | |||| Sbjct 1301814 GCGGTCTGTCAGCCACTTTCCCACTAATCTTCAACAAATAGGACTGCTCCAATGCCTTAA 1301755 Query 54612 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCT 54671 | |||||||| ||||| ||||| ||||| || || || || | || || || ||| | Sbjct 1301754 AGCCAAAATAATTGTAAGAAAAATCTCGATCATAGATGATGGCAGAATTTAGGCAATCTT 1301695 Query 54672 TATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTT 54730 ||| ||| | |||| || |||| | | || | ||| ||||| ||||| Sbjct 1301694 TATTGGCCAAAACAATGTCCAGTGT-TGACTTGGCCACCATGGAAGAGTGTTTGCCATTA 1301636 Query 54731 TTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCT 54790 | ||||| | ||||| | | || | |||||| |||||||| | ||| ||||||||| Sbjct 1301635 TGTGGATTTATGTAGTTGTAAAGGTCTTCCATCACATCACTAAACATTTTCTTTGTTTCT 1301576 Query 54791 TTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTA 54850 ||||| | || ||||| || || || || || ||||||||||| || || || | ||| Sbjct 1301575 TTGTGCAAGTTAGATACAGCAATCCTTGCTGCCAGAATGGCATAGTCAGGGTGCTTAGTA 1301516 Query 54851 GTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 54910 || | || || ||| |||| || | || ||| || | ||| ||| | || || ||| || Sbjct 1301515 GTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGTTCAACCATGGTGACCCCACTA 1301456 Query 54911 TATATTCCTTGGATAACCTTCAT 54933 || | |||||||| || ||||| Sbjct 1301455 TACAAGCCTTGGATTACTTTCAT 1301433 >seq48864 Length=438413 Score = 288 bits (318), Expect = 1e-72 Identities = 549/802 (68%), Gaps = 15/802 (2%) Strand=Plus/Plus Query 23791 AAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTTTT 23847 |||||||| ||||||| | |||| ||| || | || |||||||||||||| | | Sbjct 419683 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 419742 Query 23848 GGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCA 23907 | || ||||| || | || || || || ||||| || ||||| | | | ||||| |||| Sbjct 419743 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 419802 Query 23908 TGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCAATC 23967 | || || ||||||| || | | | ||||||||| ||| || | || Sbjct 419803 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 419862 Query 23968 TATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 24027 ||| || |||||||| || || ||||||| | || ||||| | || || || | Sbjct 419863 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 419921 Query 24028 CTGGAAGAGCCACAGTAAGAAATTCTTGTTCAA-TAGAGACCGCGTCTGTTATAAT-AGA 24085 | || | |||| | || || || || ||||| | | ||| || | | ||||| | Sbjct 419922 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCAT---TGATAATGATT 419978 Query 24086 TCTTACTGTTTCTTCACT--CGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 24143 |||| | | ||| | || ||| | | | |||| ||||||| | || | | Sbjct 419979 TCTTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACA 420038 Query 24144 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 24203 | ||||||| || ||| ||||| ||||| | ||| |||||||| ||||| || ||||| Sbjct 420039 TTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATC 420098 Query 24204 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 24263 || | || | || ||||| ||||| | ||||| || |||| |||||| ||||||||| Sbjct 420099 AGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGCCAGTAAAGAAGATTCCTTCT 420158 Query 24264 ACTGCCGCAAAGGCAATAAGTCTTTCTCCATAA----CCGGCGCTGTCATGTATCCACTT 24319 ||||| ||||| || | | | ||||||||| || | |||| ||||| Sbjct 420159 ACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTTGTCCCCAATCCAACG 420218 Query 24320 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 24379 |||||||| |||| ||| || ||||||||||| || || || ||| | |||||| | Sbjct 420219 CAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAA 420278 Query 24380 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 24439 | |||| || |||||||| || || ||||| | | |||||||||||| ||| | Sbjct 420279 TTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGG 420338 Query 24440 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 24499 |||||||| ||||| ||||| || || || ||||| | || || ||||| | ||||| Sbjct 420339 TATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTC 420398 Query 24500 TATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 24559 | | |||||| || | | |||||||| || || || |||| ||| |||| || || Sbjct 420399 TTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGC 420458 Query 24560 CAATACATGTTTTATAAAATAT 24581 || ||||| ||| |||||| Sbjct 420459 CAGAACATGGGATATGAAATAT 420480 Score = 284 bits (314), Expect = 1e-71 Identities = 548/802 (68%), Gaps = 15/802 (2%) Strand=Plus/Plus Query 23791 AAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTTTT 23847 |||||||| ||||||| | |||| ||| || | || |||||||||||||| | | Sbjct 414760 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 414819 Query 23848 GGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCA 23907 | || ||||| || | || || || || ||||| || ||||| | | | ||||| |||| Sbjct 414820 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 414879 Query 23908 TGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCAATC 23967 | || || ||||||| || | | | ||||||||| ||| || | || Sbjct 414880 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 414939 Query 23968 TATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 24027 ||| || |||||||| || || ||||||| | || ||||| | || || || | Sbjct 414940 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 414998 Query 24028 CTGGAAGAGCCACAGTAAGAAATTCTTGTTCAA-TAGAGACCGCGTCTGTTATAAT-AGA 24085 | || | |||| | || || || || ||||| | | ||| || | | ||||| | Sbjct 414999 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCAT---TGATAATGATT 415055 Query 24086 TCTTACTGTTTCTTCACT--CGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 24143 |||| | | ||| | || ||| | | | |||| ||||||| | || | | Sbjct 415056 TCTTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACA 415115 Query 24144 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 24203 | ||||||| || ||| ||||| ||||| | ||| |||||||| ||||| || ||||| Sbjct 415116 TTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATC 415175 Query 24204 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 24263 || | || | || ||||| ||||| | ||||| || ||| |||||| ||||||||| Sbjct 415176 AGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGACAGTAAAGAAGATTCCTTCT 415235 Query 24264 ACTGCCGCAAAGGCAATAAGTCTTTCTCCATAA----CCGGCGCTGTCATGTATCCACTT 24319 ||||| ||||| || | | | ||||||||| || | |||| ||||| Sbjct 415236 ACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTTGTCCCCAATCCAACG 415295 Query 24320 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 24379 |||||||| |||| ||| || ||||||||||| || || || ||| | |||||| | Sbjct 415296 CAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAA 415355 Query 24380 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 24439 | |||| || |||||||| || || ||||| | | |||||||||||| ||| | Sbjct 415356 TTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGG 415415 Query 24440 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 24499 |||||||| ||||| ||||| || || || ||||| | || || ||||| | ||||| Sbjct 415416 TATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTC 415475 Query 24500 TATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 24559 | | |||||| || | | |||||||| || || || |||| ||| |||| || || Sbjct 415476 TTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGC 415535 Query 24560 CAATACATGTTTTATAAAATAT 24581 || ||||| ||| |||||| Sbjct 415536 CAGAACATGGGATATGAAATAT 415557 >seq79 Length=8883450 Score = 131 bits (144), Expect = 2e-25 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 707237 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 707296 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 ||||||||||| ||||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 707297 GACTCATTATTCCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 707356 Query 53270 CTATTTCTAAGACCGTA 53286 || ||||| | ||| || Sbjct 707357 CTGTTTCTTACACCATA 707373 Score = 105 bits (116), Expect = 8e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| || || || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 703085 TCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATGT 703144 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 ||| ||| ||||||||||| ||||| || || || || || ||||| || | | || | Sbjct 703145 TCAAAGACTGACTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTTT 703204 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 | || | |||||||| | ||| ||||||| | |||| | || || |||| Sbjct 703205 TCTGGGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 703255 Score = 105 bits (116), Expect = 8e-18 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 ||||||| | ||| |||||||||||||| | || ||||| || || || || || |||| Sbjct 753043 CACTAAACACTTTCTTTGTTTCTTTGTGCAAGTTAGATACAGCAATCCTTGCTGCCAGAA 753102 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 ||||||| || || || | ||||| | || || ||| |||| || | || ||| || | Sbjct 753103 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 753162 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 ||| ||| | || || ||| |||| | |||||||| || ||||| Sbjct 753163 GTTCAACCATGGTGACCCCACTATACAAGCCTTGGATTACTTTCAT 753208 Score = 104 bits (114), Expect = 3e-17 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 54028 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 54087 |||||||||||| |||||||| ||||||||||| || | || ||||| |||| | || Sbjct 735386 CACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCCCTGGCACGCTG 735445 Query 54088 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 54147 || || |||||||| ||||| || | |||||| ||| | | || || ||||||| || Sbjct 735446 CTCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGAAACTCAAAGATGTCTAAATGCCAAGG 735505 Query 54148 TTCCAAGTATAT 54159 ||||| ||| || Sbjct 735506 TTCCAGGTAAAT 735517 >seq75 Length=11204613 Score = 129 bits (142), Expect = 7e-25 Identities = 110/136 (81%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216 |||| ||||| ||||| | ||| || ||||| ||||| |||||||| || || || || | Sbjct 8448220 CCTCATCTCTGCTAATCAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCT 8448279 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 | ||||| ||||| || ||||| || ||||||||||| |||||||||||||| ||||||| Sbjct 8448280 TGAGCCAGAATATTGATGCAAACGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGG 8448339 Query 24277 CAATAAGTCTTTCTCC 24292 | | || | |||||| Sbjct 8448340 CTACAACACGTTCTCC 8448355 Score = 100 bits (110), Expect = 3e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 |||||||| || || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 8452278 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 8452337 Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514 ||||| || || |||||||| | || || || ||||| |||||| | |||||| || Sbjct 8452338 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTTATCTGAACTTCTTGGCTAAATCGCTC 8452397 >seq199 Length=4383281 Score = 116 bits (128), Expect = 4e-21 Identities = 105/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216 |||| ||||| || || | ||| |||||||| || ||||| ||||| || || | ||| | Sbjct 4204743 CCTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCT 4204684 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 | ||||| ||||| | ||||| ||||| || ||||||||||||||||| || ||||||| Sbjct 4204683 TCAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 4204624 Query 24277 CAATAAGTCTTT 24288 | | || ||||| Sbjct 4204623 CCACAACTCTTT 4204612 Score = 89.7 bits (98), Expect = 6e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 24519 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 24578 ||||||||||| || ||||| ||||||||||||||||| || || | || |||||| Sbjct 4196938 AAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGATGTGAGAGATAAAA 4196879 Query 24579 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 24627 || ||||| ||||| |||| |||||||| | | || ||| || |||| Sbjct 4196878 TACTTTTCATCTGGCTTTAGCTTATTCCAGTGAGGGAGATCCTTTGATA 4196830 >seq805 Length=2268304 Score = 105 bits (116), Expect = 8e-18 Identities = 456/709 (64%), Gaps = 34/709 (5%) Strand=Plus/Minus Query 53417 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 53476 || || ||||| || || || | || || |||||| ||||||| ||||| | |||||| Sbjct 1613342 GCCAGGTCACAGCTGGCTTCCAGAGCTCCATAATAAGTGGTTTCAAAGATTTGCTTATTC 1613283 Query 53477 AGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 53536 || | || || | || ||||| |||| | | | ||||| || || || | Sbjct 1613282 AGTAACAGGGCCTCTGGACTCTCAAAATGATATCTCATCAAGATAAAAGCATCGGCCAG- 1613224 Query 53537 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 53596 |||||| || || || | || ||||| || | || ||||||||| Sbjct 1613223 --------ACCAATTCCAATGGGGCGATAATGTTTATTTGATAAGCATGCCTCTGGAATA 1613172 Query 53597 GGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCC 53656 || || || | | ||| | ||||||||| | ||||| |||||| ||||| || | Sbjct 1613171 GGGTAGTAGCTTACATCAACAATTTTATTCAAGTTTCGGACAATGACTTTAGTGACTTGG 1613112 Query 53657 TTCAGTTTGAGAAAATCAAAT-TGTCCATCTATT---ACAAACATGTTCAATGCAATAGA 53712 |||||| ||| ||| || ||| | ||| | ||| ||| |||| || || || Sbjct 1613111 GCCAGTTTCTTAAAGTCATATGTGTGC-TCTGATGTGACATACACATTCAGGGCCATGGA 1613053 Query 53713 TGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAG 53772 ||||| |||||||| || | || | || | ||| | || ||| || ||||| || Sbjct 1613052 AGCCAGGTTACAAACTGCAAGTTCTCT-GCTG--GTATACTCTACTATTTCTGTGCACAG 1612996 Query 53773 ATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTT------TTTG-TTACACG 53825 || ||||| | ||| |||| | || || || || ||||| |||| |||| | Sbjct 1612995 GTTGCTACATTCGATCATTCCCAGGTTCTGCTGGTTGCTCTTCCTTTTTTTGATTACT-G 1612937 Query 53826 CATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCC 53885 ||| || || | | | || |||||| | ||| |||| || || | ||| || | || Sbjct 1612936 AATCTTTGAGGAGCAAGTAGGGGGTACCAATCTCAGTCTGAGACTCAACAATAGCATACC 1612877 Query 53886 AGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCT--TTCGTATAGTGTATA 53943 | | |||| | | |||| | | | | || ||| ||| | | Sbjct 1612876 AAAGCTGCTGAGCTTCCCCAAC---TTTGCAAA-CATGACCCTGCTTCTCATACTTCTCA 1612821 Query 53944 CA-ATCGTTCAAACTCGTCTCCCCAAACAT--TGTCCAATCCAGGACATTCATCCGGACA 54000 | | | ||||| || |||| |||||| || ||| ||||||| |||| ||||| Sbjct 1612820 TATAGCTCTCAAATTCTTCTCTCCAAACTGGATGACCAGGTCAGGACACTCATTTGGACA 1612761 Query 54001 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 54060 |||||| ||||| || | | | |||||||||||| |||||||| ||||||||||| Sbjct 1612760 CATCAAAGACCAGTCCTGATTAGTTTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAG 1612701 Query 54061 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 54109 | | | | ||||| |||| | || || || |||||||| ||| || Sbjct 1612700 ACCAAAGGAAAGATCCCTGGCACGCTGCTCTTCCTTTCCTGTGTTCCTT 1612652 Score = 84.2 bits (92), Expect = 3e-11 Identities = 238/360 (66%), Gaps = 13/360 (4%) Strand=Plus/Minus Query 54200 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTG 54259 |||| ||| || | ||| | ||||||| ||| || | || |||| || ||||| Sbjct 1611100 TATCAAGCTGTACTGTTACATACTCTCAGCATCGGTACAAGGCCATCGGCATTGCCATTA 1611041 Query 54260 GTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCT 54319 ||||| | | |||||| ||||| || | |||| ||| | | | ||| | |||| Sbjct 1611040 GTCCCAGCAACATAGCTGCCACTAGCTCAAATACAACTCACAGCAACACCAACTTCCCCA 1610981 Query 54320 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 54379 || |||||| || ||||| ||| | || | || ||||| ||||| | | || || Sbjct 1610980 GCAGATTTAGAAATCAATGCACATTGCTTGAGAGTGTCATAAATGCCTTTGGTGCTGTCG 1610921 Query 54380 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA-CGACTAGTTCCCGCATTAAA 54438 || ||||| | || || ||||||||||| | || |||| | | | || || ||||| | Sbjct 1610920 TCTTTCATGCTCAGAAGTAAACAGCTAGAAAGTT-GTGAGCCATTGGTGCCAGCATTGA- 1610863 Query 54439 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGC 54498 | |||| || || || ||||| || ||||| || ||||| | || || || Sbjct 1610862 ----GAGTGAGAGGCATGAGTGAACCACTTCTCAGA---GAGGTTGTATATTTCAATTGC 1610810 Query 54499 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 54558 | || || || || |||| ||| | | || | ||| |||||||| || ||||| Sbjct 1610809 AGCATCAATGTCTTCTTTGTGAA--CCT-CAGATACCCTCATCAACATGTGTTGCGGTCT 1610753 >seq44217 Length=341162 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/207 (70%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 21931 TTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 21990 ||| ||||||| | |||||| ||| | || |||| | | || ||||| || |||| || Sbjct 123247 TTGAACTTCTTCTATTTCTGGGTAAAAAATTCGTTCACAAATGAGCTGTGCAATTCGGTC 123188 Query 21991 CCCCGTATTTACATTAAATGTATATTTTCCATTATTAATAAGAATGACTCCTATATTTCC 22050 || | || || | ||| | | ||| ||| ||||| || | || || | |||||| Sbjct 123187 ACCTTTTTTAACTTCAAACTTTTCTTTGCCAAAATTAAATAGTACAACACCAACATTTCC 123128 Query 22051 CCTATAATCTTCGTCTATTACACCGCCTCCTATAT---CAATGCCTTTTAGGGACAGACC 22107 ||||||||||| ||||| ||||| |||||| || | | | |||| | || || Sbjct 123127 TCTATAATCTTCATCTATGACACCAGCTCCTACATCTACGAAGTGTTTTGCAGCCAAGCC 123068 Query 22108 AGACCTAGGAGCTATTCTACCATAGCA 22134 ||| | ||||||| ||| ||||| || Sbjct 123067 AGAACATGGAGCTACTCTTCCATAACA 123041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593344957860000