Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq436 116 3e-21 seq309 113 4e-20 seq42965 111 1e-19 seq130 104 2e-17 seq50 100 2e-16 seq460 95.1 1e-14 seq43265 91.5 1e-13 seq495 89.7 4e-13 seq44605 87.8 2e-12 seq347 87.8 2e-12 seq472 84.2 2e-11 seq46174 82.4 6e-11 seq139 82.4 6e-11 seq5 82.4 6e-11 >seq436 Length=2687165 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||| | || |||| |||| ||| ||||| || |||||||| ||||| | Sbjct 806593 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTAGACTCTTTCTGAATGTTGTAGTCAGAA 806652 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | || |||||||| ||||| ||| | || || ||||||||||| || Sbjct 806653 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 806712 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| || || |||||| ||||| | | | || |||| ||| ||| Sbjct 806713 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACC 806772 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 || | ||| ||||||||||| || | || || ||||| || |||||||||| Sbjct 806773 TCGAGGGTGATGGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCATTTTGA 806824 Score = 107 bits (118), Expect = 2e-18 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | ||| |||| |||| ||| ||||| || |||||||| ||||| | | Sbjct 806368 CCCCTC--AGACGGAGGACCAGGTGCAGAGTAGACTCTTTCTGAATGTTGTAGTCAGAAA 806425 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 | || || | || |||||||| ||||| ||| | || || |||||||| || || | Sbjct 806426 GAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGATCAGGAGGGA 806485 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 |||||| || || |||||| ||||| | | | || |||| ||||||| | Sbjct 806486 TGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCT 806545 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | | ||| |||||||||||||| | || || || || || ||||| Sbjct 806546 CGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 806591 >seq309 Length=2273895 Score = 113 bits (124), Expect = 4e-20 Identities = 159/222 (72%), Gaps = 1/222 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| ||||| |||||||| || || ||||| ||||| | ||| || || | || Sbjct 961372 AGCACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCT 961313 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||||||||||||| | || || | ||||||||| || | ||| | |||||| Sbjct 961312 TCCAGCTGTTTGCCCGCAAATATCAGACGCTGCTGGTCGGATGGGATGCCCTACTTGTCT 961253 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||| || |||| | | | ||||| | |||||| | || | ||| |||||| Sbjct 961252 TGGATTTTGGCCGTCACATTCTCTATGGTATCCCTGGGCTCAGCCTCGAGGGTGATGGTC 961193 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT-TTTGAATCT 21184 ||||| || | || || || || || ||||| |||| |||| Sbjct 961192 TTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTTGCATCT 961151 >seq42965 Length=562198 Score = 111 bits (122), Expect = 1e-19 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | ||| |||| |||| ||||||||||| || ||||| ||||| | | Sbjct 302552 CCACCTCGGAGACGGAGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 302611 Query 21009 AGGGTTTGGGCGTCC----TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 ||| |||||||| ||||||||||| || ||| | || | ||||||||||| Sbjct 302612 AGG----GGGCGTCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGG 302667 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||||||||||| |||||| || || | | | || |||| |||||| Sbjct 302668 AGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTC 302727 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| ||||||||||| |||| || || || || || |||||| Sbjct 302728 GACCTCGAGGGTGATGGTCTTGCCAGTTAGGGTCTTTACGAAGATCTGCATT 302779 Score = 109 bits (120), Expect = 5e-19 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | ||| |||| |||| ||||||||||| || ||||| ||||| | | Sbjct 301412 CCACCTCGGAGACGGAGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 301471 Query 21009 AGGGTTTGGGCGTCC----TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 ||| |||||||| ||||||||||| || ||| | || | ||||||||||| Sbjct 301472 AGG----GGGCGTCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGG 301527 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||||||||||| |||||| || || | | | || |||| |||||| Sbjct 301528 AGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTC 301587 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | || | ||| ||||||||||| || | || || || || || ||||| Sbjct 301588 CACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 301638 Score = 109 bits (120), Expect = 5e-19 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | ||| |||| |||| ||||||||||| || ||||| ||||| | | Sbjct 301640 CCACCTCGGAGACGGAGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 301699 Query 21009 AGGGTTTGGGCGTCC----TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 ||| |||||||| ||||||||||| || ||| | || | ||||||||||| Sbjct 301700 AGG----GGGCGTCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGG 301755 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||||||||||| |||||| || || | | | || |||| |||||| Sbjct 301756 AGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTC 301815 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | || | ||| ||||||||||| || | || || || || || ||||| Sbjct 301816 CACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 301866 Score = 109 bits (120), Expect = 5e-19 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | ||| |||| |||| ||||||||||| || ||||| ||||| | | Sbjct 301868 CCACCTCGGAGACGGAGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 301927 Query 21009 AGGGTTTGGGCGTCC----TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 ||| |||||||| ||||||||||| || ||| | || | ||||||||||| Sbjct 301928 AGG----GGGCGTCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGG 301983 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||||||||||| |||||| || || | | | || |||| |||||| Sbjct 301984 AGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTC 302043 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | || | ||| ||||||||||| || | || || || || || ||||| Sbjct 302044 CACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 302094 Score = 109 bits (120), Expect = 5e-19 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | ||| |||| |||| ||||||||||| || ||||| ||||| | | Sbjct 302096 CCACCTCGGAGACGGAGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 302155 Query 21009 AGGGTTTGGGCGTCC----TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 ||| |||||||| ||||||||||| || ||| | || | ||||||||||| Sbjct 302156 AGG----GGGCGTCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGG 302211 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||||||||||| |||||| || || | | | || |||| |||||| Sbjct 302212 AGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTC 302271 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | || | ||| ||||||||||| || | || || || || || ||||| Sbjct 302272 CACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 302322 Score = 109 bits (120), Expect = 5e-19 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | ||| |||| |||| ||||||||||| || ||||| ||||| | | Sbjct 302324 CCACCTCGGAGACGGAGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 302383 Query 21009 AGGGTTTGGGCGTCC----TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 ||| |||||||| ||||||||||| || ||| | || | ||||||||||| Sbjct 302384 AGG----GGGCGTCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGG 302439 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||||||||||| |||||| || || | | | || |||| |||||| Sbjct 302440 AGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTC 302499 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | || | ||| ||||||||||| || | || || || || || ||||| Sbjct 302500 CACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 302550 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||| ||| ||||| || || ||||| ||||| | |||||| | | || ||||| ||| Sbjct 301208 TGCAGAGTTGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGTTGT 301267 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 || || ||| | || | ||||||||||| || | ||||||||||| |||||| Sbjct 301268 TTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGGATCTTC 301327 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 || || | | | || |||| ||||||| || | ||| ||||||||||| || Sbjct 301328 GCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTC 301387 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 | || || || || || ||||| Sbjct 301388 AGGGTCTTCACGAAGATCTGCAT 301410 >seq130 Length=6872514 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| ||| |||| |||| |||||||| || |||||||| ||||| | Sbjct 3041998 CCACCCCGCAGATGGAGGACCAGGTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAA 3042057 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| | || |||||||| ||||| ||| |||||| ||||||||||| ||| Sbjct 3042058 AGAACATGGCCATCATCCAGCTGCTTGCCTGCAGCAATAAGCCTCTGCTGGTCAGGGGGG 3042117 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 |||||||| || | |||||| ||||| | | || |||||||||||| Sbjct 3042118 ACGCCTTCTTTACCCTGGATCTTGGCCTTCACATTCTCAGTGGTTTCACCGGGCTCCACC 3042177 Query 21129 TCCACGGTAATGGTCTTGCC 21148 || | ||| ||||||||||| Sbjct 3042178 TCGAGGGTGATGGTCTTGCC 3042197 >seq50 Length=2506936 Score = 100 bits (110), Expect = 2e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 20952 CCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGG 21011 |||||||| | ||||||| || | |||||||| || || ||||| ||||| | ||| Sbjct 1731579 CCTCGCAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGC 1731520 Query 21012 GTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACG 21071 || || | ||||||||||||||||||||| | || || | ||||||||| ||| | | Sbjct 1731519 GTGCGGCCATCCTCCAGCTGTTTGCCCGCAAATATCAGACGCTGCTGGTCAGGGGGGATG 1731460 Query 21072 CCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | |||||| ||| || || || | ||| ||||||| |||||| Sbjct 1731459 CCCTTCTTGTCTTGGATTTTGGCCTTGACATTCTCGATGGTATCACTGGGCTC 1731407 >seq460 Length=2238155 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||||||| | ||||||| ||||| |||||||| | || ||||| ||||| | Sbjct 439795 CCACCTCGCAGACACAGCACCAGATGCAGGGTGGACTCTCTCTGGATGTTGTAGTCAGAG 439736 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || || | || |||||||||||||||||| | || || | ||||||||| | Sbjct 439735 ACAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAATATCAGGCGCTGCTGGTCGGGTGAG 439676 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| | | || || || | ||| || |||| |||||| Sbjct 439675 ATGCCCTCCTTGTCTTGGGTTTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 439616 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| ||||||||||| || | || || | || || ||||| || Sbjct 439615 TCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCATGAAGATCTGCATCTT 439566 >seq43265 Length=2440742 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||||| | ||||||| ||| | |||||||| || || ||||||||||| | Sbjct 2202530 CCGCCTCGCACACGCAGCACCAGATGGAGGGTGGACTCTTTCTGGATGTTATAGTCAGAA 2202589 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | || |||||||||||||| ||| | || || | |||||||| || Sbjct 2202590 AGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTTGGGTGGG 2202649 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||| || || || | ||| || |||| |||| Sbjct 2202650 ATGCCCTCCTTGTCTTGGATTTTGGCCTTGACATTCTCGATGGTGTCACTGGGCCTGACC 2202709 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 | | ||| ||||||||||| || | || || || || || ||||| || Sbjct 2202710 TTGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 2202759 >seq495 Length=4822262 Score = 89.7 bits (98), Expect = 4e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 20957 CAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTG 21016 ||| | ||| |||| || | ||| | | || || || || ||||| | || || | Sbjct 1126882 CAGACGGAGAACCAGGTGTAGAGTAGGTGCTTTCTGGATATTGTAGTCAGAAAGAGTGCG 1126823 Query 21017 GGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTC 21076 | | || |||||||| ||||| ||| | || | ||||||||||| ||| | |||||| Sbjct 1126822 GCCATCTTCCAGCTGCTTGCCTGCAAAGATGCGCCTCTGCTGGTCAGGGGGTATGCCTTC 1126763 Query 21077 CTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGT 21136 || || |||||| ||||| | || | || |||| ||| ||| || | ||| Sbjct 1126762 TTTATCCTGGATCTTAGCCTTCACATCCCCAATGGTGTCACTGGGGTCCACCTCTAGGGT 1126703 Query 21137 AATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 ||| ||||||| || || | || ||||| || |||||||||| Sbjct 1126702 GATGCTCTTGCCAGTCAAGGACTTAACAAAGATCTGCATTTTGA 1126659 >seq44605 Length=175201 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/223 (69%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 || || | ||| | ||| | |||||||||||||| ||||| ||||| | || || || Sbjct 639 AGTCTTAACACAAGATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTATGC 698 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 | || |||| ||||||||| ||| |||| ||||| ||||| || || | |||||| Sbjct 699 CCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCGGGAGGAATTCCTTCC 758 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTAT-CACCGGGCTCCGTTTCCACGGT 21136 || | ||| || ||| || | | | |||| || ||| || || | ||| Sbjct 759 TTACCCTGGATTTTGGCTTTTACATTTTCTATTGTATCCAAAGGGTTCAACCTCTAGGGT 818 Query 21137 AATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||||||| || || | ||||| ||||| || ||||| ||| Sbjct 819 GATGGTCTTCCCTGTAAGGGTTTTTACAAAAATCTGCATCTTG 861 >seq347 Length=5549683 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||| | ||| | ||| | |||||||||||||| ||||| ||||| | | Sbjct 1107941 CCACCACGAAGCCTCAACACAAGATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1107882 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | || |||| ||| ||||| ||| |||| ||||| ||||| || || Sbjct 1107881 AGAGTATGCCCATCTTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGA 1107822 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||| ||| | ||| || ||| || | | | ||||| || || Sbjct 1107821 ATTCCTTTCTTACCCTGGATTTTGGCTTTTACATTTTCTATTGTATCCGAAGGTTCAACC 1107762 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||| |||||||| || || | ||||| ||||| || ||||| ||| Sbjct 1107761 TCGAGGGTGATGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCATCTTG 1107711 >seq472 Length=1492349 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || || | ||| | ||| | |||||||||||||| ||||| ||||| | | Sbjct 1223284 CCACCACGAAGTCTCAACACAAGATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1223225 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | |||| |||| ||||||||| ||| |||| ||||| ||||| || || Sbjct 1223224 AAAGTACGCCCGTCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCGGAAGGA 1223165 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||| || ||| || ||| || | | | ||||| || || Sbjct 1223164 ATTTCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCTATTGTATCCGACGGTTCAACC 1223105 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||| |||||||| || || | ||||| || || || ||||| ||| Sbjct 1223104 TCGAGGGTGATGGTCTTCCCTGTGAGGGTTTTTACGAAAATCTGCATCTTG 1223054 >seq46174 Length=2177 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || || | ||| | ||| | |||||||||||||| ||||| ||||| | | Sbjct 1953 CCACCACGGAGTCTCAACACAAGATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1894 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | || |||| ||||||||| ||| |||| ||||| ||||| || | Sbjct 1893 AAAGTACGCCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGATC----AGG 1838 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || ||| || ||| || | | | ||||| || || Sbjct 1837 AGGCCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCTATTGTATCTGACGGTTCAACC 1778 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | |||||||||||| || || | ||||| | || || ||||| ||| Sbjct 1777 TCGAGGGTAATGGTCTTCCCTGTGAGGGTTTTTATGAAAATCTGCATCTTG 1727 >seq139 Length=10686148 Score = 82.4 bits (90), Expect = 6e-11 Identities = 167/247 (68%), Gaps = 7/247 (3%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || |||| ||| | ||||||| || | |||||||| || || ||||| |||| Sbjct 400204 GTTGCCGCCTCACAGACGCAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGCAGTC 400145 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGC------TG 21058 | ||| | || | ||||||||||||||||| ||| | || || | |||| || Sbjct 400144 AGACAGCATGCGGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTGGTG 400085 Query 21059 GTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACC 21118 || ||| | ||| |||||||| ||| || || || | | | || |||| Sbjct 400084 GTGGGGGGGGATGCCCTCCTTGTCTTGGATTTTGGCCTTGACATTCTCCATGGTGTCACT 400025 Query 21119 GGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT-TT 21177 || ||| || | ||| ||||||||||| || | || || || || || ||||| || Sbjct 400024 GGCCTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 399965 Query 21178 TGAATCT 21184 || |||| Sbjct 399964 TGCATCT 399958 >seq5 Length=157846 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || || | ||| | ||| | |||||||||||||| ||||| ||||| | | Sbjct 1272 CCACCACGGAGTCTCAACACAAGATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1213 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | || |||| ||||||||| ||| |||| ||||| ||||| || | Sbjct 1212 AAAGTACGCCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGATC----AGG 1157 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || ||| || ||| || | | | ||||| || || Sbjct 1156 AGGCCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCTATTGTATCTGACGGTTCAACC 1097 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | |||||||||||| || || | ||||| | || || ||||| ||| Sbjct 1096 TCGAGGGTAATGGTCTTCCCTGTGAGGGTTTTTATGAAAATCTGCATCTTG 1046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421998026087000