Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq388 91.5 1e-13 >seq388 Length=3990105 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||| |||||||| ||||| ||||| ||||||||||| || | ||| ||||||||| Sbjct 2992997 TATTCTGCCCCAAAATGTCTCCACTGGAAGCCATAAACAGGACCCAAGTCGCCTTCTTCT 2992938 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 || |||| || | | || ||| || | ||||||||| |||||||| || | | Sbjct 2992937 CTGGTGGAGAATCCCTGGCTGTCCAAAAAGTCTCGAGATCCATTGGCATCCCAGATTTTC 2992878 Query 97522 ACACC 97526 || || Sbjct 2992877 ACTCC 2992873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346569508677500