Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq309 86.0 5e-12 >seq309 Length=2273895 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || || ||| | || ||||| || || ||| |||| | || | || Sbjct 961161 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGCTGAGCCCAGG 961220 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | |||| | ||| | || ||||| | || | ||| | || |||||| Sbjct 961221 GATACCATAGAGAATGTGACGGCCAAAATCCAAGACAAGTAGGGCATCCCATCCGACCAG 961280 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||| | |||| |||||||||||| ||||||||| | ||| || || |||| | Sbjct 961281 CAGCGTCTGATATTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTGTCTGACTACAAC 961340 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTG 25041 || ||||||||| |||| || ||| | ||| Sbjct 961341 ATCCAGAAAGAGTCCACCCTGCATCTGGTG 961370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418045272440000