Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq53 713 0.0 seq48864 307 1e-78 seq79 125 9e-24 seq75 123 3e-23 seq257 111 2e-19 seq199 109 7e-19 seq805 93.3 5e-14 seq44217 87.8 2e-12 >seq53 Length=2810707 Score = 713 bits (790), Expect = 0.0 Identities = 1440/2124 (68%), Gaps = 31/2124 (1%) Strand=Plus/Minus Query 62066 TGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAA 62125 ||| ||| | || | || ||| ||||| || || || | | | |||| || || || Sbjct 1303543 TGCTGGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAATTCTGCTTCCAGCCATAGAA 1303484 Query 62126 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 62185 |||||||| || |||||| ||| | || || || ||||||||||||| ||| ||||| Sbjct 1303483 GTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATATTCAAAGACTGACT 1303424 Query 62186 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTC 62245 |||||| ||||| | | || | || ||||| || | | || || || | ||||| Sbjct 1303423 TTGATCAATGAAAGTATCTCTCTTGGCTGCCATCTTGAGAACAGTTTTCTGGGAGATTTC 1303364 Query 62246 CCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG-TAT--TCTGAATGGA 62302 ||| ||||| ||||||| | ||| | || || | || | || ||| |||| || || Sbjct 1303363 CCACATAGTCTTATAAAGTTCCTTCAGGTCATCAGTAATTTCTGGTATGCTCTGGATAGA 1303304 Query 62303 TCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62362 ||| | | |||||| ||| || ||||| |||||||| || | ||| || | Sbjct 1303303 GCCATTGCATGCAATAATCTGATTTTTCATCTCTTCATTCCACAAGCCCCACTCAGTAAG 1303244 Query 62363 AACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTA 62422 | || | || | || || || || | || |||||||| ||||| ||||| ||||||| Sbjct 1303243 ATCTTTCAGTAAGTGAGGATTTACAATCTGAAATTCTCCTGACAAGACTCTGTGAGTGTA 1303184 Query 62423 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62482 || || |||||||| ||||| | ||||||||||| ||||| || |||||||||| || Sbjct 1303183 GATGTTGCTGGTATAAGGTTCAATGGACTCATTATTCCCCAAGATCTGAGCAGTTGCAGC 1303124 Query 62483 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62542 ||| | ||| || || | | |||||| ||||| | ||| || || || || || || Sbjct 1303123 AGTAGTCATTGGGGCAATAAGTAAACTGTTTCTTACACCATACTTTGCAATCTTGTCCTT 1303064 Query 62543 TAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAAT 62602 ||| ||| ||| | ||| || || | || |||| ||| || ||||| Sbjct 1303063 GAGAAGTTTCCAGTCCCACAGGTCTGTGGGAGTAACATTCCACACATCATACTGAAGAAT 1303004 Query 62603 ACCGTTACTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTT 62662 | || || | || || |||| || || ||||| || | || | || || | Sbjct 1303003 TTCTTTGCTTACTGGAGAGCCCTCATAGGTTTCCTATGGACCATACTCTTTGGCCAGGTC 1302944 Query 62663 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTG 62722 ||| || || || || || || |||||||| |||| |||||| | |||||| || || Sbjct 1302943 ACAGCTGGCTTCCAAGGCTCCATAATAAATAGTTTGAAAGATTTGCTTATTCAGTAACTG 1302884 Query 62723 TGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAAC 62782 | || || || ||||||||||| | | | ||||| || || || | ||||||| Sbjct 1302883 GACCTCTGGACTTTCAAATGGATATCTCATCAAGATAAAAGCATCAGCCAGAACTTGAAC 1302824 Query 62783 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 62842 ||||| || || || ||| | ||||| || | | || ||||||||||| || || Sbjct 1302823 CCCAATTCCAATGGGGTGATGGCGTTTATTTGATACGTATGCCTCTGGAATAGGGTAGTA 1302764 Query 62843 ATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTT---TGACCACATCCTTCAG 62899 || ||| ||||||||||| | |||| ||||| |||| |||| || || || Sbjct 1302763 GTTTCTATTAATAATTTTATTCAAGTTTCGAACAATGACTTCAGTGACTTCAGCC---AG 1302707 Query 62900 TTTGAGAAAATCAAATCGCCCATCTATT---ACAAACATGTTCAATGCAACAGATGCCAG 62956 || ||| || | ||| | ||| |||| |||| || | || |||| Sbjct 1302706 CTTCTTAAAGTCGTACGTGTGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCCAA 1302647 Query 62957 ATTACACACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTA 63014 ||||| || || ||||| | | || | ||| | || ||| || ||||| || || Sbjct 1302646 GTTACAAACTGCAACCTCCTCTTTGCTG--GTATACTCTACTATTTCTGTGCACAGGTTG 1302589 Query 63015 CTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAA 63074 || || ||||| | ||| | || || || || ||||| | ||||| | || || || Sbjct 1302588 CTGCATTTGATTGCTCCCAGGTTCTGCTGGTTGCTCTTATGATTACAGGAATTTTTGTAG 1302529 Query 63075 AGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCG 63133 || ||| | || || |||| || ||||||| || ||||| || | ||| | | || | Sbjct 1302528 AGCATGTAGGG-GTGTCAGTCTCTGTCTGAGACTCAATAATAGCATACCAAAGCTGCT-G 1302471 Query 63134 AGCCTTTA-----TTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGT 63188 ||| || | || | || || || ||| ||| | | | | |||| || Sbjct 1302470 AGCTTTCACAACTTTGTGAATGTGACCCTGCTT-CTCATACTTTTCA--TATAGCTTC-- 1302416 Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 || || || ||||||||||| | |||| | |||||| |||| ||||||||||| ||| Sbjct 1302415 TCAAATTCTTCTCCCCAAACTTCATCCAGGCCAGGACACTCATTTGGACACATCAAAGAC 1302356 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308 || || | | | ||| | |||||| |||||||| | ||||||||| || | || Sbjct 1302355 CAGTCCTGATTAGTTTCCACCCATTTCATGAAGAGATCTGAAATCCAAAGGGCAAAGAAA 1302296 Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368 ||||| || | ||||| || |||||||| ||||| || | |||||| ||| | | Sbjct 1302295 AGATCCCTCGCATGCTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGAAACTCAAAG 1302236 Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428 || || ||||| | |||| || ||| || || | | ||| | || |||||||| || Sbjct 1302235 ATGTCTAAATGCTAAGGTTTCAGGTAAATAGCAAATGCCCCAAGACGCTTGTTTCCACCT 1302176 Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488 ||||||| ||||| ||| || ||| | || ||||||| |||||| | || || || || Sbjct 1302175 TGATCTACGTATCGAGCTGTATTACTGTATACTCTCAGCATTGGTACAAGGCCATTGGAA 1302116 Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCT 63548 | ||||| || || | | |||| ||| | || |||||| ||| | | | ||| Sbjct 1302115 TTGCCATTAGTCCCAGCAAGGTAGCTGCCAGTAGCCCGAATACAACTCACAGCAACACCA 1302056 Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCT 63608 |||||||| || ||||| || || || || | |||| || ||||| || ||||| Sbjct 1302055 ATTCCCCCAGCAGACTTAGAAATCAAAGCACACTGCTTTAGAGTATCATAAATCCCTTCA 1301996 Query 63609 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCC 63668 ||||| ||||| ||||||| || || ||| || |||| | || | ||| | || || Sbjct 1301995 ATGCTGTCATCTTTCATGTTCAGAAGGAAATAGGTAGAAAGTTCTGGGCGATTGGTGCCA 1301936 Query 63669 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63728 ||||| || | || ||||| || || || ||||| || |||||||| || || || || Sbjct 1301935 GCATTGAAGAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGAAAGAAGGTTATATGTT 1301876 Query 63729 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63788 ||||| || | || || || || ||||| || || | || | ||| |||||||| Sbjct 1301875 TCAATTGCAGCATCAATGTCTTCTTTGTGAATCCCCACAGATACCCTCATCAACATGTGT 1301816 Query 63789 TGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63848 || ||||| ||| | | ||| | || |||||||| ||||| | ||||| | ||| Sbjct 1301815 TGCGGTCTGTCAGCCACTTTCCCACTAATCTTCAACAAATAGGACTGCTCCAATGCCTTA 1301756 Query 63849 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCC 63908 || |||||||| ||||| ||||| ||||| || || || || | ||||| || ||| Sbjct 1301755 AAGCCAAAATAATTGTAAGAAAAATCTCGATCATAGATGATGGCAGAATTTAGGCAATCT 1301696 Query 63909 TTATATTTGTTAACTATATCCATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATT 63967 |||| ||| || |||| || |||| | | || | ||| ||||| ||||| Sbjct 1301695 TTATTGGCCAAAACAATGTCCAGTGT-TGACTTGGCCACCATGGAAGAGTGTTTGCCATT 1301637 Query 63968 TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTC 64027 | ||||| | |||||| | | || |||||||| |||||||| | ||| |||||||| Sbjct 1301636 ATGTGGATTTATGTAGTTGTAAAGGTCTTCCATCACATCACTAAACATTTTCTTTGTTTC 1301577 Query 64028 CTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGT 64087 ||||| | || |||| || || || || || ||||||||||| || || || | || Sbjct 1301576 TTTGTGCAAGTTAGATACAGCAATCCTTGCTGCCAGAATGGCATAGTCAGGGTGCTTAGT 1301517 Query 64088 AGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATT 64147 ||| | || || ||| |||| || |||| ||| || | ||| ||| | || || ||| | Sbjct 1301516 AGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGTTCAACCATGGTGACCCCACT 1301457 Query 64148 ATATATTCCTTGAATAACCTTCAT 64171 ||| | ||||| || || ||||| Sbjct 1301456 ATACAAGCCTTGGATTACTTTCAT 1301433 >seq48864 Length=438413 Score = 307 bits (340), Expect = 1e-78 Identities = 552/801 (69%), Gaps = 13/801 (2%) Strand=Plus/Plus Query 33238 AAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTTTT 33294 |||||||| ||||||| | |||| ||| || | || |||||||||||||| | | Sbjct 419683 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 419742 Query 33295 GGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCA 33354 | || ||||| || | || || || || ||||| |||||||||| | | ||||| |||| Sbjct 419743 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 419802 Query 33355 TGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAATC 33414 | || ||||| ||||| || || ||| | ||||||||| ||| || | || Sbjct 419803 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 419862 Query 33415 TATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAA 33474 ||| || || || || || || ||||||| | || ||||| | ||||| || | Sbjct 419863 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 419921 Query 33475 CTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGAT-ACCGCATTTGTTATAATAAAT 33533 | || | |||| | || || || || ||||| | | || ||||| | || || | Sbjct 419922 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCATTGATAATGATTTCT 419981 Query 33534 CTAACGGTTTCTTCACT--CGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAAT 33591 | || | ||| | || ||| |||| | |||| ||||||| | || | || Sbjct 419982 TTCAC--TCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACAT 420039 Query 33592 CGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTA 33651 ||||| | || ||| ||||| ||||| | ||| || ||||| ||||| || ||||| | Sbjct 420040 TACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATCA 420099 Query 33652 GGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTA 33711 | | || | || ||||| ||||| | || || || || | ||||||||||||||||| Sbjct 420100 GTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGCCAGTAAAGAAGATTCCTTCTA 420159 Query 33712 CTGCAGCAAAGGCAATAAGTCTCTCTCCATAA----CCGGCGCTGTCATGTATCCACTTT 33767 |||| ||||| || | | | |||||||| || | |||| ||||| Sbjct 420160 CTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTTGTCCCCAATCCAACGC 420219 Query 33768 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33827 |||||||| |||| ||| || ||||||||||| ||||| |||||| | |||||| | Sbjct 420220 AAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAAT 420279 Query 33828 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33887 | |||| || |||||||| ||||| || || | | |||||||||||| ||| | Sbjct 420280 TCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGGT 420339 Query 33888 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947 |||||||| ||||| || || || || || ||||| | || || ||||| | |||||| Sbjct 420340 ATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTCT 420399 Query 33948 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCC 34007 | |||||| || | | |||||||| || || ||||||| ||| |||| || ||| Sbjct 420400 TGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGCC 420459 Query 34008 AATACATGTTTTATAAAATAT 34028 | ||||| ||| |||||| Sbjct 420460 AGAACATGGGATATGAAATAT 420480 Score = 302 bits (334), Expect = 6e-77 Identities = 551/801 (69%), Gaps = 13/801 (2%) Strand=Plus/Plus Query 33238 AAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTTTT 33294 |||||||| ||||||| | |||| ||| || | || |||||||||||||| | | Sbjct 414760 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 414819 Query 33295 GGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCA 33354 | || ||||| || | || || || || ||||| |||||||||| | | ||||| |||| Sbjct 414820 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 414879 Query 33355 TGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAATC 33414 | || ||||| ||||| || || ||| | ||||||||| ||| || | || Sbjct 414880 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 414939 Query 33415 TATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAA 33474 ||| || || || || || || ||||||| | || ||||| | ||||| || | Sbjct 414940 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 414998 Query 33475 CTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGAT-ACCGCATTTGTTATAATAAAT 33533 | || | |||| | || || || || ||||| | | || ||||| | || || | Sbjct 414999 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCATTGATAATGATTTCT 415058 Query 33534 CTAACGGTTTCTTCACT--CGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAAT 33591 | || | ||| | || ||| |||| | |||| ||||||| | || | || Sbjct 415059 TTCAC--TCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACAT 415116 Query 33592 CGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTA 33651 ||||| | || ||| ||||| ||||| | ||| || ||||| ||||| || ||||| | Sbjct 415117 TACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATCA 415176 Query 33652 GGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTA 33711 | | || | || ||||| ||||| | || || || | | ||||||||||||||||| Sbjct 415177 GTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGACAGTAAAGAAGATTCCTTCTA 415236 Query 33712 CTGCAGCAAAGGCAATAAGTCTCTCTCCATAA----CCGGCGCTGTCATGTATCCACTTT 33767 |||| ||||| || | | | |||||||| || | |||| ||||| Sbjct 415237 CTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTTGTCCCCAATCCAACGC 415296 Query 33768 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33827 |||||||| |||| ||| || ||||||||||| ||||| |||||| | |||||| | Sbjct 415297 AAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAAT 415356 Query 33828 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33887 | |||| || |||||||| ||||| || || | | |||||||||||| ||| | Sbjct 415357 TCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGGT 415416 Query 33888 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947 |||||||| ||||| || || || || || ||||| | || || ||||| | |||||| Sbjct 415417 ATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTCT 415476 Query 33948 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCC 34007 | |||||| || | | |||||||| || || ||||||| ||| |||| || ||| Sbjct 415477 TGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGCC 415536 Query 34008 AATACATGTTTTATAAAATAT 34028 | ||||| ||| |||||| Sbjct 415537 AGAACATGGGATATGAAATAT 415557 >seq79 Length=8883450 Score = 125 bits (138), Expect = 9e-24 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || |||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 707237 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 707296 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 ||||||||||| ||||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 707297 GACTCATTATTCCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 707356 Query 62508 CTATTTCTAAGACCGTA 62524 || ||||| | ||| || Sbjct 707357 CTGTTTCTTACACCATA 707373 Score = 105 bits (116), Expect = 8e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172 |||| || || || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 703085 TCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATGT 703144 Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232 ||| ||| ||||||||||| ||||| || || || || || ||||| || | | || | Sbjct 703145 TCAAAGACTGACTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTTT 703204 Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283 | || | |||||||| | ||| ||||||| | |||| | || || |||| Sbjct 703205 TCTGGGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 703255 Score = 100 bits (110), Expect = 4e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685 |||| || |||||||| || | || | || || | |||||| || || || || || | Sbjct 728189 CATAGGTTTCATATGGACCGTACTCTTTGGCCAGGTCACAACTGGCTTCCAAGGCTCCAT 728248 Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745 ||||||| ||||||||||| | |||||| || || || || || || ||||| |||| Sbjct 728249 AATAAATAGTTTCAAAGATTTGCTTATTCAGTAACTGGGCCTCTGGACTCTCAAAAGGAT 728308 Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805 | | | | ||||| ||||| || | |||||||| ||||| || || || | ||| | Sbjct 728309 ATCTCATCAAGATAAAAGCGTCGGCCAGACCTTGAACCCCAATTCCAATGGGGCGATGGC 728368 Query 62806 TCTTATTAGA 62815 ||||| || Sbjct 728369 GTTTATTTGA 728378 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 63266 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATG 63325 |||||||||||| |||||||| ||||||||||| || | || ||||| || | | || Sbjct 735386 CACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCCCTGGCACGCTG 735445 Query 63326 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63385 || || |||||||| ||||| || | |||||| ||| | | || || ||||||| || Sbjct 735446 CTCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGAAACTCAAAGATGTCTAAATGCCAAGG 735505 Query 63386 TTCCAAGTATATGGC 63400 ||||| ||| || || Sbjct 735506 TTCCAGGTAAATAGC 735520 Score = 96.9 bits (106), Expect = 4e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 64006 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAA 64065 ||||||| | ||| |||||||| ||||| | || |||| || || || || || |||| Sbjct 753043 CACTAAACACTTTCTTTGTTTCTTTGTGCAAGTTAGATACAGCAATCCTTGCTGCCAGAA 753102 Query 64066 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64125 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 753103 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 753162 Query 64126 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64171 ||| ||| | || || ||| |||| | ||||| || || ||||| Sbjct 753163 GTTCAACCATGGTGACCCCACTATACAAGCCTTGGATTACTTTCAT 753208 >seq75 Length=11204613 Score = 123 bits (136), Expect = 3e-23 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| ||||| | ||| |||||||| ||||| |||||||| || || || || | Sbjct 8448220 CCTCATCTCTGCTAATCAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCT 8448279 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| ||||| || || || || || ||||||||||||||||||||||| ||||||| Sbjct 8448280 TGAGCCAGAATATTGATGCAAACGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGG 8448339 Query 33724 C 33724 | Sbjct 8448340 C 8448340 Score = 95.1 bits (104), Expect = 2e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901 |||||||| ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 8452278 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 8452337 Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 33961 || || || || |||||||| | || || || ||||| |||||| | |||||| || Sbjct 8452338 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTTATCTGAACTTCTTGGCTAAATCGCTC 8452397 >seq257 Length=3874894 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 |||||||||||||||| | ||| || | ||||| || || ||||| ||||||| ||| Sbjct 866284 GTTACTTTCTATGATGTGTATATTATTCTGCAAGCCTTTATACTGACTTCTGCAGTATTT 866225 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 |||| | ||||| ||| |||||||||||| ||||||||||||| ||| ||| | |||| Sbjct 866224 CTTGGTTTGACTGCATATACTCTACAATCTCAGAGAGATTTCAGCAAATTTGGAGCAGG 866166 >seq199 Length=4383281 Score = 109 bits (120), Expect = 7e-19 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| || || | ||| || ||||| || ||||| ||||| || || | ||| | Sbjct 4204743 CCTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCT 4204684 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| ||||| | ||| || ||||| || ||||| ||||||||||| |||||||||| Sbjct 4204683 TCAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 4204624 Query 33724 CAATAAGTCT 33733 | | || ||| Sbjct 4204623 CCACAACTCT 4204614 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 ||||||||||| || ||||||||||||||||||||||| || || | || |||||| Sbjct 4196938 AAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGATGTGAGAGATAAAA 4196879 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 34074 || ||||| ||||| |||| |||||||| | | || ||| || |||| Sbjct 4196878 TACTTTTCATCTGGCTTTAGCTTATTCCAGTGAGGGAGATCCTTTGATA 4196830 >seq805 Length=2268304 Score = 93.3 bits (102), Expect = 5e-14 Identities = 240/360 (67%), Gaps = 13/360 (4%) Strand=Plus/Minus Query 63438 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTG 63497 |||| ||| || | ||| | ||||||| ||| || | || || | | | ||||| Sbjct 1611100 TATCAAGCTGTACTGTTACATACTCTCAGCATCGGTACAAGGCCATCGGCATTGCCATTA 1611041 Query 63498 GTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 63557 || || | | ||||| ||||| || | |||| ||| | | | ||| | | |||| Sbjct 1611040 GTCCCAGCAACATAGCTGCCACTAGCTCAAATACAACTCACAGCAACACCAACTTCCCCA 1610981 Query 63558 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCA 63617 || |||||| || ||||| ||| | || | |||||||| ||||||| |||| || Sbjct 1610980 GCAGATTTAGAAATCAATGCACATTGCTTGAGAGTGTCATAAATGCCTTTGGTGCTGTCG 1610921 Query 63618 TCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA-CGAGTAGTTCCCGCATTAAA 63676 || ||||| | || || ||||||||||| | || |||| | | | || || ||||| | Sbjct 1610920 TCTTTCATGCTCAGAAGTAAACAGCTAGAAAGTT-GTGAGCCATTGGTGCCAGCATTGA- 1610863 Query 63677 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63736 | |||| || || || ||||| || ||||| || ||||| | ||||| || Sbjct 1610862 ----GAGTGAGAGGCATGAGTGAACCACTTCTCAGA---GAGGTTGTATATTTCAATTGC 1610810 Query 63737 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63796 | || || || || |||| ||| | | || | ||| |||||||| || ||||| Sbjct 1610809 AGCATCAATGTCTTCTTTGTGAA--CCT-CAGATACCCTCATCAACATGTGTTGCGGTCT 1610753 >seq44217 Length=341162 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/207 (70%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 31347 TTGTACTTCTTCAAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 31406 ||| |||||||| | |||||| ||| | || |||| | | || ||||| || |||| || Sbjct 123247 TTGAACTTCTTCTATTTCTGGGTAAAAAATTCGTTCACAAATGAGCTGTGCAATTCGGTC 123188 Query 31407 TCCAGTATTTACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCC 31466 || | || || | |||| | ||| ||| ||||| || | || || | ||||| Sbjct 123187 ACCTTTTTTAACTTCAAACTTTTCTTTGCCAAAATTAAATAGTACAACACCAACATTTCC 123128 Query 31467 CCTATAATCTTCGTCTATTACACCGCCTCCTATAT---CAATGCCTTTTAGGGACAGACC 31523 ||||||||||| ||||| ||||| |||||| || | | | |||| | || || Sbjct 123127 TCTATAATCTTCATCTATGACACCAGCTCCTACATCTACGAAGTGTTTTGCAGCCAAGCC 123068 Query 31524 AGACCTAGGAGCTATTCTACCATAGCA 31550 ||| | ||||||| ||| ||||| || Sbjct 123067 AGAACATGGAGCTACTCTTCCATAACA 123041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629418059460000