Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq53 347 1e-90 seq48864 194 2e-44 seq75 129 5e-25 seq79 107 2e-18 seq199 104 2e-17 >seq53 Length=2810707 Score = 347 bits (384), Expect = 1e-90 Identities = 1199/1848 (65%), Gaps = 33/1848 (2%) Strand=Plus/Minus Query 36805 ATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTC 36864 || ||||| | ||| | | |||| || | ||||||||| ||||| || | | || Sbjct 1303554 ATTGGATTAGCTGCTGGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAATTCTGCTTC 1303495 Query 36865 CATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTC 36924 || || || || ||||||||||| ||||| | || |||| | | | |||| || || Sbjct 1303494 CAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATATTC 1303435 Query 36925 ATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTT 36984 | || ||||||||||| || || | | |||| | ||||||||| | | || | ||| Sbjct 1303434 AAAGACTGACTTTGATCAATGAAAGTATCTCTCTTGGCTGCCATCTTGAGAACAGTTTTC 1303375 Query 36985 TGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCTAA-ATG 37043 || || || ||||| | || ||||| | || || | | ||| | | ||| ||| Sbjct 1303374 TGGGAGATTTCCCACATAGTCTTATAAAGTTCCTTCAGGTCATCAGTAATTTCTGGTATG 1303315 Query 37044 TT--GAATAGAACCATT--ATGTAACACAATTGTATTCTTTATGTCATTATTCCACATAT 37099 | | ||||| ||||| ||| || | || ||| || || || | |||||||| | Sbjct 1303314 CTCTGGATAGAGCCATTGCATGCAATA--ATCTGATTTTTCATCTCTTCATTCCACA-AG 1303258 Query 37100 TTCTACTTATTA-GTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAAT 37158 | ||| | || | ||| ||| || ||| |||||||||| |||||| ||||| || || Sbjct 1303257 CCCCACTCAGTAAGATCTTTCAGTAAGTGAGGATTTACAATCTGAAATTCTCCTGACAAG 1303198 Query 37159 ACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATT 37218 ||||| || || || ||||| ||||| |||||||||||||||||||| | || || Sbjct 1303197 ACTCTGTGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGACTCATTATTCCCCAAGATC 1303138 Query 37219 TGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTA 37278 |||| || | ||||||| |||||| || || || | || ||||| | |||| | Sbjct 1303137 TGAGCAGTTGCAGCAGTAGTCATTGGGGCAATAAGTAAACTGTTTCTTACACCATACTTT 1303078 Query 37279 TTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGG-GT-TCTTTAACCACA 37336 ||| | | || || ||||| ||||| | ||||| || || | || ||||| Sbjct 1303077 GCAATCTTGTCCTTGAGAAGTTTCCAGTCCCACAGGTCTGTGGGAGTAACATT--CCACA 1303020 Query 37337 TATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGT 37396 |||||| || ||||| |||| || ||||||| | | ||| || || || || || | Sbjct 1303019 CATCATACTGAAGAATTTCTTTGCTTACTGGAGAGCCCTCATAGGTTTCCTATGGACCAT 1302960 Query 37397 AAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTT 37456 | ||| || || || || || | ||| | || ||||||| || |||| || |||| Sbjct 1302959 ACTCTTTGGCCAGGTCACAGCTGGCTTCCAAGGCTCCATAATAAATAGTTTGAAAGATTT 1302900 Query 37457 GTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACAT 37516 | |||| | || | | ||| || || |||| ||| | || || ||||| ||| Sbjct 1302899 GCTTATTCAGTAACTGGACCTCTGGACTTTCAAATGGATATCTCATCAAGATAAAAGCAT 1302840 Query 37517 CAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATT 37576 |||||| | | ||||| || || || ||||| ||| ||||| ||| | | | Sbjct 1302839 CAGCCAGAACTTGAACCCCAATTCCAATGGGGTGATGGCGTTTATTTGATACGTATGCCT 1302780 Query 37577 CTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCG 37636 || | || || || || ||| || |||||||| | ||| ||| | | || | Sbjct 1302779 CTGGAATAGGGTAGTAGTTTCTATTAATAATTTTATTCAAGTTTCGAACAATGACTTCAG 1302720 Query 37637 TAATTATTCTCAACTTGTCGAA--CATAAATACGTTATTAT-TAACAAATTTACTCAACG 37693 | | | || ||| | || | || | ||| | || | ||| | || ||| | Sbjct 1302719 TGACTTCAGCCAGCTTCTTAAAGTCGTACGTGTGTTCTGATGTGACATACATATTCAGGG 1302660 Query 37694 AAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTG 37753 | || | | ||||| || ||||| || |||| | | || | | || || |||| Sbjct 1302659 CCAGGGAAGCCAAGTTACAAACTGCAACCTCCTCTTTGCTGGTATACTCTACTATTTCTG 1302600 Query 37754 TACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAG 37813 | || || || || || | |||| ||||| || || ||| || | |||||| | Sbjct 1302599 TGCACAGGTTGCTGCATTTGATTGCTCCCAGGTTCTGCTGGTTGCTCTTATGATTACAGG 1302540 Query 37814 AATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCC 37873 ||| ||| || || || || || || | ||| | |||| ||| ||||||| | || Sbjct 1302539 AATTTTTGTAGAGCATGTA-GGGGTGTCAGTCTCTGTCTGAGACTCAATAATAGCATACC 1302481 Query 37874 ATAAACTTCT-TGCTTTAACGATCGCTTT---AAtttttttCTTTGTTTCGTATTCTATA 37929 | || || || ||||| || | |||| ||| | || | || || | | | Sbjct 1302480 A-AAGCTGCTGAGCTTTCACAA---CTTTGTGAATGTGACCCTGCTTCTCATACTTTTCA 1302425 Query 37930 TATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACAC 37989 |||| || | ||| || | ||||| || || | || ||||| || ||||||| Sbjct 1302424 TATAGCTTCTCAAATTCTTCTCCCCAAACTTCATCCAGGCCAGGACACTCATTTGGACAC 1302365 Query 37990 ATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAAT 38049 || | |||||| || | || |||| || | || ||| || | ||| | | ||| | Sbjct 1302364 ATCAAAGACCAGTCCTGATTAGTTTCCACCCATTTCATGAAGAGATCTGAAATCCAAAGG 1302305 Query 38050 GCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGA 38109 ||| || | ||| | | | |||||| || ||| ||||| |||| ||| Sbjct 1302304 GCAAAGAAAAGATCCCTCGCATGCTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGA 1302245 Query 38110 AAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTA 38169 || || || || || ||| | |||| | ||||| | | ||| || | | || Sbjct 1302244 AACTCAAAGATGTCTAAATGCTAAGGTTTCAGGTAAATAGCAAATGCCCCAAGACGCTTG 1302185 Query 38170 TCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATA 38229 | || || |||| | |||| | |||| ||| | |||| ||| | ||| ||||| | Sbjct 1302184 TTTCCACCTTGATCTACGTATCGAGCTGTATTACTGTATACTCTCAGCATTGGTACAAGG 1302125 Query 38230 CCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATC 38289 ||||| || ||||| || | || | | || | || |||| || ||| ||| | Sbjct 1302124 CCATTGGAATTGCCATTAGTCCCAGCAAGGTAGCTGCCAGTAGCCCGAATACAACTCACA 1302065 Query 38290 GACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAAT 38349 | | || ||||| || ||| || || || ||||| || || |||| |||||| | Sbjct 1302064 GCAACACCAATTCCCCCAGCAGACTTAGAAATCAAAGCACACTGCTTTAGAGTATCATAA 1302005 Query 38350 ATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACA-TTTGAGGCAA 38408 || ||||| || |||||||| || || || | ||| | |||| | || ||| | Sbjct 1302004 ATCCCTTCAATGCTGTCATCTTTCATGTTCAGAAGGAAATAGGTAGAAAGTTCTGGGCGA 1301945 Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468 | | || || || || || | || ||||| ||||| ||||||| || || || | | Sbjct 1301944 TTG-GTGCCAGCATTGAAGAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGAAAGAAG 1301886 Query 38469 ATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCAT 38528 ||||||||||| ||| || |||| || || | |||||| || | |||||||||||| Sbjct 1301885 GTTATATGTTTCAATTGCAGCATCAATGTCTTCTTTGTGAATCCCCACAGATACCCTCAT 1301826 Query 38529 TAGCATATGTTGTGGTCTTTCTATTATTTT---ATTATTCTGTTTAAGTAGATACGATTT 38585 | ||| ||||| ||||| || | ||| | || || || | | ||| || | Sbjct 1301825 CAACATGTGTTGCGGTCTGTCAGCCACTTTCCCACTAATC---TTCAACAAATAGGACTG 1301769 Query 38586 TTCTAATGTTTTTATTCCAAAATAACTATATGAATAATCTCTATCGTA 38633 || |||| || | ||||||||| | || ||| |||||| ||| || Sbjct 1301768 CTCCAATGCCTTAAAGCCAAAATAATTGTAAGAAAAATCTCGATCATA 1301721 >seq48864 Length=438413 Score = 194 bits (214), Expect = 2e-44 Identities = 507/762 (67%), Gaps = 26/762 (3%) Strand=Plus/Plus Query 11330 ACCCCCATCTTTTGATATTCACTAACTCGTCGT-TCGAAAAAATTAGTCTTACCTTCTAG 11388 || |||||| | ||||| |||| |||| || | || || || |||||||| ||||| || Sbjct 419730 ACTCCCATCCTCTGATACTCACCTACTC-TCTTCTCAAAGAAGTTAGTCTTTCCTTCCAG 419788 Query 11389 TGATATATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAA 11448 | | |||| |||||||||| ||| ||||| ||| |||| || | | | || | Sbjct 419789 TAAAATATTCTCCATAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAG 419848 Query 11449 CTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCAT 11508 || | | ||||| || || || || || ||||| ||| || | || ||||| Sbjct 419849 TTCCAGCATAAGTCTATTGGCAACAAACTCAATGTACTGCTTCATCAAGCG-CAGTTCAT 419907 Query 11509 ACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTA-TATTAACCGCAT 11567 | || || | ||| || | ||| |||| | ||||||| ||| | | || || |||| Sbjct 419908 CTCAATGAGCTTCACAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCAT 419967 Query 11568 CAATGATTATCGACGT-TATAACTTCCTTAGATGGTGGAT---GTAATAAATGTTTAAAC 11623 |||| || || | | | ||| || | |||| ||| | |||| ||| Sbjct 419968 ---TGATAAT-GATTTCTTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAAC 420023 Query 11624 ATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAAT 11683 || | | |||| || ||| ||||||| || ||||| || || |||||||| |||||| Sbjct 420024 ATCAGGTAGGCAACATTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAAT 420083 Query 11684 GTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAA 11743 || | || ||||||| || ||||| || | ||| ||||| ||||| || |||| | Sbjct 420084 GTGAGACCAGGCATCAGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGCCAGTA 420143 Query 11744 AAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA-------TACCTT 11796 ||||| ||||| || || |||||||| ||||| | ||||||||| | | || Sbjct 420144 AAGAAGATTCCTTCTACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTT 420203 Query 11797 GTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTC 11856 || | | ||||| ||||||||| || | ||| || || || ||| ||||| Sbjct 420204 GTCCCCA---ATCCAACGCAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTC 420260 Query 11857 TATAGCGTTAAATAAATGCATTT--TTTCTATATTATCTCTTACATATGTATCTATTAAT 11914 || || | || | | ||| ||||| | |||| | | || || || || | Sbjct 420261 AATGGCACTGAAGAGAA--ATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGG 420318 Query 11915 AAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGT 11974 |||||||||||||| ||| | || |||||||| || ||||| || ||||| ||||| || Sbjct 420319 AAACTATACATTTCAGAAGGTATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGG 420378 Query 11975 GCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCA 12034 || |||| | | || || ||||| ||| | | || |||||||| || ||| Sbjct 420379 GCTTCTGTAATGTCAACTTCTTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCA 420438 Query 12035 TCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTAT 12076 |||| | | |||| || || || | ||| ||| || ||| Sbjct 420439 TCACATGCTACAAAGAAAGCCAGAACATGGGATATGAAATAT 420480 Score = 190 bits (210), Expect = 2e-43 Identities = 506/762 (66%), Gaps = 26/762 (3%) Strand=Plus/Plus Query 11330 ACCCCCATCTTTTGATATTCACTAACTCGTCGT-TCGAAAAAATTAGTCTTACCTTCTAG 11388 || |||||| | ||||| |||| |||| || | || || || |||||||| ||||| || Sbjct 414807 ACTCCCATCCTCTGATACTCACCTACTC-TCTTCTCAAAGAAGTTAGTCTTTCCTTCCAG 414865 Query 11389 TGATATATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAA 11448 | | |||| |||||||||| ||| ||||| ||| |||| || | | | || | Sbjct 414866 TAAAATATTCTCCATAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAG 414925 Query 11449 CTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCAT 11508 || | | ||||| || || || || || ||||| ||| || | || ||||| Sbjct 414926 TTCCAGCATAAGTCTATTGGCAACAAACTCAATGTACTGCTTCATCAAGCG-CAGTTCAT 414984 Query 11509 ACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTA-TATTAACCGCAT 11567 | || || | ||| || | ||| |||| | ||||||| ||| | | || || |||| Sbjct 414985 CTCAATGAGCTTCACAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCAT 415044 Query 11568 CAATGATTATCGACGT-TATAACTTCCTTAGATGGTGGAT---GTAATAAATGTTTAAAC 11623 |||| || || | | | ||| || | |||| ||| | |||| ||| Sbjct 415045 ---TGATAAT-GATTTCTTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAAC 415100 Query 11624 ATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAAT 11683 || | | |||| || ||| ||||||| || ||||| || || |||||||| |||||| Sbjct 415101 ATCAGGTAGGCAACATTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAAT 415160 Query 11684 GTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAA 11743 || | || ||||||| || ||||| || | ||| ||||| ||||| || ||| | Sbjct 415161 GTGAGACCAGGCATCAGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGACAGTA 415220 Query 11744 AAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA-------TACCTT 11796 ||||| ||||| || || |||||||| ||||| | ||||||||| | | || Sbjct 415221 AAGAAGATTCCTTCTACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTT 415280 Query 11797 GTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTC 11856 || | | ||||| ||||||||| || | ||| || || || ||| ||||| Sbjct 415281 GTCCCCA---ATCCAACGCAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTC 415337 Query 11857 TATAGCGTTAAATAAATGCATTT--TTTCTATATTATCTCTTACATATGTATCTATTAAT 11914 || || | || | | ||| ||||| | |||| | | || || || || | Sbjct 415338 AATGGCACTGAAGAGAA--ATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGG 415395 Query 11915 AAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGT 11974 |||||||||||||| ||| | || |||||||| || ||||| || ||||| ||||| || Sbjct 415396 AAACTATACATTTCAGAAGGTATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGG 415455 Query 11975 GCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCA 12034 || |||| | | || || ||||| ||| | | || |||||||| || ||| Sbjct 415456 GCTTCTGTAATGTCAACTTCTTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCA 415515 Query 12035 TCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTAT 12076 |||| | | |||| || || || | ||| ||| || ||| Sbjct 415516 TCACATGCTACAAAGAAAGCCAGAACATGGGATATGAAATAT 415557 >seq75 Length=11204613 Score = 129 bits (142), Expect = 5e-25 Identities = 109/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| || || ||||||||||||||||| | |||||||||| ||||||||| || Sbjct 8448222 TCATCTCTGCTAATCAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCTTG 8448281 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| ||||| | ||||| || ||||||||||| ||||| || || |||||||| ||| Sbjct 8448282 AGCCAGAATATTGATGCAAACGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGGCT 8448341 Query 11774 ACTACTCTTTCTCC 11787 || || | |||||| Sbjct 8448342 ACAACACGTTCTCC 8448355 >seq79 Length=8883450 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 37122 TAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCT 37181 ||| |||||| | |||||||| ||||| || || ||||| | || || || ||||| Sbjct 707221 TAGTTGTGGACCTCTCACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCT 707280 Query 37182 AGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCAT 37241 ||||| |||||||||||||||||||| | || || |||| || || ||||||||||| Sbjct 707281 GGTATAAGGTTCAATGGACTCATTATTCCCCAAGATCTGAGCAGTTGAAGCAGTAGGCAT 707340 Query 37242 TGGTGCTATTAGAAGGCTATTTCTCAATCCAT 37273 ||| || || || | || ||||| | |||| Sbjct 707341 TGGGGCAATAAGTAAACTGTTTCTTACACCAT 707372 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 36863 TCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTG 36922 |||| || || || ||||||||||| ||||| | || |||| | | | |||| || Sbjct 703085 TCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATGT 703144 Query 36923 TCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATT 36982 ||| || ||||||||||| || || |||||||| ||||||||||| | | || | || Sbjct 703145 TCAAAGACTGACTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTTT 703204 Query 36983 TTTGAGATATCTCCCAAACCGTTTTATATATTTGTTT 37019 | || || || ||||| || || ||||| | ||| || Sbjct 703205 TCTGGGAGATTTCCCACACAGTCTTATAAAGTTGCTT 703241 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 38392 CTAGACATTTGAGG-CAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAA 38450 ||||| | ||| || | || | || || || || || | || ||||| ||||| |||| Sbjct 744935 CTAGAAAGTTGTGGGCGATTG-GTGCCAGCATTGAAGAGAGTGGGAGAGGCATGAGTGAA 744993 Query 38451 CCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAAT 38510 ||| || || || | | ||||||||||| ||| || |||| || || | |||||| Sbjct 744994 CCACTTCTCAGAAAGAAGGTTATATGTTTCAATTGCAGCATCGATGTCTTCTTTGTGAAT 745053 Query 38511 ACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 || | |||||||||||| | ||| ||||| |||||||| Sbjct 745054 CCCCACAGATACCCTCATCAACATGTGTTGCGGTCTTTC 745092 >seq199 Length=4383281 Score = 104 bits (114), Expect = 2e-17 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| || || |||||||| ||||| || | ||| ||||| | |||| || || Sbjct 4204741 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCTTC 4204682 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| |||||||||||||| || || || ||||| ||||| || ||||| ||||| || Sbjct 4204681 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 4204622 Query 11774 ACTACTCTTT 11783 || ||||||| Sbjct 4204621 ACAACTCTTT 4204612 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 11890 ATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGC 11949 |||||||| || || ||||||| ||||| ||||| ||||| |||| ||| || || Sbjct 4198849 ATCTCTTATGTAAGTGTCTATTAGCAAACTGTACATCTCTGAGTGAACATTCTCGATGAG 4198790 Query 11950 TATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACATCC 11995 |||||||| ||||||||||| || ||||||| | ||||| ||| Sbjct 4198789 AATTTGAAAGCCATAGAAACAACGAGCCTCTGGAATTTGTACCTCC 4198744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468227579580000