Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq53 720 0.0 seq48864 279 7e-70 seq257 178 2e-39 seq79 131 2e-25 seq75 123 3e-23 seq199 113 6e-20 seq805 98.7 1e-15 >seq53 Length=2810707 Score = 720 bits (798), Expect = 0.0 Identities = 1441/2124 (68%), Gaps = 31/2124 (1%) Strand=Plus/Minus Query 64859 TGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAA 64918 ||| ||| | || | || ||| ||||| || || || | | | |||| || || || Sbjct 1303543 TGCTGGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAATTCTGCTTCCAGCCATAGAA 1303484 Query 64919 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 64978 |||||||| || |||||| ||| | || || || ||||||||||||| ||| ||||| Sbjct 1303483 GTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATATTCAAAGACTGACT 1303424 Query 64979 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTC 65038 |||||| ||||| | | || | || ||||| || | | || || || | ||||| Sbjct 1303423 TTGATCAATGAAAGTATCTCTCTTGGCTGCCATCTTGAGAACAGTTTTCTGGGAGATTTC 1303364 Query 65039 CCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG-TAT--TCTGAATGGA 65095 ||| ||||| ||||||| | ||| | || || | || | || ||| |||| || || Sbjct 1303363 CCACATAGTCTTATAAAGTTCCTTCAGGTCATCAGTAATTTCTGGTATGCTCTGGATAGA 1303304 Query 65096 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 65155 ||| ||| |||||| ||| || ||||| |||||||| || | ||| || | Sbjct 1303303 GCCATTGCATGCAATAATCTGATTTTTCATCTCTTCATTCCACAAGCCCCACTCAGTAAG 1303244 Query 65156 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 65215 | || | || | || ||||| || | ||||||||||| ||||| ||||| ||||||| Sbjct 1303243 ATCTTTCAGTAAGTGAGGATTTACAATCTGAAATTCTCCTGACAAGACTCTGTGAGTGTA 1303184 Query 65216 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 65275 || || |||||||| ||||| | ||||||||||| ||||| || |||||||||| || Sbjct 1303183 GATGTTGCTGGTATAAGGTTCAATGGACTCATTATTCCCCAAGATCTGAGCAGTTGCAGC 1303124 Query 65276 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 65335 ||| | ||| || || | | |||||| ||||| | ||| || || || || || || Sbjct 1303123 AGTAGTCATTGGGGCAATAAGTAAACTGTTTCTTACACCATACTTTGCAATCTTGTCCTT 1303064 Query 65336 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 65395 ||| ||| ||| | ||| || || | || ||| || ||||| Sbjct 1303063 GAGAAGTTTCCAGTCCCACAGGTCTGTGGGAGTAACATTCCACACATCATACTGAAGAAT 1303004 Query 65396 ACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 65455 | || || | || || |||| || || ||||| || | || | || || || Sbjct 1303003 TTCTTTGCTTACTGGAGAGCCCTCATAGGTTTCCTATGGACCATACTCTTTGGCCAGGTC 1302944 Query 65456 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG 65515 ||| || || || || || || |||||||| |||| ||||| | |||||| || || Sbjct 1302943 ACAGCTGGCTTCCAAGGCTCCATAATAAATAGTTTGAAAGATTTGCTTATTCAGTAACTG 1302884 Query 65516 TGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 65575 | || | || ||||||||||| | | | ||||| || || || | ||||||| Sbjct 1302883 GACCTCTGGACTTTCAAATGGATATCTCATCAAGATAAAAGCATCAGCCAGAACTTGAAC 1302824 Query 65576 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 65635 ||||| || || || ||| | ||||| || | | || ||||||||||| || || Sbjct 1302823 CCCAATTCCAATGGGGTGATGGCGTTTATTTGATACGTATGCCTCTGGAATAGGGTAGTA 1302764 Query 65636 ATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTT---TGACCACATCCTTCAG 65692 || ||| ||||||||||| | |||| ||||| |||| |||| || || || Sbjct 1302763 GTTTCTATTAATAATTTTATTCAAGTTTCGAACAATGACTTCAGTGACTTCAGCC---AG 1302707 Query 65693 TTTGAGAAAATCAAATCGCTCATCTATT---ACAAACATGTTCAATGCAACAGATGCCAG 65749 || ||| || | | ||| | ||| |||| |||| || | || |||| Sbjct 1302706 CTTCTTAAAGTCGTACGTGTGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCCAA 1302647 Query 65750 ATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTA 65807 |||||||| || ||||| | | || | ||| | || ||| || ||||| || || Sbjct 1302646 GTTACAAACTGCAACCTCCTCTTTGCTG--GTATACTCTACTATTTCTGTGCACAGGTTG 1302589 Query 65808 CTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAA 65867 || || ||||| | ||| | || || || || ||||| | ||||| | || || || Sbjct 1302588 CTGCATTTGATTGCTCCCAGGTTCTGCTGGTTGCTCTTATGATTACAGGAATTTTTGTAG 1302529 Query 65868 AGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCG 65926 || ||| | || || |||| || ||||||| || ||||| || | ||| | | || | Sbjct 1302528 AGCATGTAGGG-GTGTCAGTCTCTGTCTGAGACTCAATAATAGCATACCAAAGCTGCT-G 1302471 Query 65927 AGCCTTTA-----TTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGT 65981 ||| || | || | || || || || ||| | | | | | ||| || Sbjct 1302470 AGCTTTCACAACTTTGTGAATGTGACCCTGCTT-CTCATACTTTTCAT--ATAGCTTC-- 1302416 Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 || || || ||||||||||| | |||| |||||||| |||| ||||||||||| ||| Sbjct 1302415 TCAAATTCTTCTCCCCAAACTTCATCCAGGCCAGGACACTCATTTGGACACATCAAAGAC 1302356 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101 || || | | | ||| | |||||| |||||||| | ||||||||| || | || Sbjct 1302355 CAGTCCTGATTAGTTTCCACCCATTTCATGAAGAGATCTGAAATCCAAAGGGCAAAGAAA 1302296 Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161 | ||| || | ||||| || |||||||| ||||| || | |||||| ||| | | Sbjct 1302295 AGATCCCTCGCATGCTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGAAACTCAAAG 1302236 Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221 || || ||||| | |||| || ||| || || | | ||| | || |||||||| || Sbjct 1302235 ATGTCTAAATGCTAAGGTTTCAGGTAAATAGCAAATGCCCCAAGACGCTTGTTTCCACCT 1302176 Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281 ||||||| ||||| ||| || ||| | || ||||||| |||||| | || |||||||| Sbjct 1302175 TGATCTACGTATCGAGCTGTATTACTGTATACTCTCAGCATTGGTACAAGGCCATTGGAA 1302116 Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCT 66341 | ||||| ||||| | | ||||| ||| | || |||||| ||| | | | ||| Sbjct 1302115 TTGCCATTAGTCCCAGCAAGGTAGCTGCCAGTAGCCCGAATACAACTCACAGCAACACCA 1302056 Query 66342 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 66401 |||||||| || ||||| || || || || | |||| |||||||| || || || Sbjct 1302055 ATTCCCCCAGCAGACTTAGAAATCAAAGCACACTGCTTTAGAGTATCATAAATCCCTTCA 1301996 Query 66402 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 66461 || || ||||| ||||||| || || ||| || |||| | || | ||| | || || Sbjct 1301995 ATGCTGTCATCTTTCATGTTCAGAAGGAAATAGGTAGAAAGTTCTGGGCGATTGGTGCCA 1301936 Query 66462 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 66521 ||||| || | || ||||| || || || ||||| || |||||||| || || || || Sbjct 1301935 GCATTGAAGAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGAAAGAAGGTTATATGTT 1301876 Query 66522 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 66581 ||||| || | || || || || ||||| || || | || | ||| |||||||| Sbjct 1301875 TCAATTGCAGCATCAATGTCTTCTTTGTGAATCCCCACAGATACCCTCATCAACATGTGT 1301816 Query 66582 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 66641 || ||||| ||| | | || | || |||||||| ||||| | ||||| | ||| Sbjct 1301815 TGCGGTCTGTCAGCCACTTTCCCACTAATCTTCAACAAATAGGACTGCTCCAATGCCTTA 1301756 Query 66642 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 66701 || |||||||| ||||| ||||| ||||| || || || || | || || || ||| Sbjct 1301755 AAGCCAAAATAATTGTAAGAAAAATCTCGATCATAGATGATGGCAGAATTTAGGCAATCT 1301696 Query 66702 TTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATT 66760 |||| ||| | |||| || |||| | | || | ||| ||||| ||||| Sbjct 1301695 TTATTGGCCAAAACAATGTCCAGTGT-TGACTTGGCCACCATGGAAGAGTGTTTGCCATT 1301637 Query 66761 TTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTC 66820 | ||||| | |||||| | | || |||||||| |||||||| | ||| |||||||| Sbjct 1301636 ATGTGGATTTATGTAGTTGTAAAGGTCTTCCATCACATCACTAAACATTTTCTTTGTTTC 1301577 Query 66821 TTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGT 66880 |||||| | || ||||| || || || || || | ||||||||| || || || | || Sbjct 1301576 TTTGTGCAAGTTAGATACAGCAATCCTTGCTGCCAGAATGGCATAGTCAGGGTGCTTAGT 1301517 Query 66881 AGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATT 66940 ||| | || || ||| |||| || |||| ||| || | ||| ||| | || || ||| | Sbjct 1301516 AGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGTTCAACCATGGTGACCCCACT 1301457 Query 66941 ATATATTCCTTGGATAACCTTCAT 66964 ||| | |||||||| || ||||| Sbjct 1301456 ATACAAGCCTTGGATTACTTTCAT 1301433 >seq48864 Length=438413 Score = 279 bits (308), Expect = 7e-70 Identities = 547/802 (68%), Gaps = 15/802 (2%) Strand=Plus/Plus Query 35814 AAAAATCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTTTT 35870 |||| ||| |||||| | |||| ||| || | || |||||||||||||| | | Sbjct 419683 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 419742 Query 35871 GGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCA 35930 | || ||||| || | || || || || ||||| || ||||| | | | ||||| |||| Sbjct 419743 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 419802 Query 35931 TGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATC 35990 | || || |||||||| || | ||| | ||||||||| ||| || | || Sbjct 419803 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 419862 Query 35991 TATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 36050 ||| || ||||| || || || ||||||| | || ||||| | || || || | Sbjct 419863 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 419921 Query 36051 CTGGAAGAGCCACAGTAAGAAATTCTTGTTCAA-TAGAGACCGCGTCTGTTATAAT-AGA 36108 | || | |||| | || || || || ||||| | | ||| || | | ||||| | Sbjct 419922 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCAT---TGATAATGATT 419978 Query 36109 TATTACTGTTTCTTCACT--CGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 36166 | || | | ||| | || ||| | | | |||| ||||||| | || | | Sbjct 419979 TCTTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACA 420038 Query 36167 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 36226 | ||||||| || ||| ||||| ||||| | ||| |||||||| ||||| || ||||| Sbjct 420039 TTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATC 420098 Query 36227 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 36286 || | || | || ||||| ||||| | ||||| || |||| |||||| ||||||||| Sbjct 420099 AGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGCCAGTAAAGAAGATTCCTTCT 420158 Query 36287 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA----CCGGCACTGTCATGTATCCACTT 36342 ||||| ||||| || | | | |||||||| || | |||| ||||| Sbjct 420159 ACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTTGTCCCCAATCCAACG 420218 Query 36343 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 36402 |||||||| |||| ||| || ||||||||||| || || || ||| | |||||| | Sbjct 420219 CAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAA 420278 Query 36403 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 36462 | |||| || |||||||| || || ||||| | | |||||||||||| ||| | Sbjct 420279 TTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGG 420338 Query 36463 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 36522 |||||||| ||||| ||||| || || || ||||| | || || ||||| | ||||| Sbjct 420339 TATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTC 420398 Query 36523 TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 36582 | | |||||| || | | |||||||| || || || |||| ||| |||| || || Sbjct 420399 TTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGC 420458 Query 36583 CAATACATGTTTTATAAAATAT 36604 || ||||| ||| |||||| Sbjct 420459 CAGAACATGGGATATGAAATAT 420480 Score = 275 bits (304), Expect = 8e-69 Identities = 546/802 (68%), Gaps = 15/802 (2%) Strand=Plus/Plus Query 35814 AAAAATCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTTTT 35870 |||| ||| |||||| | |||| ||| || | || |||||||||||||| | | Sbjct 414760 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 414819 Query 35871 GGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCA 35930 | || ||||| || | || || || || ||||| || ||||| | | | ||||| |||| Sbjct 414820 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 414879 Query 35931 TGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATC 35990 | || || |||||||| || | ||| | ||||||||| ||| || | || Sbjct 414880 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 414939 Query 35991 TATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 36050 ||| || ||||| || || || ||||||| | || ||||| | || || || | Sbjct 414940 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 414998 Query 36051 CTGGAAGAGCCACAGTAAGAAATTCTTGTTCAA-TAGAGACCGCGTCTGTTATAAT-AGA 36108 | || | |||| | || || || || ||||| | | ||| || | | ||||| | Sbjct 414999 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCAT---TGATAATGATT 415055 Query 36109 TATTACTGTTTCTTCACT--CGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 36166 | || | | ||| | || ||| | | | |||| ||||||| | || | | Sbjct 415056 TCTTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACA 415115 Query 36167 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 36226 | ||||||| || ||| ||||| ||||| | ||| |||||||| ||||| || ||||| Sbjct 415116 TTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATC 415175 Query 36227 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 36286 || | || | || ||||| ||||| | ||||| || ||| |||||| ||||||||| Sbjct 415176 AGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGACAGTAAAGAAGATTCCTTCT 415235 Query 36287 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA----CCGGCACTGTCATGTATCCACTT 36342 ||||| ||||| || | | | |||||||| || | |||| ||||| Sbjct 415236 ACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTTGTCCCCAATCCAACG 415295 Query 36343 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 36402 |||||||| |||| ||| || ||||||||||| || || || ||| | |||||| | Sbjct 415296 CAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAA 415355 Query 36403 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 36462 | |||| || |||||||| || || ||||| | | |||||||||||| ||| | Sbjct 415356 TTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGG 415415 Query 36463 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 36522 |||||||| ||||| ||||| || || || ||||| | || || ||||| | ||||| Sbjct 415416 TATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTC 415475 Query 36523 TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 36582 | | |||||| || | | |||||||| || || || |||| ||| |||| || || Sbjct 415476 TTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGC 415535 Query 36583 CAATACATGTTTTATAAAATAT 36604 || ||||| ||| |||||| Sbjct 415536 CAGAACATGGGATATGAAATAT 415557 >seq257 Length=3874894 Score = 178 bits (196), Expect = 2e-39 Identities = 155/193 (80%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 9227 TTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATC 9286 ||| || ||||| | ||||||||| | | | ||||||| ||| |||||||||||||| Sbjct 861675 TTACTTTTTATTGACTGCTTCCAAAAACCGCAGTAGATGCAGGAATAGATTGATGATATC 861734 Query 9287 CAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGA 9346 |||||||| |||||||| |||| ||||| |||||||| || || ||||| || |||| Sbjct 861735 CAAGTAGAGATTGATAGCAGCTAGTACATACTCTTCAGGTGATAGTTTATGCATCAGTGT 861794 Query 9347 GTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAG 9406 ||| ||||||||||| |||||||| ||||| | ||| || || | ||||| || ||||| Sbjct 861795 GTGTGTGTCATAGATGATGAATCCACAGAAAAGAAGAGCTCCCATAGCAGCCAAGACCAA 861854 Query 9407 CTCCACTGTTTCA 9419 ||||||||| ||| Sbjct 861855 CTCCACTGTCTCA 861867 Score = 143 bits (158), Expect = 4e-29 Identities = 103/119 (87%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||||| ||| ||||||||||||| |||||||||||||||||||||| | ||||| Sbjct 866166 CCTGCTCCAAATTTGCTGAAATCTCTCTGAGATTGTAGAGTATATGCAGTCAAACCAAGA 866225 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || ||||||| |||||| || || ||||||| || | || |||||||||||||||||| Sbjct 866226 AATACTGCAGAAGTCAGTATAAAGGCTTGCAGAATAATATACACATCATAGAAAGTAAC 866284 >seq79 Length=8883450 Score = 131 bits (144), Expect = 2e-25 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 707237 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 707296 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 ||||||||||| ||||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 707297 GACTCATTATTCCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 707356 Query 65301 CTATTTCTAAGACCGTA 65317 || ||||| | ||| || Sbjct 707357 CTGTTTCTTACACCATA 707373 Score = 105 bits (116), Expect = 9e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| || || || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 703085 TCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATGT 703144 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 ||| ||| ||||||||||| ||||| || || || || || ||||| || | | || | Sbjct 703145 TCAAAGACTGACTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTTT 703204 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 | || | |||||||| | ||| ||||||| | |||| | || || |||| Sbjct 703205 TCTGGGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 703255 Score = 105 bits (116), Expect = 9e-18 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 ||||||| | ||| |||||||||||||| | || ||||| || || || || || | || Sbjct 753043 CACTAAACACTTTCTTTGTTTCTTTGTGCAAGTTAGATACAGCAATCCTTGCTGCCAGAA 753102 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 753103 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 753162 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||| ||| | || || ||| |||| | |||||||| || ||||| Sbjct 753163 GTTCAACCATGGTGACCCCACTATACAAGCCTTGGATTACTTTCAT 753208 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 66059 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATG 66118 |||||||||||| |||||||| ||||||||||| || | || | ||| |||| | || Sbjct 735386 CACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCCCTGGCACGCTG 735445 Query 66119 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGG 66178 || || |||||||| ||||| || | |||||| ||| | | || || ||||||| || Sbjct 735446 CTCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGAAACTCAAAGATGTCTAAATGCCAAGG 735505 Query 66179 TTCCAAGTATATGGC 66193 ||||| ||| || || Sbjct 735506 TTCCAGGTAAATAGC 735520 >seq75 Length=11204613 Score = 123 bits (136), Expect = 3e-23 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| ||||| | ||| || ||||| ||||| |||||||| || || || || | Sbjct 8448220 CCTCATCTCTGCTAATCAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCT 8448279 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| ||||| || ||||| || ||||||||||| |||||||||||||| ||||||| Sbjct 8448280 TGAGCCAGAATATTGATGCAAACGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGG 8448339 Query 36300 C 36300 | Sbjct 8448340 C 8448340 Score = 100 bits (110), Expect = 4e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||||| || || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 8452278 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 8452337 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537 ||||| || || |||||||| | || || || ||||| |||||| | |||||| || Sbjct 8452338 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTTATCTGAACTTCTTGGCTAAATCGCTC 8452397 >seq199 Length=4383281 Score = 113 bits (124), Expect = 6e-20 Identities = 103/130 (79%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| || || | ||| |||||||| || ||||| ||||| || || | ||| | Sbjct 4204743 CCTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCT 4204684 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| ||||| | ||||| ||||| || ||||||||||||||||| || ||||||| Sbjct 4204683 TCAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 4204624 Query 36300 CAATAAGTCT 36309 | | || ||| Sbjct 4204623 CCACAACTCT 4204614 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 36542 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 36601 ||||||||||| || ||||| ||||||||||||||||| || || | || |||||| Sbjct 4196938 AAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGATGTGAGAGATAAAA 4196879 Query 36602 TATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 36650 || ||||| | ||| |||| |||||||| | | || ||| || |||| Sbjct 4196878 TACTTTTCATCTGGCTTTAGCTTATTCCAGTGAGGGAGATCCTTTGATA 4196830 >seq805 Length=2268304 Score = 98.7 bits (108), Expect = 1e-15 Identities = 241/360 (67%), Gaps = 13/360 (4%) Strand=Plus/Minus Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290 |||| ||| || | ||| | ||||||| ||| || | || |||| || | ||||| Sbjct 1611100 TATCAAGCTGTACTGTTACATACTCTCAGCATCGGTACAAGGCCATCGGCATTGCCATTA 1611041 Query 66291 GTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCT 66350 ||||| | | |||||| ||||| || | |||| ||| | | | ||| | | |||| Sbjct 1611040 GTCCCAGCAACATAGCTGCCACTAGCTCAAATACAACTCACAGCAACACCAACTTCCCCA 1610981 Query 66351 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 66410 || |||||| || ||||| ||| | || | || ||||| ||||| | | || || Sbjct 1610980 GCAGATTTAGAAATCAATGCACATTGCTTGAGAGTGTCATAAATGCCTTTGGTGCTGTCG 1610921 Query 66411 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA-CGACTAGTTCCCGCATTAAA 66469 || ||||| | || || ||||||||||| | || |||| | | | || || ||||| | Sbjct 1610920 TCTTTCATGCTCAGAAGTAAACAGCTAGAAAGTT-GTGAGCCATTGGTGCCAGCATTGA- 1610863 Query 66470 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 66529 | |||| || || || ||||| || ||||| || ||||| | ||||| || Sbjct 1610862 ----GAGTGAGAGGCATGAGTGAACCACTTCTCAGA---GAGGTTGTATATTTCAATTGC 1610810 Query 66530 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 66589 | || || || || |||| ||| | | || | ||| |||||||| || ||||| Sbjct 1610809 AGCATCAATGTCTTCTTTGTGAA--CCT-CAGATACCCTCATCAACATGTGTTGCGGTCT 1610753 Score = 96.9 bits (106), Expect = 5e-15 Identities = 454/709 (64%), Gaps = 34/709 (5%) Strand=Plus/Minus Query 65448 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 65507 || || ||||| || || || | || || |||||| ||||||| ||||| | |||||| Sbjct 1613342 GCCAGGTCACAGCTGGCTTCCAGAGCTCCATAATAAGTGGTTTCAAAGATTTGCTTATTC 1613283 Query 65508 AGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 65567 || | || || | || ||||| |||| | | | ||||| || || || | Sbjct 1613282 AGTAACAGGGCCTCTGGACTCTCAAAATGATATCTCATCAAGATAAAAGCATCGGCCAG- 1613224 Query 65568 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 65627 |||||| || || || | || ||||| || | || ||||||||| Sbjct 1613223 --------ACCAATTCCAATGGGGCGATAATGTTTATTTGATAAGCATGCCTCTGGAATA 1613172 Query 65628 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 65687 || || || | | ||| | ||||||||| | |||| |||||| ||||| || | Sbjct 1613171 GGGTAGTAGCTTACATCAACAATTTTATTCAAGTTTCGGACAATGACTTTAGTGACTTGG 1613112 Query 65688 TTCAGTTTGAGAAAATCAAATC---GCTCATCTATTACAAACATGTTCAATGCAACAGAT 65744 |||||| ||| ||| || |||| | | ||| ||| |||| || | || Sbjct 1613111 GCCAGTTTCTTAAAGTCATATGTGTGCTCTGATGTGACATACACATTCAGGGCCATGGAA 1613052 Query 65745 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 65804 ||||| |||||||| || | || | || | ||| | || ||| || ||||| || Sbjct 1613051 GCCAGGTTACAAACTGCAAGTTCTCT-GCTG--GTATACTCTACTATTTCTGTGCACAGG 1612995 Query 65805 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTT------TTTG-TTACACGC 65857 || ||||| | ||| |||| | || || || || ||||| |||| |||| | Sbjct 1612994 TTGCTACATTCGATCATTCCCAGGTTCTGCTGGTTGCTCTTCCTTTTTTTGATTACT-GA 1612936 Query 65858 ATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 65917 ||| || || | | | || |||||| | ||| ||||||| || | ||| || | ||| Sbjct 1612935 ATCTTTGAGGAGCAAGTAGGGGGTACCAATCTCAGTCTGAGACTCAACAATAGCATACCA 1612876 Query 65918 GA-CGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCT--TTCGTATAGTGTATA 65974 | | || |||| | | |||| | | | | || ||| ||| | | Sbjct 1612875 AAGCTGCT-GAGCTTCCCCAAC---TTTGCAAA-CATGACCCTGCTTCTCATACTTCTCA 1612821 Query 65975 CA-ATCGTTCGAACTCGTCTCCCCAAACAT--TGTCCAATCCAGGACATTCATCCGGACA 66031 | | | || || || |||| |||||| || ||| ||||||| |||| ||||| Sbjct 1612820 TATAGCTCTCAAATTCTTCTCTCCAAACTGGATGACCAGGTCAGGACACTCATTTGGACA 1612761 Query 66032 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 66091 |||||| ||||| || | | | |||||||||||| |||||||| ||||||||||| Sbjct 1612760 CATCAAAGACCAGTCCTGATTAGTTTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAG 1612701 Query 66092 AGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 66140 | | | | | ||| |||| | || || || |||||||| ||| || Sbjct 1612700 ACCAAAGGAAAGATCCCTGGCACGCTGCTCTTCCTTTCCTGTGTTCCTT 1612652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657755271630000