Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq42965 109 5e-19 seq472 109 5e-19 seq436 109 5e-19 seq338 105 7e-18 seq44605 100 3e-16 seq598 98.7 1e-15 seq41602 91.5 1e-13 seq48498 89.7 5e-13 seq580 87.8 2e-12 seq41965 86.0 6e-12 seq377 82.4 8e-11 >seq42965 Length=562198 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606 || |||| |||||||| | || |||||||| || ||||| || || || |||| | Sbjct 301193 AAGCGCAGGACTAAGTGCAGAGTTGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGC 301252 Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666 ||||| || ||||| |||||| |||||| | ||||| || ||||| || ||||| Sbjct 301253 CCATCTTCCAGTTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCC 301312 Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726 ||||| ||| || || | | || | ||||| ||||||||||||| | ||| Sbjct 301313 TTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTG 301372 Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | |||||||| |||| || || ||||| || ||||| Sbjct 301373 ATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 301410 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||| | || | ||| | || ||||| || || ||||| || ||| | Sbjct 301412 CCACCTCGGAGACGGAGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 301471 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | | || || | ||||| |||||||| || ||| |||||| | ||||| || ||||| Sbjct 301472 AGGGGGCGTCCA-TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGG 301530 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| || || | | || | ||||| |||||||||| Sbjct 301531 GATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCAC 301590 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||| |||| || || ||||| || ||||| Sbjct 301591 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 301638 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||| | || | ||| | || ||||| || || ||||| || ||| | Sbjct 301640 CCACCTCGGAGACGGAGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 301699 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | | || || | ||||| |||||||| || ||| |||||| | ||||| || ||||| Sbjct 301700 AGGGGGCGTCCA-TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGG 301758 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| || || | | || | ||||| |||||||||| Sbjct 301759 GATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCAC 301818 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||| |||| || || ||||| || ||||| Sbjct 301819 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 301866 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||| | || | ||| | || ||||| || || ||||| || ||| | Sbjct 301868 CCACCTCGGAGACGGAGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 301927 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | | || || | ||||| |||||||| || ||| |||||| | ||||| || ||||| Sbjct 301928 AGGGGGCGTCCA-TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGG 301986 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| || || | | || | ||||| |||||||||| Sbjct 301987 GATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCAC 302046 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||| |||| || || ||||| || ||||| Sbjct 302047 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 302094 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||| | || | ||| | || ||||| || || ||||| || ||| | Sbjct 302096 CCACCTCGGAGACGGAGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 302155 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | | || || | ||||| |||||||| || ||| |||||| | ||||| || ||||| Sbjct 302156 AGGGGGCGTCCA-TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGG 302214 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| || || | | || | ||||| |||||||||| Sbjct 302215 GATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCAC 302274 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||| |||| || || ||||| || ||||| Sbjct 302275 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 302322 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||| | || | ||| | || ||||| || || ||||| || ||| | Sbjct 302324 CCACCTCGGAGACGGAGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 302383 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | | || || | ||||| |||||||| || ||| |||||| | ||||| || ||||| Sbjct 302384 AGGGGGCGTCCA-TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGG 302442 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| || || | | || | ||||| |||||||||| Sbjct 302443 GATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCAC 302502 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||| |||| || || ||||| || ||||| Sbjct 302503 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 302550 >seq472 Length=1492349 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||| ||||| ||||| ||||| || || || || | | |||||| | |||| Sbjct 1223260 TGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTACGCCCGTCTTCCAACTGT 1223201 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| | ||||| | ||||||||||| ||| || |||| || || |||||| Sbjct 1223200 TTGCCAGCAAAAATCAGTCTTTGCTGATCGGAAGGAATTTCTTCCTTATCCTGGATTTTG 1223141 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 ||||| | ||| | ||| || | || || ||||| | ||| | ||||| || || Sbjct 1223140 GCTTTTACATTTTCTATTGTATCCGACGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTG 1223081 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||||||||| || ||||| Sbjct 1223080 AGGGTTTTTACGAAAATCTGCAT 1223058 >seq436 Length=2687165 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 ||||||||||| |||||||| || || | |||| ||||| ||||| || || Sbjct 806395 GTAGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 806454 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| || | |||||||| ||||| ||||||||||| || ||| || || Sbjct 806455 GCAAAGATGAGCCTCTGCTGATCAGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 806514 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| ||||||||||||| | ||| | ||||||||||||| || Sbjct 806515 ACATTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 806574 Query 139748 TTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 806575 TTCACGAAGATCTGCATA 806592 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || | ||| | ||||||||||| |||||||| || || | |||| Sbjct 806605 CGCAGGACCAGGTGCAGAGTAGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCA 806664 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || || ||| |||| || | ||||| || ||||| ||||||||||| Sbjct 806665 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTA 806724 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||| |||| |||||||| | ||| | Sbjct 806725 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACCTCGAGGGTGATG 806784 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| || | || || || || || ||||| Sbjct 806785 GTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCAT 806819 >seq338 Length=5205875 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| | | ||||| ||||| ||||| || || || || | | ||||| | |||| Sbjct 2398042 TGAAGCATGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTACGCCCATCTTCCAACTGT 2398101 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| | ||||| | ||||||||| ||||| || ||||| || || |||||| Sbjct 2398102 TTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTG 2398161 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 ||||| | ||| | ||| || | || || ||||| | ||| | ||||| || || Sbjct 2398162 GCTTTTACATTTTCTATTGTATCCGACGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTG 2398221 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||||||||| || ||||| Sbjct 2398222 AGGGTTTTTACGAAAATCTGCAT 2398244 >seq44605 Length=175201 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||||||| ||||||||||| ||||| || ||| || | | ||||| | |||| Sbjct 1709 TGAATCGTGGACTCTTTTTGGATGTTGTA----GTCAAAGTACGCCCATCTTCCAACTGT 1764 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 | |||||| | ||||| | ||||||||| ||||| || ||||| || || |||||| Sbjct 1765 TAGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTG 1824 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 ||||| | ||| | ||| || ||||| ||||| | ||| | ||||| || | Sbjct 1825 GCTTTTACATTTTCTATTGTATCCAAAGGCTCAACCTCGAGGGTGATGGTCTTCCCTGGG 1884 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||||| ||| || ||||| Sbjct 1885 AGGGTTTTTATGAAAATCTGCAT 1907 Score = 89.7 bits (98), Expect = 5e-13 Identities = 143/204 (70%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| || ||||| ||||| ||||| || || || || | ||||| | |||| Sbjct 654 TGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTATGCCCATCTTCCAACTGT 713 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| | ||||| | ||||||||||||||| || ||||| || | |||||| Sbjct 714 TTGCCAGCAAAAATCAGTCTTTGCTGATCGGGAGGAATTCCTTCCTTACCCTGGATTTTG 773 Query 139682 TGTTTTAGCTGTTCCACTGTGT-CGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 ||||| | ||| | ||| | | ||| || ||||| | ||| | ||||| || || Sbjct 774 GCTTTTACATTTTCTATTGTATCCAAAGGGTTCAACCTCTAGGGTGATGGTCTTCCCTGT 833 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | |||||||| || || ||||| Sbjct 834 AAGGGTTTTTACAAAAATCTGCAT 857 >seq598 Length=3788045 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| || || || ||||| ||||| || || || || | | ||||| |||||| Sbjct 3751584 TGAAGTGTGGATTCCTTTTGGATGTTGTAGTCAGACAGAGTACACCCATCTTCCAGCTGT 3751525 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| | ||||| | ||||||||| ||||| || || | || || |||||| Sbjct 3751524 TTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCCTTCTTCTCCTGGATTTTG 3751465 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 ||||| | ||| | ||| || | || || ||||| | ||| | ||||| || || Sbjct 3751464 GCTTTTACATTTTCTATTGTATCCGACGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTG 3751405 Query 139742 AACGTTTTTACGAATATTTGCATA 139765 | ||||||||||| || |||||| Sbjct 3751404 AGGGTTTTTACGAAAATCTGCATA 3751381 >seq41602 Length=2297222 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/203 (71%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||| ||||| ||||| |||| || || | | || || | ||||| | ||| Sbjct 311945 TGAAGCGTGGACTCCTTTTGGATGTCGTAGTCAG--AGTATG-TCCA-TCTTCCAACTGC 311890 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| | ||||| | ||||||||| ||||| || ||||| || || |||||| Sbjct 311889 TTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTG 311830 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 ||||| | ||| | ||| || | || || ||||| | ||| | | ||| || || Sbjct 311829 GCTTTTACATTTTCTATTGTATCCGACGGTTCAACCTCGAGGGTGATGGCCTTCCCTGTG 311770 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||||||||| || ||||| Sbjct 311769 AGGGTTTTTACGAAAATCTGCAT 311747 >seq48498 Length=215879 Score = 89.7 bits (98), Expect = 5e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| | | || || ||||| ||||| || || || | | | ||||| | |||| Sbjct 7164 TGAAGCATGGATTCCTTTTGGATGTTGTAGTCAGACAAAGAACGCCCATCTTCCAACTGT 7223 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| | ||||| | | || |||| ||||| || ||||| || || |||||| Sbjct 7224 TTGCCAGCAAAAATCAGTCTTCGCCGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTG 7283 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 ||||| | ||| | ||| || | || || ||||| | ||| | ||||| || || Sbjct 7284 GCTTTTACATTTTCTATTGTATCCGACGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTG 7343 Query 139742 AACGTTTTTACGAATATTTGCA 139763 | ||||||||||| ||||||| Sbjct 7344 AGGGTTTTTACGAAAATTTGCA 7365 >seq580 Length=5418713 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/203 (70%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||| ||||| ||||| ||||| || || | || | | |||||| | |||| Sbjct 3045099 TGAAGCGTGGACTCCTTTTGGATGTTGTAGTC----AAAGTACGCCCGTCTTCCAACTGT 3045044 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| | | ||| | |||||||||||||| || ||||| || | || ||| Sbjct 3045043 TTGCCAGCAAAAAACAGTC--TGCTGATCGGGAGGAATTCCTTCCTTACCCTGGACTTTG 3044986 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 ||||| | ||| ||| || | || || ||||| | ||| | ||||| || || Sbjct 3044985 GCTTTTACATTTTCTGTTGTATCCGATGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTG 3044926 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||||||||| || ||||| Sbjct 3044925 AGGGTTTTTACGAAAATCTGCAT 3044903 >seq41965 Length=2584669 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| | | ||||| ||||| ||||| || || | || | | | |||||| ||| Sbjct 726282 GTGAAGC-TGGACTCCTTTTGGATGTTGTAGTCACACAAAGCACACCCGTCTTC---CTG 726337 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || |||||| | | ||| | |||||||| ||||| || ||||| || | |||||| Sbjct 726338 CTTGCCAGCAAAAACCAGTC--TGCTGATCAGGAGGAATTCCTTCCTTACCCTGGATTTT 726395 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 ||||| | ||| ||||| || | || || ||||| | ||| | ||||| || || Sbjct 726396 GGCTTTTACATTTTCTACTGTATCCGATGGTTCAACCTCGAGGGTGATGGTCTTCCCTGT 726455 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | ||||||||||| || ||||| Sbjct 726456 GAGGGTTTTTACGAAAATCTGCAT 726479 >seq377 Length=8962407 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||| ||||| ||||| | | || || || || | | |||||| | || Sbjct 4754182 TGAAGCGTGGACTCCTTTTGGGTATCGTAGTCAGACAAAGTACGCCCGTCTTCCAAAGGT 4754123 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| | ||||| | ||||||||| |||| || ||||| || || |||||| Sbjct 4754122 TTGCCAGCAAAAATCAGTCTTTGCTGATCAAGAGGAATTCCTTCCTTATCCTGGATTTTG 4754063 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 ||||| || ||| ||| || | || ||||||| ||| | ||||| || || Sbjct 4754062 GCTTTTACCTTTTCTGTTGTATCCAACCGTTCAACCTCAAGGGTGATGGTCTTCCCTGTG 4754003 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||||||||| || ||||| Sbjct 4754002 AGGGTTTTTACGAAAATCTGCAT 4753980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495749309400000