Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq53 747 0.0 seq48864 307 2e-78 seq75 138 2e-27 seq79 122 1e-22 seq199 113 6e-20 seq805 104 3e-17 seq44217 84.2 3e-11 >seq53 Length=2810707 Score = 747 bits (828), Expect = 0.0 Identities = 1451/2124 (68%), Gaps = 31/2124 (1%) Strand=Plus/Minus Query 78738 TGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAA 78797 ||| ||| | || | || ||| ||||| || || || | | | |||| || ||||| Sbjct 1303543 TGCTGGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAATTCTGCTTCCAGCCATAGAA 1303484 Query 78798 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 78857 |||||||| || |||||| ||| | || || || ||||||||||||| ||| ||||| Sbjct 1303483 GTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATATTCAAAGACTGACT 1303424 Query 78858 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTC 78917 |||||| ||||| | | || | || ||||| || | | || || || | ||||| Sbjct 1303423 TTGATCAATGAAAGTATCTCTCTTGGCTGCCATCTTGAGAACAGTTTTCTGGGAGATTTC 1303364 Query 78918 CCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG-TAT--TCTGAATGGA 78974 ||| ||||| ||||||| | ||| | || || | || | || ||| |||| || || Sbjct 1303363 CCACATAGTCTTATAAAGTTCCTTCAGGTCATCAGTAATTTCTGGTATGCTCTGGATAGA 1303304 Query 78975 TCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAA 79034 ||| ||| |||||| ||| || |||||||||||||| || | ||| || | Sbjct 1303303 GCCATTGCATGCAATAATCTGATTTTTCATCTCTTCATTCCACAAGCCCCACTCAGTAAG 1303244 Query 79035 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 79094 | || | || | || ||||| || | ||||||||||| ||||| ||||| ||||||| Sbjct 1303243 ATCTTTCAGTAAGTGAGGATTTACAATCTGAAATTCTCCTGACAAGACTCTGTGAGTGTA 1303184 Query 79095 AATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGC 79154 || || |||||||| ||||| | || |||||||| ||||| || |||||||||| || Sbjct 1303183 GATGTTGCTGGTATAAGGTTCAATGGACTCATTATTCCCCAAGATCTGAGCAGTTGCAGC 1303124 Query 79155 CGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTT 79214 || | ||| || || | | |||||| ||||| | ||| || | || || || || Sbjct 1303123 AGTAGTCATTGGGGCAATAAGTAAACTGTTTCTTACACCATACTTTGCAATCTTGTCCTT 1303064 Query 79215 TAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAAT 79274 ||| || ||| ||||| || || | || ||||||||| | |||||| || ||||| Sbjct 1303063 GAGAAGTTTCCAGTCCCACAGGTCTGTGGGAGTAACATTCCACACATCATACTGAAGAAT 1303004 Query 79275 ACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTC 79334 | || || | || || || ||||| || || || | || || ||| | || Sbjct 1303003 TTCTTTGCTTACTGGAGAGCCCTCATAGGTTTCCTATGGACCATACTCTTTGGCCAGGTC 1302944 Query 79335 ACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTG 79394 ||| || || || || ||||| |||||||| |||| || || | |||||| || || Sbjct 1302943 ACAGCTGGCTTCCAAGGCTCCATAATAAATAGTTTGAAAGATTTGCTTATTCAGTAACTG 1302884 Query 79395 TGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 79454 | ||| | || ||||||||||| | | | ||||| || || || | ||||||| Sbjct 1302883 GACCTCTGGACTTTCAAATGGATATCTCATCAAGATAAAAGCATCAGCCAGAACTTGAAC 1302824 Query 79455 ACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATA 79514 ||||| || || || ||| | ||||| || | | || ||||||||||| || || Sbjct 1302823 CCCAATTCCAATGGGGTGATGGCGTTTATTTGATACGTATGCCTCTGGAATAGGGTAGTA 1302764 Query 79515 ATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTT---TGACCACATCCTTTAG 79571 || ||| ||||||||||| | || | || || |||| |||| || || || Sbjct 1302763 GTTTCTATTAATAATTTTATTCAAGTTTCGAACAATGACTTCAGTGACTTCAGCC---AG 1302707 Query 79572 TTTGAGAAAATCAAATC---GTCCATCTATTACAAACATGTTCAACGCGACAGATGCCAG 79628 || ||| || | || | | | ||| |||| |||| || | || |||| Sbjct 1302706 CTTCTTAAAGTCGTACGTGTGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCCAA 1302647 Query 79629 ATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTA 79686 |||||||| || ||||| | | || | ||| | || |||||| ||||| ||||| Sbjct 1302646 GTTACAAACTGCAACCTCCTCTTTGCTG--GTATACTCTACTATTTCTGTGCACAGGTTG 1302589 Query 79687 CTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAA 79746 || || || || | ||| | || || || || ||||| | ||||| | || || || Sbjct 1302588 CTGCATTTGATTGCTCCCAGGTTCTGCTGGTTGCTCTTATGATTACAGGAATTTTTGTAG 1302529 Query 79747 AGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCG 79805 || ||| | || || |||| || ||||||| || ||||| || | ||| | | || | Sbjct 1302528 AGCATGTAGGG-GTGTCAGTCTCTGTCTGAGACTCAATAATAGCATACCAAAGCTGCT-G 1302471 Query 79806 AGCCTTTATTATAGACTTGT--ATCT--CTTTTCTCTTTCGTATTGTGTATATAATCGTT 79861 ||| || | | |||| || | | | || | || || | | ||||| | Sbjct 1302470 AGCTTTCACAACT---TTGTGAATGTGACCCTGCT-TCTCATACTTTTCATATAGCTTCT 1302415 Query 79862 CGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACC 79921 | || || ||||||||||| || || | |||||||| || | ||||||||||| |||| Sbjct 1302414 CAAATTCTTCTCCCCAAACTTCATCCAGGCCAGGACACTCATTTGGACACATCAAAGACC 1302355 Query 79922 ACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 79981 | || || | | || | |||||| |||||||| | ||||||||| || | || | Sbjct 1302354 AGTCCTGATTAGTTTCCACCCATTTCATGAAGAGATCTGAAATCCAAAGGGCAAAGAAAA 1302295 Query 79982 GATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 80041 |||| || | || || || |||||||| ||||| || | |||||| ||| | | | Sbjct 1302294 GATCCCTCGCATGCTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGAAACTCAAAGA 1302235 Query 80042 TATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCT 80101 | || ||||| | |||| || ||| || || | | || | || |||||||| || | Sbjct 1302234 TGTCTAAATGCTAAGGTTTCAGGTAAATAGCAAATGCCCCAAGACGCTTGTTTCCACCTT 1302175 Query 80102 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 80161 |||||| ||||| ||| || ||| | || ||||||| |||||| | || |||||||| Sbjct 1302174 GATCTACGTATCGAGCTGTATTACTGTATACTCTCAGCATTGGTACAAGGCCATTGGAAT 1302115 Query 80162 TACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTA 80221 | ||||| ||||| | | ||||| ||| | || |||||| ||| | | | ||| | Sbjct 1302114 TGCCATTAGTCCCAGCAAGGTAGCTGCCAGTAGCCCGAATACAACTCACAGCAACACCAA 1302055 Query 80222 TTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 80281 ||||||| || ||||| || || || || | |||| |||||||| || || || | Sbjct 1302054 TTCCCCCAGCAGACTTAGAAATCAAAGCACACTGCTTTAGAGTATCATAAATCCCTTCAA 1301995 Query 80282 TGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 80341 |||| ||||| ||||||| || || ||| || |||| | || | ||| | || || | Sbjct 1301994 TGCTGTCATCTTTCATGTTCAGAAGGAAATAGGTAGAAAGTTCTGGGCGATTGGTGCCAG 1301935 Query 80342 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCT 80401 |||| || | || ||||| || || || ||||| || ||||| || || || || || | Sbjct 1301934 CATTGAAGAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGAAAGAAGGTTATATGTTT 1301875 Query 80402 CAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCT 80461 |||| || | || || || || ||||| || || | || | ||| |||||||| | Sbjct 1301874 CAATTGCAGCATCAATGTCTTCTTTGTGAATCCCCACAGATACCCTCATCAACATGTGTT 1301815 Query 80462 GAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAA 80521 | ||||| ||| | | || | | || |||||||| || || | ||||| | |||| Sbjct 1301814 GCGGTCTGTCAGCCACTTTCCCACTAATCTTCAACAAATAGGACTGCTCCAATGCCTTAA 1301755 Query 80522 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCT 80581 | |||||||| ||||| ||||| ||||| || || || || | || || || ||| | Sbjct 1301754 AGCCAAAATAATTGTAAGAAAAATCTCGATCATAGATGATGGCAGAATTTAGGCAATCTT 1301695 Query 80582 TATATTTGTTAACTACATCCA-TGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATT 80639 ||| ||| | |||| || || |||| | | || | ||| ||||| ||||| Sbjct 1301694 TATTGGCCAAAACAATGTCCAGTGTTG--ACTTGGCCACCATGGAAGAGTGTTTGCCATT 1301637 Query 80640 TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTC 80699 | ||||| | |||||| | | || |||||||| |||||||| | ||| |||||||| Sbjct 1301636 ATGTGGATTTATGTAGTTGTAAAGGTCTTCCATCACATCACTAAACATTTTCTTTGTTTC 1301577 Query 80700 CTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGT 80759 ||||| | || ||||| || || || || || | ||||||||| || || || | || Sbjct 1301576 TTTGTGCAAGTTAGATACAGCAATCCTTGCTGCCAGAATGGCATAGTCAGGGTGCTTAGT 1301517 Query 80760 AGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATT 80819 ||| | || || ||| |||| || |||| ||| || | ||| ||| | || || ||| | Sbjct 1301516 AGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGTTCAACCATGGTGACCCCACT 1301457 Query 80820 ATATATTCCTTGGATAACCTTCAT 80843 ||| | |||||||| || ||||| Sbjct 1301456 ATACAAGCCTTGGATTACTTTCAT 1301433 >seq48864 Length=438413 Score = 307 bits (340), Expect = 2e-78 Identities = 552/800 (69%), Gaps = 15/800 (2%) Strand=Plus/Plus Query 49616 AAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTTT 49672 |||||||| |||||| | |||| ||| || | || |||||||||||||| | | Sbjct 419683 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 419742 Query 49673 GGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCA 49732 | || ||||| || | || || || || ||||| |||||||||| | | ||||| |||| Sbjct 419743 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 419802 Query 49733 TGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATC 49792 | || ||||| ||||| || | ||| | ||||||||| ||| || | || Sbjct 419803 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 419862 Query 49793 TATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 49852 ||| || ||||| || || || ||||||| | || ||||| | || || || | Sbjct 419863 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 419921 Query 49853 CTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGAT-ACCGCATCTGTTATAAT-AGA 49910 | || | |||| | || || || || ||||| | | || |||| | ||||| | Sbjct 419922 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCAT---TGATAATGATT 419978 Query 49911 TCTAACGGTTTCTTCACT--CGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 49968 ||| | | ||| | || ||| || | | |||| ||||||| | || | | Sbjct 419979 TCTTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACA 420038 Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028 | ||||| | || ||| ||||| ||||| ||||| |||||||| ||||| || ||||| Sbjct 420039 TTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATC 420098 Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCT 50088 || | || | || ||||| ||||| | ||||| || |||| |||||||||||||||| Sbjct 420099 AGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGCCAGTAAAGAAGATTCCTTCT 420158 Query 50089 ACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC----TGTCATGTATCCACTT 50144 ||||| ||||| || ||| | |||||||| | || |||| ||||| Sbjct 420159 ACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTTGTCCCCAATCCAACG 420218 Query 50145 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 50204 |||||||| |||| ||| || ||||||||||| ||||| |||||| | |||||| | Sbjct 420219 CAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAA 420278 Query 50205 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 50264 | |||| || |||||||| ||||| || || | | |||||||||||| ||| | Sbjct 420279 TTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGG 420338 Query 50265 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 50324 |||||||| ||||| || || || || || ||||| | || || ||||| | ||||| Sbjct 420339 TATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTC 420398 Query 50325 TGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 50384 | | |||||| || | | |||||||| || || || |||| ||| |||| || || Sbjct 420399 TTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGC 420458 Query 50385 CAATACATGTTTTATAAAAT 50404 || ||||| ||| |||| Sbjct 420459 CAGAACATGGGATATGAAAT 420478 Score = 302 bits (334), Expect = 6e-77 Identities = 551/800 (69%), Gaps = 15/800 (2%) Strand=Plus/Plus Query 49616 AAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTTT 49672 |||||||| |||||| | |||| ||| || | || |||||||||||||| | | Sbjct 414760 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 414819 Query 49673 GGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCA 49732 | || ||||| || | || || || || ||||| |||||||||| | | ||||| |||| Sbjct 414820 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 414879 Query 49733 TGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATC 49792 | || ||||| ||||| || | ||| | ||||||||| ||| || | || Sbjct 414880 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 414939 Query 49793 TATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 49852 ||| || ||||| || || || ||||||| | || ||||| | || || || | Sbjct 414940 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 414998 Query 49853 CTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGAT-ACCGCATCTGTTATAAT-AGA 49910 | || | |||| | || || || || ||||| | | || |||| | ||||| | Sbjct 414999 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCAT---TGATAATGATT 415055 Query 49911 TCTAACGGTTTCTTCACT--CGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 49968 ||| | | ||| | || ||| || | | |||| ||||||| | || | | Sbjct 415056 TCTTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACA 415115 Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028 | ||||| | || ||| ||||| ||||| ||||| |||||||| ||||| || ||||| Sbjct 415116 TTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATC 415175 Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCT 50088 || | || | || ||||| ||||| | ||||| || ||| |||||||||||||||| Sbjct 415176 AGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGACAGTAAAGAAGATTCCTTCT 415235 Query 50089 ACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC----TGTCATGTATCCACTT 50144 ||||| ||||| || ||| | |||||||| | || |||| ||||| Sbjct 415236 ACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTTGTCCCCAATCCAACG 415295 Query 50145 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 50204 |||||||| |||| ||| || ||||||||||| ||||| |||||| | |||||| | Sbjct 415296 CAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAA 415355 Query 50205 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 50264 | |||| || |||||||| ||||| || || | | |||||||||||| ||| | Sbjct 415356 TTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGG 415415 Query 50265 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 50324 |||||||| ||||| || || || || || ||||| | || || ||||| | ||||| Sbjct 415416 TATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTC 415475 Query 50325 TGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 50384 | | |||||| || | | |||||||| || || || |||| ||| |||| || || Sbjct 415476 TTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGC 415535 Query 50385 CAATACATGTTTTATAAAAT 50404 || ||||| ||| |||| Sbjct 415536 CAGAACATGGGATATGAAAT 415555 >seq75 Length=11204613 Score = 138 bits (152), Expect = 2e-27 Identities = 106/126 (84%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| ||||| ||||| || ||||| ||||| |||||||| || || || || | Sbjct 8448220 CCTCATCTCTGCTAATCAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCT 8448279 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| ||||| || ||||| || |||||||||||||||||||||||||| ||||||| Sbjct 8448280 TGAGCCAGAATATTGATGCAAACGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGG 8448339 Query 50102 CAACAA 50107 | |||| Sbjct 8448340 CTACAA 8448345 Score = 95.1 bits (104), Expect = 2e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||||| ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 8452278 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 8452337 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339 || || || || |||||||| | || || || ||||| |||||| | |||||| || Sbjct 8452338 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTTATCTGAACTTCTTGGCTAAATCGCTC 8452397 >seq79 Length=8883450 Score = 122 bits (134), Expect = 1e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 707237 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 707296 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 || |||||||| ||||| || ||||||||||| || || ||||| || || | | |||| Sbjct 707297 GACTCATTATTCCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 707356 Query 79180 CTATTTCTAAGACCGTA 79196 || ||||| | ||| || Sbjct 707357 CTGTTTCTTACACCATA 707373 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| || ||||| |||||||| || |||||| ||| | || || || |||||||| | Sbjct 703085 TCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATGT 703144 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 ||| ||| ||||||||||| ||||| || || || || || ||||| || | | || | Sbjct 703145 TCAAAGACTGACTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTTT 703204 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 | || | |||||||| | ||| ||||||| | |||| | || || |||| Sbjct 703205 TCTGGGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 703255 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 ||||||||||| |||||||| ||||||||||| || | || ||||| |||| | ||| Sbjct 735387 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCCCTGGCACGCTGC 735446 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 || || |||||||| ||||| || | |||||| ||| | | || || ||||||| ||| Sbjct 735447 TCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGAAACTCAAAGATGTCTAAATGCCAAGGT 735506 Query 80059 TCCAAGTATATGGC 80072 |||| ||| || || Sbjct 735507 TCCAGGTAAATAGC 735520 >seq199 Length=4383281 Score = 113 bits (124), Expect = 6e-20 Identities = 103/130 (79%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| || || ||||| |||||||| || ||||| ||||| || || | ||| | Sbjct 4204743 CCTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCT 4204684 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| ||||| | ||||| || || || ||||| ||||||||||| || ||||||| Sbjct 4204683 TCAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 4204624 Query 50102 CAACAAGTCT 50111 | |||| ||| Sbjct 4204623 CCACAACTCT 4204614 >seq805 Length=2268304 Score = 104 bits (114), Expect = 3e-17 Identities = 476/741 (64%), Gaps = 42/741 (6%) Strand=Plus/Minus Query 79299 GTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTA 79358 ||| || ||||| || || | || || ||| | ||||| || || || | ||||| || Sbjct 1613370 GTAGGTGTCATACGGGCCATACTCTTTGGCCAGGTCACAGCTGGCTTCCAGAGCTCCATA 1613311 Query 79359 ATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATA 79418 |||| ||||||| || || | |||||| || | || ||| | || ||||| |||| Sbjct 1613310 ATAAGTGGTTTCAAAGATTTGCTTATTCAGTAACAGGGCCTCTGGACTCTCAAAATGATA 1613251 Query 79419 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 79478 | | | ||||| || || || | |||||| || || || | || Sbjct 1613250 TCTCATCAAGATAAAAGCATCGGCCAG---------ACCAATTCCAATGGGGCGATAATG 1613200 Query 79479 CTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 79538 ||||| || | || ||||||||||| || || | | ||| | ||||||||| | Sbjct 1613199 TTTATTTGATAAGCATGCCTCTGGAATAGGGTAGTAGCTTACATCAACAATTTTATTCAA 1613140 Query 79539 ATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATC-GTCCATCTA 79597 || | ||| || ||||| || | ||||| ||| ||| || || | ||| Sbjct 1613139 GTTTCGGACAATGACTTTAGTGACTTGGGCCAGTTTCTTAAAGTCATATGTGTGC-TCTG 1613081 Query 79598 TT---ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 79654 | ||| ||| |||| || | || ||||| |||||||| || | || | || Sbjct 1613080 ATGTGACATACACATTCAGGGCCATGGAAGCCAGGTTACAAACTGCAAGTTCTCT-GCTG 1613022 Query 79655 CCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTT 79714 | ||| | || |||||| ||||| ||||| ||||| | || |||| | || || | Sbjct 1613021 --GTATACTCTACTATTTCTGTGCACAGGTTGCTACATTCGATCATTCCCAGGTTCTGCT 1612964 Query 79715 GATTACTCTT------TTTG-TTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTT 79767 | || ||||| |||| |||| | ||| || || | | | || |||||| | Sbjct 1612963 GGTTGCTCTTCCTTTTTTTGATTACT-GAATCTTTGAGGAGCAAGTAGGGGGTACCAATC 1612905 Query 79768 TCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTA-----TTATAGAC 79821 ||| ||||||| || | ||| || | ||| | | || |||| | || | || Sbjct 1612904 TCAGTCTGAGACTCAACAATAGCATACCAAAGCTGCT-GAGCTTCCCCAACTTTGCAAAC 1612846 Query 79822 TTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAAC- 79880 || || || ||| | | | | ||||| | || || || |||| |||||| Sbjct 1612845 ATGACCCTGCTT-CTCATACTTCTC----ATATAG-CTCTCAAATTCTTCTCTCCAAACT 1612792 Query 79881 --ATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT 79938 || | | | ||||||| || | ||||||||||| ||||| || || | | Sbjct 1612791 GGAT-GACCAGGTCAGGACACTCATTTGGACACATCAAAGACCAGTCCTGATTAGTTTCC 1612733 Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 ||||||||||| |||||||| |||||||||||| | | | ||||| |||| | ||| Sbjct 1612732 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGACCAAAGGAAAGATCCCTGGCACGCTGC 1612673 Query 79999 TCCTCGTTTCCTGTATTCTTT 80019 || || |||||||| ||| || Sbjct 1612672 TCTTCCTTTCCTGTGTTCCTT 1612652 Score = 102 bits (112), Expect = 1e-16 Identities = 242/360 (67%), Gaps = 13/360 (4%) Strand=Plus/Minus Query 80110 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 80169 |||| ||| || | ||| | ||||||| ||| || | || |||| || | ||||| Sbjct 1611100 TATCAAGCTGTACTGTTACATACTCTCAGCATCGGTACAAGGCCATCGGCATTGCCATTA 1611041 Query 80170 GTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 80229 ||||| | | |||||| ||||| || | |||| ||| | | | ||| | | |||| Sbjct 1611040 GTCCCAGCAACATAGCTGCCACTAGCTCAAATACAACTCACAGCAACACCAACTTCCCCA 1610981 Query 80230 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCA 80289 || |||||| || ||||| ||| | || | || ||||| ||||| | |||| || Sbjct 1610980 GCAGATTTAGAAATCAATGCACATTGCTTGAGAGTGTCATAAATGCCTTTGGTGCTGTCG 1610921 Query 80290 TCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA-CGACTAGTTCCCGCATTAAA 80348 || ||||| | || || ||||||||||| | || |||| | | | || || ||||| | Sbjct 1610920 TCTTTCATGCTCAGAAGTAAACAGCTAGAAAGTT-GTGAGCCATTGGTGCCAGCATTGA- 1610863 Query 80349 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGC 80408 | |||| || || || ||||| || ||||| || ||||| | ||||| || Sbjct 1610862 ----GAGTGAGAGGCATGAGTGAACCACTTCTCAGA---GAGGTTGTATATTTCAATTGC 1610810 Query 80409 TGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCT 80468 | || || || || |||| ||| | | || | ||| |||||||| || ||||| Sbjct 1610809 AGCATCAATGTCTTCTTTGTGAA--CCT-CAGATACCCTCATCAACATGTGTTGCGGTCT 1610753 >seq44217 Length=341162 Score = 84.2 bits (92), Expect = 3e-11 Identities = 143/207 (69%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 47751 TTGTACTTCCTCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 47810 ||| ||||| || | |||||| ||| | || |||| | | || ||||| || |||| || Sbjct 123247 TTGAACTTCTTCTATTTCTGGGTAAAAAATTCGTTCACAAATGAGCTGTGCAATTCGGTC 123188 Query 47811 TCCCGTATTTACATTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCC 47870 || | || || | ||| | ||| ||| ||||| || | || || | ||||| Sbjct 123187 ACCTTTTTTAACTTCAAACTTTTCTTTGCCAAAATTAAATAGTACAACACCAACATTTCC 123128 Query 47871 CCTATAATCTTCGTCTATTACACCACCTCCTATAT---CAATGCCTTTTAGTGACAGTCC 47927 ||||||||||| ||||| |||||| |||||| || | | | |||| | || || Sbjct 123127 TCTATAATCTTCATCTATGACACCAGCTCCTACATCTACGAAGTGTTTTGCAGCCAAGCC 123068 Query 47928 AGACCTAGGAGCTATTCTACCATAGCA 47954 ||| | ||||||| ||| ||||| || Sbjct 123067 AGAACATGGAGCTACTCTTCCATAACA 123041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717813148230000