Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq53 711 0.0 seq48864 297 3e-75 seq75 132 6e-26 seq79 129 8e-25 seq199 118 1e-21 seq805 111 2e-19 >seq53 Length=2810707 Score = 711 bits (788), Expect = 0.0 Identities = 1458/2157 (68%), Gaps = 27/2157 (1%) Strand=Plus/Minus Query 70786 TTTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTAC 70845 |||||||| | | |||||| | || ||| | ||| | | | || | || ||| ||| Sbjct 1303578 TTTTCCTTATTTAGAGTAAACAGGATTGGATTAGCTGCTGGTCTTGTCCTTAAATAATAC 1303519 Query 70846 ATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAG 70905 || || || || | | | |||| || || || |||||||| || |||||| |||| Sbjct 1303518 ATCCCAGTCTTCAAATTCTGCTTCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAG 1303459 Query 70906 CTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCT 70965 |||| || || || || ||||||| |||||||||||||| ||||| | | || | Sbjct 1303458 TTAGGTTCAGCAATATGGATATTCAAAGACTGACTTTGATCAATGAAAGTATCTCTCTTG 1303399 Query 70966 GCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTA 71025 || ||||| || | | || || || | |||||||| ||||| ||||||| | ||| Sbjct 1303398 GCTGCCATCTTGAGAACAGTTTTCTGGGAGATTTCCCACATAGTCTTATAAAGTTCCTTC 1303339 Query 71026 ATATCTTCTGGAAGGTTTG-TAT--TCTGAATGGATCCACCATCTGCAATAATCCTATTT 71082 | || || | || | || ||| |||| || || ||| |||||||||| |||| Sbjct 1303338 AGGTCATCAGTAATTTCTGGTATGCTCTGGATAGAGCCATTGCATGCAATAATCTGATTT 1303279 Query 71083 TTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACT 71142 || |||||||||||||| || | ||| || | | || | || | |||||||| || Sbjct 1303278 TTCATCTCTTCATTCCACAAGCCCCACTCAGTAAGATCTTTCAGTAAGTGAGGATTTACA 1303219 Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 | ||||||||||| ||||| ||||| ||||||| || || |||||||| ||||| | Sbjct 1303218 ATCTGAAATTCTCCTGACAAGACTCTGTGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 1303159 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 ||||||||||| ||||| || |||||||||| ||||| | ||| || || | | || | Sbjct 1303158 GACTCATTATTCCCCAAGATCTGAGCAGTTGCAGCAGTAGTCATTGGGGCAATAAGTAAA 1303099 Query 71263 CTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCC 71322 || ||||| | ||||| | || || || || ||| || ||| | ||| || || Sbjct 1303098 CTGTTTCTTACACCATACTTTGCAATCTTGTCCTTGAGAAGTTTCCAGTCCCACAGGTCT 1303039 Query 71323 GATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCA 71382 | || ||| || | || || | || || || Sbjct 1303038 GTGGGAGTAACATTCCACACATCATACTGAAGAATTTCTTTGCTTACTGGAGAGCCCTCA 1302979 Query 71383 TATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAA 71442 || || || ||||| || | | || ||| || ||||| || || || || ||||||||| Sbjct 1302978 TAGGTTTCCTATGGACCATACTCTTTGGCCAGGTCACAGCTGGCTTCCAAGGCTCCATAA 1302919 Query 71443 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 71502 ||||| |||| || || | |||||| || || | || || || ||||||||||| Sbjct 1302918 TAAATAGTTTGAAAGATTTGCTTATTCAGTAACTGGACCTCTGGACTTTCAAATGGATAT 1302859 Query 71503 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTC 71562 | | | ||||| || || || | ||||||| ||||| || || || || | Sbjct 1302858 CTCATCAAGATAAAAGCATCAGCCAGAACTTGAACCCCAATTCCAATGGGGTGATGGCGT 1302799 Query 71563 TTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 71622 ||||| || | | || ||||||||||| || || || ||| ||||||||||| | Sbjct 1302798 TTATTTGATACGTATGCCTCTGGAATAGGGTAGTAGTTTCTATTAATAATTTTATTCAAG 1302739 Query 71623 TTTCTGACTATTACTT---TGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCT 71679 |||| || || |||| |||| || || || || ||| || | | ||| Sbjct 1302738 TTTCGAACAATGACTTCAGTGACTTCAGCC---AGCTTCTTAAAGTCGTACGTGTGTTCT 1302682 Query 71680 ATT---ACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT--TAG 71734 | ||| ||| |||| ||| | || |||| |||||||| || ||||| | | | Sbjct 1302681 GATGTGACATACATATTCAGGGCCAGGGAAGCCAAGTTACAAACTGCAACCTCCTCTTTG 1302622 Query 71735 CATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 71794 | || ||| | || ||||| ||||| || || || || ||||| | ||| | || | Sbjct 1302621 CT--GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATTGCTCCCAGGTTCT 1302564 Query 71795 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAA 71854 | || || ||||| | ||||| | || || || || || | || || |||| || Sbjct 1302563 GCTGGTTGCTCTTATGATTACAGGAATTTTTGTAGAGCATGTAGGG-GTGTCAGTCTCTG 1302505 Query 71855 TCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATATTCTTGTATCT- 71912 ||||||| || ||||| || | ||| | | || |||| || | | || | | || | Sbjct 1302504 TCTGAGACTCAATAATAGCATACCAAAGCTGCT-GAGCTTTCACAACTTTGT-GAATGTG 1302447 Query 71913 -CTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTA 71971 | | || | || || | | ||||| || || || ||||||||| | | || | Sbjct 1302446 ACCCTGCT-TCTCATACTTTTCATATAGCTTCTCAAATTCTTCTCCCCAAACTTCATCCA 1302388 Query 71972 ATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCA 72031 |||||||| ||||| ||||||||||| ||||| || || | | || | ||||| Sbjct 1302387 GGCCAGGACACTCATTTGGACACATCAAAGACCAGTCCTGATTAGTTTCCACCCATTTCA 1302328 Query 72032 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTC 72091 | |||||||| | ||||||||| || | || ||||| || | || || || |||| Sbjct 1302327 TGAAGAGATCTGAAATCCAAAGGGCAAAGAAAAGATCCCTCGCATGCTGTTCTTCCTTTC 1302268 Query 72092 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 72151 |||| ||||| || | |||||| ||| | | || || ||||| | |||| || ||| | Sbjct 1302267 CTGTGTTCTTCTTTAAATCGAGAAACTCAAAGATGTCTAAATGCTAAGGTTTCAGGTAAA 1302208 Query 72152 TGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 72211 | || | | || | || |||||||| || ||||||| ||||| ||| || ||| | | Sbjct 1302207 TAGCAAATGCCCCAAGACGCTTGTTTCCACCTTGATCTACGTATCGAGCTGTATTACTGT 1302148 Query 72212 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 72271 | ||||||| |||||| | || |||||||| ||||| ||||| | | ||||| | Sbjct 1302147 ATACTCTCAGCATTGGTACAAGGCCATTGGAATTGCCATTAGTCCCAGCAAGGTAGCTGC 1302088 Query 72272 CACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 72331 || | || |||||| || | | | ||| |||||||| || ||||| || || | Sbjct 1302087 CAGTAGCCCGAATACAACTCACAGCAACACCAATTCCCCCAGCAGACTTAGAAATCAAAG 1302028 Query 72332 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 72391 | || | |||| |||||||| || || || || || ||||| ||||||| || || | Sbjct 1302027 CACACTGCTTTAGAGTATCATAAATCCCTTCAATGCTGTCATCTTTCATGTTCAGAAGGA 1301968 Query 72392 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 72451 || || |||| | || | ||| | || || ||||| || | || ||||| || || | Sbjct 1301967 AATAGGTAGAAAGTTCTGGGCGATTGGTGCCAGCATTGAAGAGAGTGGGAGAGGCATGAG 1301908 Query 72452 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGAT 72511 | ||||| || ||||| || || || || || ||||| || | || || || || | Sbjct 1301907 TGAACCACTTCTCAGAAAGAAGGTTATATGTTTCAATTGCAGCATCAATGTCTTCTTTGT 1301848 Query 72512 GTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTA 72571 | || || || | || | ||| ||||| || || ||||| ||| | | || | | | Sbjct 1301847 GAATCCCCACAGATACCCTCATCAACATGTGTTGCGGTCTGTCAGCCACTTTCCCACTAA 1301788 Query 72572 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 72631 | |||||||| ||||| | ||||| | ||||| |||||||| ||||| ||||| |||| Sbjct 1301787 TCTTCAACAAATAGGACTGCTCCAATGCCTTAAAGCCAAAATAATTGTAAGAAAAATCTC 1301728 Query 72632 GTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCA-TGGTG 72690 | || || || || | ||||| || ||| |||| ||| || |||| || || Sbjct 1301727 GATCATAGATGATGGCAGAATTTAGGCAATCTTTATTGGCCAAAACAATGTCCAGTGTTG 1301668 Query 72691 ATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 72749 |||| | | || | ||| ||||| ||||| | ||||| | |||||| | | || Sbjct 1301667 --ACTTGGCCACCATGGAAGAGTGTTTGCCATTATGTGGATTTATGTAGTTGTAAAGGTC 1301610 Query 72750 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCT 72809 |||||||| |||||||| | ||| |||||||| ||||| | || ||||| || || || Sbjct 1301609 TTCCATCACATCACTAAACATTTTCTTTGTTTCTTTGTGCAAGTTAGATACAGCAATCCT 1301550 Query 72810 GGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGC 72869 || || ||||||||||| || || || | ||||| | || || ||| |||| || || Sbjct 1301549 TGCTGCCAGAATGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGC 1301490 Query 72870 CAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926 || ||| || | ||| ||| | || || ||| |||| | |||||||| || ||||| Sbjct 1301489 CAAAGTATCTAGTTCAACCATGGTGACCCCACTATACAAGCCTTGGATTACTTTCAT 1301433 >seq48864 Length=438413 Score = 297 bits (328), Expect = 3e-75 Identities = 551/802 (69%), Gaps = 15/802 (2%) Strand=Plus/Plus Query 41721 AAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTTTT 41777 |||||||| ||||||| | |||| ||| || | || |||||||||||||| | | Sbjct 419683 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 419742 Query 41778 GGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTCCA 41837 | || ||||| || | || || || || |||||||||||||||| | | ||||| |||| Sbjct 419743 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 419802 Query 41838 TGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATC 41897 | || ||||| ||||| || | ||| | ||||||||| ||| || | || Sbjct 419803 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 419862 Query 41898 TATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 41957 ||| || | || || || || ||||||| | || ||||| | || || || | Sbjct 419863 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 419921 Query 41958 CTGGAAGAGCCACAGTAAGAAATTCTTGTTCAA-TAGAGACCGCGTCTGTTATAAT-AGA 42015 | || | |||| | || || || || ||||| | | ||| || | | ||||| | Sbjct 419922 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCAT---TGATAATGATT 419978 Query 42016 TCTTACTGTTTCTTCACT--CGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 42073 |||| | | ||| | || ||| | | | |||| ||||||| | || | | Sbjct 419979 TCTTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACA 420038 Query 42074 TCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 42133 | ||||| | || ||||||||| ||||| | ||| |||||||| ||||| || ||||| Sbjct 420039 TTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATC 420098 Query 42134 AGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCT 42193 || | || | || ||||| ||||| | ||||| || |||| |||||||||||||||| Sbjct 420099 AGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGCCAGTAAAGAAGATTCCTTCT 420158 Query 42194 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA----CCGGCACTGTCATGTATCCACTT 42249 ||||| ||||| || | | | |||||||| || | |||| ||||| Sbjct 420159 ACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTTGTCCCCAATCCAACG 420218 Query 42250 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 42309 |||||||| |||| ||| || ||||||||||| ||||| |||||| | |||||| | Sbjct 420219 CAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAA 420278 Query 42310 GtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATG 42369 | |||| || |||||||| || || || || | | |||||||||||| ||| | Sbjct 420279 TTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGG 420338 Query 42370 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTC 42429 |||||||| ||||| || || || || || ||||| | ||| || |||| | ||||| Sbjct 420339 TATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTC 420398 Query 42430 TGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGC 42489 | | |||||| || | | ||||| || || || || |||| ||| |||| || || Sbjct 420399 TTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGC 420458 Query 42490 CAATACATGTTTTATAAAATAT 42511 || ||||| ||| |||||| Sbjct 420459 CAGAACATGGGATATGAAATAT 420480 Score = 293 bits (324), Expect = 3e-74 Identities = 550/802 (69%), Gaps = 15/802 (2%) Strand=Plus/Plus Query 41721 AAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTTTT 41777 |||||||| ||||||| | |||| ||| || | || |||||||||||||| | | Sbjct 414760 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 414819 Query 41778 GGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTCCA 41837 | || ||||| || | || || || || |||||||||||||||| | | ||||| |||| Sbjct 414820 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 414879 Query 41838 TGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATC 41897 | || ||||| ||||| || | ||| | ||||||||| ||| || | || Sbjct 414880 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 414939 Query 41898 TATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 41957 ||| || | || || || || ||||||| | || ||||| | || || || | Sbjct 414940 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 414998 Query 41958 CTGGAAGAGCCACAGTAAGAAATTCTTGTTCAA-TAGAGACCGCGTCTGTTATAAT-AGA 42015 | || | |||| | || || || || ||||| | | ||| || | | ||||| | Sbjct 414999 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCAT---TGATAATGATT 415055 Query 42016 TCTTACTGTTTCTTCACT--CGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 42073 |||| | | ||| | || ||| | | | |||| ||||||| | || | | Sbjct 415056 TCTTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACA 415115 Query 42074 TCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 42133 | ||||| | || ||||||||| ||||| | ||| |||||||| ||||| || ||||| Sbjct 415116 TTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATC 415175 Query 42134 AGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCT 42193 || | || | || ||||| ||||| | ||||| || ||| |||||||||||||||| Sbjct 415176 AGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGACAGTAAAGAAGATTCCTTCT 415235 Query 42194 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA----CCGGCACTGTCATGTATCCACTT 42249 ||||| ||||| || | | | |||||||| || | |||| ||||| Sbjct 415236 ACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTTGTCCCCAATCCAACG 415295 Query 42250 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 42309 |||||||| |||| ||| || ||||||||||| ||||| |||||| | |||||| | Sbjct 415296 CAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAA 415355 Query 42310 GtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATG 42369 | |||| || |||||||| || || || || | | |||||||||||| ||| | Sbjct 415356 TTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGG 415415 Query 42370 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTC 42429 |||||||| ||||| || || || || || ||||| | ||| || |||| | ||||| Sbjct 415416 TATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTC 415475 Query 42430 TGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGC 42489 | | |||||| || | | ||||| || || || || |||| ||| |||| || || Sbjct 415476 TTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGC 415535 Query 42490 CAATACATGTTTTATAAAATAT 42511 || ||||| ||| |||||| Sbjct 415536 CAGAACATGGGATATGAAATAT 415557 >seq75 Length=11204613 Score = 132 bits (146), Expect = 6e-26 Identities = 102/121 (84%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| ||||| | ||| || ||||| ||||| |||||||| || || || || | Sbjct 8448220 CCTCATCTCTGCTAATCAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCT 8448279 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| ||||| || ||||| || |||||||||||||||||||||||||| ||||||| Sbjct 8448280 TGAGCCAGAATATTGATGCAAACGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGG 8448339 Query 42207 C 42207 | Sbjct 8448340 C 8448340 Score = 91.5 bits (100), Expect = 2e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 42325 ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGC 42384 |||||||| || || || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 8452278 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 8452337 Query 42385 CATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTC 42444 || || || || |||||||| | ||| || || | ||| |||||| | |||||| || Sbjct 8452338 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTTATCTGAACTTCTTGGCTAAATCGCTC 8452397 >seq79 Length=8883450 Score = 129 bits (142), Expect = 8e-25 Identities = 110/136 (81%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 707237 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 707296 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 ||||||||||| ||||| || ||||||||||| ||||| ||||| || || | | || | Sbjct 707297 GACTCATTATTCCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 707356 Query 71263 CTATTTCTAAGACCAT 71278 || ||||| | ||||| Sbjct 707357 CTGTTTCTTACACCAT 707372 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 ||||||||||| |||||||| ||||||||||| || | || ||||| |||| | ||| Sbjct 735387 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCCCTGGCACGCTGC 735446 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 || || |||||||| ||||| || | |||||| ||| | | || || ||||||| ||| Sbjct 735447 TCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGAAACTCAAAGATGTCTAAATGCCAAGGT 735506 Query 72142 TCCAAGTATATGGC 72155 |||| ||| || || Sbjct 735507 TCCAGGTAAATAGC 735520 Score = 105 bits (116), Expect = 9e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| || || || |||||||| || |||||| |||| |||| || || || || || | Sbjct 703085 TCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATGT 703144 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 ||| |||||||||||||| ||||| || || || || || ||||| || | | || | Sbjct 703145 TCAAAGACTGACTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTTT 703204 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 | || | |||||||| | ||| ||||||| | |||| | || || |||| Sbjct 703205 TCTGGGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 703255 Score = 105 bits (116), Expect = 9e-18 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820 ||||||| | ||| |||||||| ||||| | || ||||| || || || || || |||| Sbjct 753043 CACTAAACACTTTCTTTGTTTCTTTGTGCAAGTTAGATACAGCAATCCTTGCTGCCAGAA 753102 Query 72821 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCA 72880 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 753103 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 753162 Query 72881 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926 ||| ||| | || || ||| |||| | |||||||| || ||||| Sbjct 753163 GTTCAACCATGGTGACCCCACTATACAAGCCTTGGATTACTTTCAT 753208 Score = 100 bits (110), Expect = 4e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 71381 CATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCAT 71440 |||| || || ||||| || | | || ||| || |||||||| || || || ||||||| Sbjct 728189 CATAGGTTTCATATGGACCGTACTCTTTGGCCAGGTCACAACTGGCTTCCAAGGCTCCAT 728248 Query 71441 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGAT 71500 ||||||| ||||| || || | |||||| || || || || || || ||||| |||| Sbjct 728249 AATAAATAGTTTCAAAGATTTGCTTATTCAGTAACTGGGCCTCTGGACTCTCAAAAGGAT 728308 Query 71501 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTC 71560 | | | | ||||| ||||| || | |||||||| ||||| || || || | || | Sbjct 728309 ATCTCATCAAGATAAAAGCGTCGGCCAGACCTTGAACCCCAATTCCAATGGGGCGATGGC 728368 Query 71561 TCTTATTAGA 71570 ||||| || Sbjct 728369 GTTTATTTGA 728378 >seq199 Length=4383281 Score = 118 bits (130), Expect = 1e-21 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| || || | ||| |||||||| || ||||| ||||| || || | ||| | Sbjct 4204743 CCTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCT 4204684 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| ||||||| ||||| ||||| || ||||| ||||||||||| || ||||||| Sbjct 4204683 TCAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 4204624 Query 42207 CAATAAGTCT 42216 | | || ||| Sbjct 4204623 CCACAACTCT 4204614 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 42562 TACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATG 42621 ||| |||||| | |||||||| ||||| | ||||| ||||||||| ||||||||||| | Sbjct 4193742 TACCTCTTCTGCTGTCCAAAACGATGCCTGTGCCTGTTTATACATCTTCCAGATATCGGG 4193683 Query 42622 ATATTGAATTGGGAAAATAACAAATC 42647 || || ||||| || || ||||||| Sbjct 4193682 GTACTGTATTGGAAAGATGACAAATC 4193657 >seq805 Length=2268304 Score = 111 bits (122), Expect = 2e-19 Identities = 473/734 (64%), Gaps = 30/734 (4%) Strand=Plus/Minus Query 71383 TATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAA 71442 || || || || || || | | || ||| || ||||| || || || | ||||||||| Sbjct 1613369 TAGGTGTCATACGGGCCATACTCTTTGGCCAGGTCACAGCTGGCTTCCAGAGCTCCATAA 1613310 Query 71443 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 71502 ||| ||||||| || || | |||||| || | || || || || ||||| |||| Sbjct 1613309 TAAGTGGTTTCAAAGATTTGCTTATTCAGTAACAGGGCCTCTGGACTCTCAAAATGATAT 1613250 Query 71503 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTC 71562 | | | ||||| || || || | || ||||| || || || | | Sbjct 1613249 CTCATCAAGATAAAAGCATCGGCCA------GA---CCAATTCCAATGGGGCGATAATGT 1613199 Query 71563 TTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 71622 ||||| || | || ||||||||||| || || | | ||| | ||||||||| | Sbjct 1613198 TTATTTGATAAGCATGCCTCTGGAATAGGGTAGTAGCTTACATCAACAATTTTATTCAAG 1613139 Query 71623 TTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTATT 71682 |||| ||| || ||||| || | ||||| ||| ||| || | ||| | Sbjct 1613138 TTTCGGACAATGACTTTAGTGACTTGGGCCAGTTTCTTAAAGTCATATGTGTGCTCTGAT 1613079 Query 71683 ---ACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCG 71739 ||| |||| |||| ||| | || ||||| |||||||| || | || | || | Sbjct 1613078 GTGACATACACATTCAGGGCCATGGAAGCCAGGTTACAAACTGCAAGTTCTCT-GCT--G 1613022 Query 71740 GCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 71799 | ||| | || ||||| ||||| || || ||||| | ||| |||| | || || || Sbjct 1613021 GTATACTCTACTATTTCTGTGCACAGGTTGCTACATTCGATCATTCCCAGGTTCTGCTGG 1612962 Query 71800 TTACTCTT------TTTG-TTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTC 71852 || ||||| |||| |||| | ||| || || | | || |||||| | || Sbjct 1612961 TTGCTCTTCCTTTTTTTGATTACT-GAATCTTTGAGGAGCAAGTAGGGGGTACCAATCTC 1612903 Query 71853 AATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATATT-CTTGTAT 71910 | ||||||| || | ||| || | ||| | | || |||| | | || | || Sbjct 1612902 AGTCTGAGACTCAACAATAGCATACCAAAGCTGCT-GAGCTTCCCCAACTTTGCAAACAT 1612844 Query 71911 CTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCAT--TGT 71968 | | || | || || | ||||| | || || || |||| |||| | || Sbjct 1612843 GACCCTGCT-TCTCATACTTCTCATATAG-CTCTCAAATTCTTCTCTCCAAACTGGATGA 1612786 Query 71969 CTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTT 72028 | | ||||||| ||||| ||||||||||| ||||| || || | | ||||||| Sbjct 1612785 CCAGGTCAGGACACTCATTTGGACACATCAAAGACCAGTCCTGATTAGTTTCCACTCGTT 1612726 Query 72029 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGT 72088 |||| |||||||| |||||||||||| | | | ||||| |||| | ||||| || | Sbjct 1612725 TCATGAAGAGATCTGGAATCCAAAGACCAAAGGAAAGATCCCTGGCACGCTGCTCTTCCT 1612666 Query 72089 TTCCTGTATTCTTT 72102 ||||||| ||| || Sbjct 1612665 TTCCTGTGTTCCTT 1612652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670713446070000