Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq721 114 1e-20 >seq721 Length=8920270 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct 5232608 GGTTGCCAAGCCTTGTCAGAGATGATCCAGTTTTACCTGGAGGAGGTGATGCCCCAGGCT 5232549 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || ||| | || ||| | || || ||||| || || ||||| |||||||||||||| Sbjct 5232548 GAGAACCACAGCCCAGACGTCAAGGAGCACGTGAACTCTCTGGGGGAAAAGCTGAAGACG 5232489 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 | || | || ||||| ||||| Sbjct 5232488 CTCAGGTTGCGGCTGCGGCGCTG 5232466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429788404634000