Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq53 720 0.0 seq48864 311 1e-79 seq79 131 2e-25 seq75 129 7e-25 seq199 118 1e-21 seq805 104 3e-17 seq44217 87.8 2e-12 >seq53 Length=2810707 Score = 720 bits (798), Expect = 0.0 Identities = 1442/2125 (68%), Gaps = 33/2125 (2%) Strand=Plus/Minus Query 62015 TGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAA 62074 ||| ||| | || | || ||| ||||| || || || | | | |||| || || || Sbjct 1303543 TGCTGGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAATTCTGCTTCCAGCCATAGAA 1303484 Query 62075 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 62134 |||||||| || |||||| ||| | || || || ||||||||||||| ||| ||||| Sbjct 1303483 GTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATATTCAAAGACTGACT 1303424 Query 62135 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTC 62194 |||||| ||||| | | || | || ||||| || | | || || || | ||||| Sbjct 1303423 TTGATCAATGAAAGTATCTCTCTTGGCTGCCATCTTGAGAACAGTTTTCTGGGAGATTTC 1303364 Query 62195 CCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG-TAT--TCTGAATGGA 62251 ||| ||||| ||||||| | ||| | || || | || | || ||| |||| || || Sbjct 1303363 CCACATAGTCTTATAAAGTTCCTTCAGGTCATCAGTAATTTCTGGTATGCTCTGGATAGA 1303304 Query 62252 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62311 ||| ||| |||||| ||| || ||||| |||||||| || | ||| || | Sbjct 1303303 GCCATTGCATGCAATAATCTGATTTTTCATCTCTTCATTCCACAAGCCCCACTCAGTAAG 1303244 Query 62312 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 62371 | || | || | || ||||| || | ||||||||||| ||||| ||||| ||||||| Sbjct 1303243 ATCTTTCAGTAAGTGAGGATTTACAATCTGAAATTCTCCTGACAAGACTCTGTGAGTGTA 1303184 Query 62372 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62431 || || |||||||| ||||| | ||||||||||| ||||| || |||||||||| || Sbjct 1303183 GATGTTGCTGGTATAAGGTTCAATGGACTCATTATTCCCCAAGATCTGAGCAGTTGCAGC 1303124 Query 62432 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62491 ||| | ||| || || | | |||||| ||||| | ||| || || || || || || Sbjct 1303123 AGTAGTCATTGGGGCAATAAGTAAACTGTTTCTTACACCATACTTTGCAATCTTGTCCTT 1303064 Query 62492 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 62551 ||| ||| ||| | ||| || || | || ||| || ||||| Sbjct 1303063 GAGAAGTTTCCAGTCCCACAGGTCTGTGGGAGTAACATTCCACACATCATACTGAAGAAT 1303004 Query 62552 ACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 62611 | || || | || || |||| || || ||||| || | || | || || || Sbjct 1303003 TTCTTTGCTTACTGGAGAGCCCTCATAGGTTTCCTATGGACCATACTCTTTGGCCAGGTC 1302944 Query 62612 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG 62671 ||| || || || || || || |||||||| |||| ||||| | |||||| || || Sbjct 1302943 ACAGCTGGCTTCCAAGGCTCCATAATAAATAGTTTGAAAGATTTGCTTATTCAGTAACTG 1302884 Query 62672 TGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAAC 62731 | || | || ||||||||||| | | | ||||| || || || | ||||||| Sbjct 1302883 GACCTCTGGACTTTCAAATGGATATCTCATCAAGATAAAAGCATCAGCCAGAACTTGAAC 1302824 Query 62732 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 62791 ||||| || || || ||| | ||||| || | | || ||||||||||| || || Sbjct 1302823 CCCAATTCCAATGGGGTGATGGCGTTTATTTGATACGTATGCCTCTGGAATAGGGTAGTA 1302764 Query 62792 ATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTT---TGACCACATCCTTCAG 62848 || ||| ||||||||||| | |||| ||||| |||| |||| || || || Sbjct 1302763 GTTTCTATTAATAATTTTATTCAAGTTTCGAACAATGACTTCAGTGACTTCAGCC---AG 1302707 Query 62849 TTTGAGAAAATCAAATCGCCCATCTATT---ACAAACATGTTCAAGGCAACAGATGCCAG 62905 || ||| || | ||| | ||| |||| |||| ||| | || |||| Sbjct 1302706 CTTCTTAAAGTCGTACGTGTGTTCTGATGTGACATACATATTCAGGGCCAGGGAAGCCAA 1302647 Query 62906 ATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTA 62963 |||||||| || ||||| | | || | ||| | || ||| || ||||| || || Sbjct 1302646 GTTACAAACTGCAACCTCCTCTTTGCTG--GTATACTCTACTATTTCTGTGCACAGGTTG 1302589 Query 62964 CTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAA 63023 || || ||||| | ||| | || || || || ||||| | ||||| | || || || Sbjct 1302588 CTGCATTTGATTGCTCCCAGGTTCTGCTGGTTGCTCTTATGATTACAGGAATTTTTGTAG 1302529 Query 63024 AGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCG 63082 || ||| | || || |||| || ||||||| || ||||| || | ||| | | || | Sbjct 1302528 AGCATGTAGGG-GTGTCAGTCTCTGTCTGAGACTCAATAATAGCATACCAAAGCTGCT-G 1302471 Query 63083 AGCCTTTA-----TTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGT 63137 ||| || | || | || || || ||| ||| | | | | | ||| || Sbjct 1302470 AGCTTTCACAACTTTGTGAATGTGACCCTGCTT-CTCATACTTTTCAT--ATAGCTTC-- 1302416 Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || || || ||||||||||| | |||| |||||||| |||| ||||||||||| ||| Sbjct 1302415 TCAAATTCTTCTCCCCAAACTTCATCCAGGCCAGGACACTCATTTGGACACATCAAAGAC 1302356 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || || | | | ||| | |||||| |||||||| | ||||||||| || | || Sbjct 1302355 CAGTCCTGATTAGTTTCCACCCATTTCATGAAGAGATCTGAAATCCAAAGGGCAAAGAAA 1302296 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 ||||| || | ||||| || |||||||| ||||| || | |||||| ||| | | Sbjct 1302295 AGATCCCTCGCATGCTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGAAACTCAAAG 1302236 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 || || ||||| | |||| || ||| || || | | ||| | || |||||||| || Sbjct 1302235 ATGTCTAAATGCTAAGGTTTCAGGTAAATAGCAAATGCCCCAAGACGCTTGTTTCCACCT 1302176 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 ||||||| ||||| ||| || ||| | || ||||||| |||||| | || || || || Sbjct 1302175 TGATCTACGTATCGAGCTGTATTACTGTATACTCTCAGCATTGGTACAAGGCCATTGGAA 1302116 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63497 | ||||| || || | | ||||| ||| | || |||||| ||| | | | ||| Sbjct 1302115 TTGCCATTAGTCCCAGCAAGGTAGCTGCCAGTAGCCCGAATACAACTCACAGCAACACCA 1302056 Query 63498 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCT 63557 |||||||| || ||||| || || || || | |||| || ||||| || || || Sbjct 1302055 ATTCCCCCAGCAGACTTAGAAATCAAAGCACACTGCTTTAGAGTATCATAAATCCCTTCA 1301996 Query 63558 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 63617 ||||| ||||| ||||||| || || ||| || |||| | || | ||| | || || Sbjct 1301995 ATGCTGTCATCTTTCATGTTCAGAAGGAAATAGGTAGAAAGTTCTGGGCGATTGGTGCCA 1301936 Query 63618 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63677 ||||| || | || ||||| || || || ||||| || |||||||| || || || || Sbjct 1301935 GCATTGAAGAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGAAAGAAGGTTATATGTT 1301876 Query 63678 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63737 ||||| || | || || || || ||||| || || | || | ||| |||||||| Sbjct 1301875 TCAATTGCAGCATCAATGTCTTCTTTGTGAATCCCCACAGATACCCTCATCAACATGTGT 1301816 Query 63738 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63797 || ||||| ||| | | || | || |||||||| ||||| | ||||| | ||| Sbjct 1301815 TGCGGTCTGTCAGCCACTTTCCCACTAATCTTCAACAAATAGGACTGCTCCAATGCCTTA 1301756 Query 63798 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 63857 || |||||||| ||||| ||||| ||||| || || || || | || || || ||| Sbjct 1301755 AAGCCAAAATAATTGTAAGAAAAATCTCGATCATAGATGATGGCAGAATTTAGGCAATCT 1301696 Query 63858 TTATATTTGTTAACTATATCCA-TGGTGATACTT-GAAATAATCGGAGAATGTTTCCCAT 63915 |||| ||| || |||| || || |||| | | || | ||| ||||| |||| Sbjct 1301695 TTATTGGCCAAAACAATGTCCAGTGTTG--ACTTGGCCACCATGGAAGAGTGTTTGCCAT 1301638 Query 63916 TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTT 63975 | | ||||| | |||||| | | || |||||||| |||||||| | ||| ||||||| Sbjct 1301637 TATGTGGATTTATGTAGTTGTAAAGGTCTTCCATCACATCACTAAACATTTTCTTTGTTT 1301578 Query 63976 CCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTG 64035 | ||||| | || ||||| || || || || || ||||||||||| || || || | | Sbjct 1301577 CTTTGTGCAAGTTAGATACAGCAATCCTTGCTGCCAGAATGGCATAGTCAGGGTGCTTAG 1301518 Query 64036 TAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCAT 64095 |||| | || || ||| |||| || |||| ||| || | ||| ||| | || || ||| Sbjct 1301517 TAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGTTCAACCATGGTGACCCCAC 1301458 Query 64096 TATATATTCCTTGAATAACCTTCAT 64120 |||| | ||||| || || ||||| Sbjct 1301457 TATACAAGCCTTGGATTACTTTCAT 1301433 >seq48864 Length=438413 Score = 311 bits (344), Expect = 1e-79 Identities = 554/802 (69%), Gaps = 15/802 (2%) Strand=Plus/Plus Query 32960 AAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTTT 33016 |||||||| ||||||| | |||| ||| || | || |||||||||||||| | | Sbjct 419683 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 419742 Query 33017 GGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCA 33076 | || ||||| || | || || || || ||||| |||||||||| | | ||||| |||| Sbjct 419743 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 419802 Query 33077 TGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATC 33136 | || ||||| ||||| || | ||| | ||||||||| ||| || | || Sbjct 419803 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 419862 Query 33137 TATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 33196 ||| || || || || || || ||||||| | || ||||| | || || || | Sbjct 419863 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 419921 Query 33197 CTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGAT-ACCGCATCTGTTATAAT-AGA 33254 | || | |||| | || || || || ||||| | | || |||| | ||||| | Sbjct 419922 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCAT---TGATAATGATT 419978 Query 33255 TCTAACGGTTTCTTCACT--CGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 33312 ||| | | ||| | || ||| || | | |||| ||||||| | || | | Sbjct 419979 TCTTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACA 420038 Query 33313 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 33372 | ||||| | || ||| ||||| ||||| ||||| |||||||| ||||| || ||||| Sbjct 420039 TTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATC 420098 Query 33373 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCT 33432 || | || | || ||||| ||||| | || || || |||| |||||||||||||||| Sbjct 420099 AGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGCCAGTAAAGAAGATTCCTTCT 420158 Query 33433 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA----CCGGCGCTGTCATGTATCCACTT 33488 ||||| ||||| || | | | |||||||| || | |||| ||||| Sbjct 420159 ACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTTGTCCCCAATCCAACG 420218 Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33548 |||||||| |||| ||| || ||||||||||| ||||| |||||| | |||||| | Sbjct 420219 CAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAA 420278 Query 33549 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33608 | |||| || |||||||| ||||| || || | | |||||||||||| ||| | Sbjct 420279 TTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGG 420338 Query 33609 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 33668 |||||||| ||||| || || || || || ||||| | || || ||||| | ||||| Sbjct 420339 TATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTC 420398 Query 33669 TGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33728 | | |||||| ||| ||| |||||||| || || || |||| ||| |||| || || Sbjct 420399 TTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGC 420458 Query 33729 CAATACATGTTTTATAAAATAT 33750 || ||||| ||| |||||| Sbjct 420459 CAGAACATGGGATATGAAATAT 420480 Score = 306 bits (338), Expect = 5e-78 Identities = 553/802 (69%), Gaps = 15/802 (2%) Strand=Plus/Plus Query 32960 AAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTTT 33016 |||||||| ||||||| | |||| ||| || | || |||||||||||||| | | Sbjct 414760 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGGTTGGACTTGACATAACTCCCATCCTCT 414819 Query 33017 GGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCA 33076 | || ||||| || | || || || || ||||| |||||||||| | | ||||| |||| Sbjct 414820 GATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTCCA 414879 Query 33077 TGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATC 33136 | || ||||| ||||| || | ||| | ||||||||| ||| || | || Sbjct 414880 TAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAGTC 414939 Query 33137 TATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 33196 ||| || || || || || || ||||||| | || ||||| | || || || | Sbjct 414940 TATTGGCAACAAACTCAATGTACTGCTTCATCAAG-CGCAGTTCATCTCAATGAGCTTCA 414998 Query 33197 CTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGAT-ACCGCATCTGTTATAAT-AGA 33254 | || | |||| | || || || || ||||| | | || |||| | ||||| | Sbjct 414999 CAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCAT---TGATAATGATT 415055 Query 33255 TCTAACGGTTTCTTCACT--CGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 33312 ||| | | ||| | || ||| || | | |||| ||||||| | || | | Sbjct 415056 TCTTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACA 415115 Query 33313 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 33372 | ||||| | || ||| ||||| ||||| ||||| |||||||| ||||| || ||||| Sbjct 415116 TTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATC 415175 Query 33373 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCT 33432 || | || | || ||||| ||||| | || || || ||| |||||||||||||||| Sbjct 415176 AGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGACAGTAAAGAAGATTCCTTCT 415235 Query 33433 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA----CCGGCGCTGTCATGTATCCACTT 33488 ||||| ||||| || | | | |||||||| || | |||| ||||| Sbjct 415236 ACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTTGTCCCCAATCCAACG 415295 Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33548 |||||||| |||| ||| || ||||||||||| ||||| |||||| | |||||| | Sbjct 415296 CAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAA 415355 Query 33549 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33608 | |||| || |||||||| ||||| || || | | |||||||||||| ||| | Sbjct 415356 TTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGG 415415 Query 33609 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 33668 |||||||| ||||| || || || || || ||||| | || || ||||| | ||||| Sbjct 415416 TATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTC 415475 Query 33669 TGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33728 | | |||||| ||| ||| |||||||| || || || |||| ||| |||| || || Sbjct 415476 TTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGC 415535 Query 33729 CAATACATGTTTTATAAAATAT 33750 || ||||| ||| |||||| Sbjct 415536 CAGAACATGGGATATGAAATAT 415557 >seq79 Length=8883450 Score = 131 bits (144), Expect = 2e-25 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 707237 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATG 707296 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 ||||||||||| ||||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 707297 GACTCATTATTCCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 707356 Query 62457 CTATTTCTAAGACCGTA 62473 || ||||| | ||| || Sbjct 707357 CTGTTTCTTACACCATA 707373 Score = 105 bits (116), Expect = 8e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121 |||| || || || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 703085 TCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATGT 703144 Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181 ||| ||| ||||||||||| ||||| || || || || || ||||| || | | || | Sbjct 703145 TCAAAGACTGACTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTTT 703204 Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62232 | || | |||||||| | ||| ||||||| | |||| | || || |||| Sbjct 703205 TCTGGGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 703255 Score = 104 bits (114), Expect = 3e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 63215 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 63274 |||||||||||| |||||||| ||||||||||| || | || ||||| |||| | || Sbjct 735386 CACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCCCTGGCACGCTG 735445 Query 63275 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63334 || || |||||||| ||||| || | |||||| ||| | | || || ||||||| || Sbjct 735446 CTCTTCCTTTCCTGTGTTCTTCTTTAAATCGAGAAACTCAAAGATGTCTAAATGCCAAGG 735505 Query 63335 TTCCAAGTATATGGC 63349 ||||| ||| || || Sbjct 735506 TTCCAGGTAAATAGC 735520 Score = 102 bits (112), Expect = 1e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 63955 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 64014 ||||||| | ||| |||||||| ||||| | || ||||| || || || || || |||| Sbjct 753043 CACTAAACACTTTCTTTGTTTCTTTGTGCAAGTTAGATACAGCAATCCTTGCTGCCAGAA 753102 Query 64015 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64074 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 753103 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 753162 Query 64075 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64120 ||| ||| | || || ||| |||| | ||||| || || ||||| Sbjct 753163 GTTCAACCATGGTGACCCCACTATACAAGCCTTGGATTACTTTCAT 753208 >seq75 Length=11204613 Score = 129 bits (142), Expect = 7e-25 Identities = 101/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| ||||| ||||| ||||| || ||||| ||||| |||||||| || || || || | Sbjct 8448220 CCTCATCTCTGCTAATCAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCT 8448279 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| ||||| || || || || |||||||||||||||||||||||||| ||||||| Sbjct 8448280 TGAGCCAGAATATTGATGCAAACGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGG 8448339 Query 33446 C 33446 | Sbjct 8448340 C 8448340 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 |||||||| ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 8452278 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 8452337 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683 || || || || |||||||| | || || || ||||| |||||| | |||||| || Sbjct 8452338 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTTATCTGAACTTCTTGGCTAAATCGCTC 8452397 Query 33684 CGCC 33687 | || Sbjct 8452398 CACC 8452401 >seq199 Length=4383281 Score = 118 bits (130), Expect = 1e-21 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| ||||| || || ||||| |||||||| || ||||| ||||| || || | ||| | Sbjct 4204743 CCTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCT 4204684 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| ||||| | ||| || ||||| || ||||| ||||||||||| |||||||||| Sbjct 4204683 TCAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 4204624 Query 33446 CAATAAGTCT 33455 | | || ||| Sbjct 4204623 CCACAACTCT 4204614 Score = 93.3 bits (102), Expect = 5e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745 ||||||||||||| || ||||| ||||||||||||||||| || || | || |||| Sbjct 4196940 CCAAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGATGTGAGAGATAA 4196881 Query 33746 AATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 33796 |||| ||||| ||||| |||| |||||||| | | || ||| || |||| Sbjct 4196880 AATACTTTTCATCTGGCTTTAGCTTATTCCAGTGAGGGAGATCCTTTGATA 4196830 >seq805 Length=2268304 Score = 104 bits (114), Expect = 3e-17 Identities = 456/711 (64%), Gaps = 38/711 (5%) Strand=Plus/Minus Query 62604 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 62663 || || ||||| || || || | || || |||||| ||||||| ||||| | |||||| Sbjct 1613342 GCCAGGTCACAGCTGGCTTCCAGAGCTCCATAATAAGTGGTTTCAAAGATTTGCTTATTC 1613283 Query 62664 AGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAAT 62723 || | || || | || ||||| |||| | | | ||||| || || || | Sbjct 1613282 AGTAACAGGGCCTCTGGACTCTCAAAATGATATCTCATCAAGATAAAAGCATCGGCCAG- 1613224 Query 62724 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 62783 |||||| || || || | || ||||| || | || ||||||||| Sbjct 1613223 --------ACCAATTCCAATGGGGCGATAATGTTTATTTGATAAGCATGCCTCTGGAATA 1613172 Query 62784 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 62843 || || || | | ||| | ||||||||| | |||| |||||| ||||| || | Sbjct 1613171 GGGTAGTAGCTTACATCAACAATTTTATTCAAGTTTCGGACAATGACTTTAGTGACTTGG 1613112 Query 62844 TTCAGTTTGAGAAAATCAAATC---GCCCATCTATTACAAACATGTTCAAGGCAACAGAT 62900 |||||| ||| ||| || || | | | ||| ||| |||| ||| | || Sbjct 1613111 GCCAGTTTCTTAAAGTCATATGTGTGCTCTGATGTGACATACACATTCAGGGCCATGGAA 1613052 Query 62901 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 62960 ||||| |||||||| || | || | || | ||| | || ||| || ||||| || Sbjct 1613051 GCCAGGTTACAAACTGCAAGTTCTCT-GCTG--GTATACTCTACTATTTCTGTGCACAGG 1612995 Query 62961 TTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTT------TTTG-TTACACGC 63013 || ||||| | ||| |||| | || || || || ||||| |||| |||| | Sbjct 1612994 TTGCTACATTCGATCATTCCCAGGTTCTGCTGGTTGCTCTTCCTTTTTTTGATTACT-GA 1612936 Query 63014 ATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 63073 ||| || || | | | || |||||| | ||| ||||||| || | ||| || | ||| Sbjct 1612935 ATCTTTGAGGAGCAAGTAGGGGGTACCAATCTCAGTCTGAGACTCAACAATAGCATACCA 1612876 Query 63074 GA-CGACTCGAGCCTTTA-----TTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGT 63127 | | || |||| | || | | || || ||| ||| | | | | | | Sbjct 1612875 AAGCTGCT-GAGCTTCCCCAACTTTGCAAACATGACCCTGCTT-CTCATACTTCTCATAT 1612818 Query 63128 ATACAATCGTTCGAACTCGTCTCCCCAAACAT--TGTCCAATCCAGGACATTCATCCGGA 63185 | || || || || |||| |||||| || ||| ||||||| |||| ||| Sbjct 1612817 AGC---TC--TCAAATTCTTCTCTCCAAACTGGATGACCAGGTCAGGACACTCATTTGGA 1612763 Query 63186 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63245 |||||||| ||||| || | | | |||||||||||| |||||||| ||||||||| Sbjct 1612762 CACATCAAAGACCAGTCCTGATTAGTTTCCACTCGTTTCATGAAGAGATCTGGAATCCAA 1612703 Query 63246 AGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 63296 ||| | | | ||||| |||| | || || || |||||||| ||| || Sbjct 1612702 AGACCAAAGGAAAGATCCCTGGCACGCTGCTCTTCCTTTCCTGTGTTCCTT 1612652 Score = 89.7 bits (98), Expect = 6e-13 Identities = 239/360 (66%), Gaps = 13/360 (4%) Strand=Plus/Minus Query 63387 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTG 63446 |||| ||| || | ||| | ||||||| ||| || | || || | | | ||||| Sbjct 1611100 TATCAAGCTGTACTGTTACATACTCTCAGCATCGGTACAAGGCCATCGGCATTGCCATTA 1611041 Query 63447 GTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 63506 || || | | |||||| ||||| || | |||| ||| | | | ||| | | |||| Sbjct 1611040 GTCCCAGCAACATAGCTGCCACTAGCTCAAATACAACTCACAGCAACACCAACTTCCCCA 1610981 Query 63507 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCA 63566 || |||||| || ||||| ||| | || | |||||||| || || | |||| || Sbjct 1610980 GCAGATTTAGAAATCAATGCACATTGCTTGAGAGTGTCATAAATGCCTTTGGTGCTGTCG 1610921 Query 63567 TCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA-CGACTAGTTCCCGCATTAAA 63625 || ||||| | || || ||||||||||| | || |||| | | | || || ||||| | Sbjct 1610920 TCTTTCATGCTCAGAAGTAAACAGCTAGAAAGTT-GTGAGCCATTGGTGCCAGCATTGA- 1610863 Query 63626 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63685 | |||| || || || ||||| || ||||| || ||||| | ||||| || Sbjct 1610862 ----GAGTGAGAGGCATGAGTGAACCACTTCTCAGA---GAGGTTGTATATTTCAATTGC 1610810 Query 63686 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63745 | || || || || |||| ||| | | || | ||| |||||||| || ||||| Sbjct 1610809 AGCATCAATGTCTTCTTTGTGAA--CCT-CAGATACCCTCATCAACATGTGTTGCGGTCT 1610753 >seq44217 Length=341162 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/207 (70%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 31095 TTGTACTTCTTCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 31154 ||| |||||||| | |||||| ||| | || |||| | | || ||||| || |||| || Sbjct 123247 TTGAACTTCTTCTATTTCTGGGTAAAAAATTCGTTCACAAATGAGCTGTGCAATTCGGTC 123188 Query 31155 TCCAGTATTTACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCC 31214 || | || || | |||| | ||| ||| ||||| || | || || | ||||| Sbjct 123187 ACCTTTTTTAACTTCAAACTTTTCTTTGCCAAAATTAAATAGTACAACACCAACATTTCC 123128 Query 31215 CCTATAATCTTCGTCTATTACACCGCCTCCTATAT---CAATGCCTTTTAGGGACAGACC 31271 ||||||||||| ||||| ||||| |||||| || | | | |||| | || || Sbjct 123127 TCTATAATCTTCATCTATGACACCAGCTCCTACATCTACGAAGTGTTTTGCAGCCAAGCC 123068 Query 31272 AGACCTAGGAGCTATTCTACCATAGCA 31298 ||| | ||||||| ||| ||||| || Sbjct 123067 AGAACATGGAGCTACTCTTCCATAACA 123041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622552017870000