Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq43265 120 3e-22 seq460 120 3e-22 seq459 120 3e-22 seq139 111 1e-19 seq338 107 2e-18 seq472 105 6e-18 seq44605 102 7e-17 seq766 96.9 3e-15 seq432 96.9 3e-15 seq48498 95.1 1e-14 seq47707 93.3 4e-14 seq42965 93.3 4e-14 seq183 93.3 4e-14 seq46174 91.5 1e-13 seq5 91.5 1e-13 seq436 87.8 2e-12 seq50077 84.2 2e-11 seq250 82.4 6e-11 >seq43265 Length=2440742 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||||||||| || || || || || | || || || || |||| || | || | Sbjct 2202760 AAAGATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCAAGGTCAGGCC 2202701 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 || || ||| | || || |||| ||||| |||||||||||||| || |||||| | Sbjct 2202700 CAGTGACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAGGAGGGCATCCCACCCAA 2202641 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || ||||| |||||||||||||||||| | || ||| |||||| | || || || Sbjct 2202640 CCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTTTCTGACTA 2202581 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || ||||| |||||| | ||| | || |||| |||| || || Sbjct 2202580 TAACATCCAGAAAGAGTCCACCCTCCATCTGGTGCTGCGTGTGCGAGGCGG 2202530 >seq460 Length=2238155 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||||||||| || || | || || | || || || || |||| || || || || | Sbjct 439565 AAAGATGCAGATCTTCATGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTCGAGCC 439624 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 || || ||| | || || |||| |||| |||||||||||||| || ||||||| Sbjct 439625 CAGTGACACCATCGAGAATGTCAAGGCCAAAACCCAAGACAAGGAGGGCATCTCACCCGA 439684 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || || || |||||||| ||||||||| | || ||| |||||| ||||| || || Sbjct 439685 CCAGCAGCGCCTGATATTTGCGGGCAAACAGCTGGAAGATGGCCGCACTGTCTCTGACTA 439744 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| || | ||| |||||| | ||| | || || | |||| || || Sbjct 439745 CAACATCCAGAGAGAGTCCACCCTGCATCTGGTGCTGTGTCTGCGAGGTGG 439795 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||||||||| || || | || || | || || || || |||| || || || || | Sbjct 438848 AAAGATGCAGATCTTCATGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTCGAGCC 438907 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 || || ||| | || || |||| |||| |||||||||||||| || ||||||| Sbjct 438908 CAGTGACACCATCGAGAATGTCAAGGCCAAAACCCAAGACAAGGAGGGCATCTCACCCGA 438967 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || || | |||||||| ||||||||| | || ||| |||||| ||||| || || Sbjct 438968 CCAGCAGCGCTTGATATTTGCGGGCAAACAGCTGGAAGATGGCCGCACTGTCTCTGAATA 439027 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| | ||| |||||| | ||| | || ||| |||| || || Sbjct 439028 CAACATCC----AGAGTCCACCCTGCATCTGGTGCTGCATCTGCGAGGCGG 439074 >seq459 Length=1943734 Score = 120 bits (132), Expect = 3e-22 Identities = 164/228 (72%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||||||||| || || | || || | |||| || || ||| ||||| || ||| | Sbjct 1018948 AAAGATGCAGATCTTCATGAAGACCCTGCCCGGCAAGACCACCACCCTTGAGGTCGAACC 1019007 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 || || ||| | | || ||||| ||||| ||||||||||| ||||| |||| || Sbjct 1019008 CAGTGACACCATCAAGAATGTCAAAACCAAAATCCAAGACAAGGAAGGTATCCCACGGGA 1019067 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || |||| ||| |||||||| ||||||||| | || ||| |||||| ||||| | || Sbjct 1019068 CCAGCAACATCTGATATTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCCAACTA 1019127 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGG 22442 ||| || || ||||| ||||| | || || || |||| |||| || Sbjct 1019128 CAA-ATCCAGAAAGAGTCCACGCTGCACTTGGTGCTGCGTCTGCGAGG 1019174 Score = 120 bits (132), Expect = 3e-22 Identities = 164/228 (72%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||||||||| || || | || || | |||| || || ||| ||||| || ||| | Sbjct 1020452 AAAGATGCAGATCTTCATGAAGACCCTGCCCGGCAAGACCACCACCCTTGAGGTCGAACC 1020511 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 || || ||| | | || ||||| ||||| ||||||||||| ||||| |||| || Sbjct 1020512 CAGTGACACCATCAAGAATGTCAAAACCAAAATCCAAGACAAGGAAGGTATCCCACGGGA 1020571 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || |||| ||| |||||||| ||||||||| | || ||| |||||| ||||| | || Sbjct 1020572 CCAGCAACATCTGATATTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCCAACTA 1020631 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGG 22442 ||| || || ||||| ||||| | || || || |||| |||| || Sbjct 1020632 CAA-ATCCAGAAAGAGTCCACGCTGCACTTGGTGCTGCGTCTGCGAGG 1020678 >seq139 Length=10686148 Score = 111 bits (122), Expect = 1e-19 Identities = 151/211 (72%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 22212 TGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271 || ||||||||| || || || || || | || || || || |||| || || || || Sbjct 399961 TGCAAAGATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGA 400020 Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331 ||| || ||| |||| || |||| ||||| |||||||||||||| || || || Sbjct 400021 GGCCAGTGACACCATGGAGAATGTCAAGGCCAAAATCCAAGACAAGGAGGGCATCCCCCC 400080 Query 22332 CGATCAACAAC------GTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGT 22385 | | || || | |||| |||||||||||||||||| | |||||| ||||| | Sbjct 400081 CCACCACCACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCATGCT 400140 Query 22386 CTCCGATTACAACATTCAAAAAGAATCCACC 22416 || || | |||||| || ||||| |||||| Sbjct 400141 GTCTGACTGCAACATCCAGAAAGAGTCCACC 400171 >seq338 Length=5205875 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || ||||| | || || || || |||| || || || ||| | Sbjct 2398247 AAGATGCAGATTTTCGTAAAAACCCTCACAGGGAAGACCATCACCCTCGAGGTTGAACCG 2398188 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | ||| ||||| || || ||||| || ||||| || ||| Sbjct 2398187 TCGGATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGAT 2398128 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||||| ||||||||||| || ||| || || | || || ||| Sbjct 2398127 CAGCAAAGACTGATTTTTGCTGGCAAACAGTTGGAAGATGGGCGTACTTTGTCTGACTAC 2398068 Query 22396 AACATTCAAAAAGAATCCA 22414 ||||| ||||| || |||| Sbjct 2398067 AACATCCAAAAGGAGTCCA 2398049 >seq472 Length=1492349 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || ||||| | || || || || |||| || || || ||| | Sbjct 1223055 AAGATGCAGATTTTCGTAAAAACCCTCACAGGGAAGACCATCACCCTCGAGGTTGAACCG 1223114 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | ||| ||||| || || ||||| | ||||| ||||| Sbjct 1223115 TCGGATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGAAATTCCTTCCGAT 1223174 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||||| ||||||||||| || || || || | || || ||| Sbjct 1223175 CAGCAAAGACTGATTTTTGCTGGCAAACAGTTGGAAGACGGGCGTACTTTGTCTGACTAC 1223234 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || ||||| | ||| | || ||| || | || || ||| Sbjct 1223235 AACATCCAAAAGGAGTCCACGCTTCATCTTGTGTTGAGACTTCGTGGTGGT 1223285 >seq44605 Length=175201 Score = 102 bits (112), Expect = 7e-17 Identities = 144/201 (72%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| |||||||| ||||| | || || || || |||| || || || ||| || Sbjct 860 AAGATGCAGATTTTTGTAAAAACCCTTACAGGGAAGACCATCACCCTAGAGGTTGAACCC 801 Query 22276 ACCG-ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | |||| | || || | ||| ||||| || | ||||| || ||||| ||||| Sbjct 800 TTTGGATACAATAGAAAATGTAAAAGCCAAAATCCAGGGTAAGGAAGGAATTCCTCCCGA 741 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||| ||| | || || ||||| ||||||||||| || ||| | || | || || || Sbjct 740 TCAGCAAAGACTGATTTTTGCTGGCAAACAGTTGGAAGATGGGCATACTTTGTCTGACTA 681 Query 22395 CAACATTCAAAAAGAATCCAC 22415 |||||| ||||| || ||||| Sbjct 680 CAACATCCAAAAGGAGTCCAC 660 >seq766 Length=1455367 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| | |||||| || || | || || || || |||| ||||| || ||| | Sbjct 21294 AAGATGCAGACTTTTGTAAACACCCTCACAGGGAAGACCATCACCCTTGAGGTTGAACCG 21353 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 ||||| | || || | ||| ||||| || || ||||| || ||||| || | | Sbjct 21354 TTGGATACAATAGAAAATGTAAAAGGCAAAATCCAGGATAAGGAAGGAATTCCTCCTGTT 21413 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||||| ||||||||||| || ||| | || | || || ||| Sbjct 21414 CAGCAAAGACTGATTTTTGCTGGCAAACAGTTGGAAGATGGGTGTACTTTGTCTGACTAC 21473 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 | ||| ||||| || ||||| | ||| | || ||| || | || || ||| Sbjct 21474 ATCATCCAAAAGGAGTCCACACTTCATCTTGTGTTGAGACTTCGTGGTGGT 21524 >seq432 Length=6714211 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| | |||| | || || || || ||||| || || || ||| Sbjct 4307296 AAGATGCAGATTTTCATAAAAATCCTCACAGGGAAGACCGTCACCCTCGAGGTTGAACGA 4307237 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | ||| ||||| || || ||||| || ||||| || ||| Sbjct 4307236 TCAGATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGAT 4307177 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||||| ||||||||||| || ||| || || | || || ||| Sbjct 4307176 CAGCAAAGACTGATTTTTGCTGGCAAACAGTTGGAAGATGGGCGTACTTTGTCTGACTAC 4307117 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || ||| | ||| | || ||| || | || || ||| Sbjct 4307116 AACATCCAAAAGGAGTCCGGGCTTCATCTTGTGTTGAGACTTCGTGGTGGT 4307066 >seq48498 Length=215879 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279 |||||||||| || ||||| | || || || || |||| || || || ||| | | | Sbjct 7365 TGCAAATTTTCGTAAAAACCCTCACAGGGAAGACCATCACCCTCGAGGTTGAACCGTCGG 7306 Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339 |||| | || || | ||| ||||| || || ||||| || ||||| || |||| | Sbjct 7305 ATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCGGC 7246 Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399 | | || || ||||| ||||||||||| || ||| || | | || || ||||||| Sbjct 7245 GAAGACTGATTTTTGCTGGCAAACAGTTGGAAGATGGGCGTTCTTTGTCTGACTACAACA 7186 Query 22400 TTCAAAAAGAATCCA 22414 | ||||| ||||||| Sbjct 7185 TCCAAAAGGAATCCA 7171 >seq47707 Length=6282480 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| | ||||| | || || || || |||| ||||| || ||| | Sbjct 1043591 AAGATGCAGATTTTCATAAAAACCCTCACAGGGAAGACCATCACCCTTGAGGTTGAACCG 1043650 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| | || || | ||| ||||| | || ||||| || ||||| || ||| Sbjct 1043651 TAAAATACAATAGAAAATGTAAAAGCCAAAATCAAGGATAAGGAAGGAATTCCTCCTGAT 1043710 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||||| | ||| ||||| || ||| || || | || |||||| Sbjct 1043711 CAGCAAAGACTGATTTTTGCTGCCAAGCAGTTGGAAGATGGGCGTACTTTGTCTGATTAC 1043770 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434 ||||| ||||| || ||||| | ||| | || ||| || Sbjct 1043771 AACATCCAAAAGGAGTCCACGCTTCATCTTGTGTTGAGA 1043809 >seq42965 Length=562198 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | || || || || |||| || || ||||| ||| Sbjct 301411 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 301352 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || | |||| || || ||||||||||| ||||| || || || || Sbjct 301351 TGACACCATTGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 301292 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | | || ||||| || ||||| | || ||| |||||| | || || ||||| Sbjct 301291 GCAGAGGTTGATCTTTGCTGGGAAACAACTGGAAGATGGGCGCACCCTGTCTGACTACAA 301232 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| || ||||| || || | || ||||| |||| ||| | |||||| Sbjct 301231 CATCCAGAAAGAGTCAACTCTGCACTTAGTCCTGCGCTTGAGGGGAGGT 301183 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | || || || || |||| || || ||||| ||| Sbjct 301639 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 301580 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || | |||| || || ||||||||||| ||||| || || || || Sbjct 301579 TGACACCATTGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 301520 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | | || |||||||| |||||| | || ||| ||| || | ||||| ||||| Sbjct 301519 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCCCCCTGTCCGACTACAA 301460 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| || || || |||||| Sbjct 301459 CATCCAGAAGGAGTCCACC 301441 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | || || || || |||| || || ||||| ||| Sbjct 301867 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 301808 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || | |||| || || ||||||||||| ||||| || || || || Sbjct 301807 TGACACCATTGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 301748 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | | || |||||||| |||||| | || ||| ||| || | ||||| ||||| Sbjct 301747 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCCCCCTGTCCGACTACAA 301688 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| || || || |||||| Sbjct 301687 CATCCAGAAGGAGTCCACC 301669 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | || || || || |||| || || ||||| ||| Sbjct 302095 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 302036 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || | |||| || || ||||||||||| ||||| || || || || Sbjct 302035 TGACACCATTGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 301976 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | | || |||||||| |||||| | || ||| ||| || | ||||| ||||| Sbjct 301975 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCCCCCTGTCCGACTACAA 301916 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| || || || |||||| Sbjct 301915 CATCCAGAAGGAGTCCACC 301897 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | || || || || |||| || || ||||| ||| Sbjct 302323 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 302264 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || | |||| || || ||||||||||| ||||| || || || || Sbjct 302263 TGACACCATTGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 302204 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | | || |||||||| |||||| | || ||| ||| || | ||||| ||||| Sbjct 302203 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCCCCCTGTCCGACTACAA 302144 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| || || || |||||| Sbjct 302143 CATCCAGAAGGAGTCCACC 302125 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | || || || || |||| || || ||||| ||| Sbjct 302551 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 302492 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || | |||| || || ||||||||||| ||||| || || || || Sbjct 302491 TGACACCATTGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 302432 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | | || |||||||| |||||| | || ||| ||| || | ||||| ||||| Sbjct 302431 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCCCCCTGTCCGACTACAA 302372 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| || || || |||||| Sbjct 302371 CATCCAGAAGGAGTCCACC 302353 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || |||| || || || |||| || || || || ||| Sbjct 302778 ATGCAGATCTTCGTAAAGACCCTAACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 302719 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || || ||||||||||| ||||| || || || || Sbjct 302718 GACACCATTGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCAG 302659 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| |||||| | || ||| ||| || | ||||| |||||| Sbjct 302658 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCCCCCTGTCCGACTACAAC 302599 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 302598 ATCCAGAAGGAGTCCACC 302581 >seq183 Length=6694209 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| |||||||| ||||| | || || || || ||||||| |||| ||| | Sbjct 3138965 AAGATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTCAAAGTTGAACCA 3138906 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | |||| | || || | |||| ||||| || || ||||| | ||||| || ||| Sbjct 3138905 TCATATACAATAGAAAATGTAAAACTCAAAATACAGGATAAGGAATGAATTCCTCCTGAT 3138846 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | || | ||||| ||||||||||| || ||| | || | || || ||| Sbjct 3138845 CAGAAAAGACTGACTTTTGCTGGCAAACAGTTGGAAGATGGGTGTACTTTGTCTGACTAC 3138786 Query 22396 AACATTCAAAAAGAATCCA 22414 ||||| |||| || |||| Sbjct 3138785 AACATCAAAAAGGAGTCCA 3138767 >seq46174 Length=2177 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| | ||||| | || || || || | || || || || ||| | Sbjct 1728 AAGATGCAGATTTTCATAAAAACCCTCACAGGGAAGACCATTACCCTCGAGGTTGAACCG 1787 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | ||| ||||| || || ||||| || || || ||| Sbjct 1788 TCAGATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGG----CCTCCTGAT 1843 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||||| ||||||||||| || ||| || || | || || ||| Sbjct 1844 CAGCAAAGACTGATTTTTGCTGGCAAACAGTTGGAAGATGGGCGTACTTTGTCTGACTAC 1903 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || ||||| | ||| | || ||| || | || || ||| Sbjct 1904 AACATCCAAAAGGAGTCCACGCTTCATCTTGTGTTGAGACTCCGTGGTGGT 1954 >seq5 Length=157846 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| | ||||| | || || || || | || || || || ||| | Sbjct 1047 AAGATGCAGATTTTCATAAAAACCCTCACAGGGAAGACCATTACCCTCGAGGTTGAACCG 1106 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | ||| ||||| || || ||||| || || || ||| Sbjct 1107 TCAGATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGG----CCTCCTGAT 1162 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||||| ||||||||||| || ||| || || | || || ||| Sbjct 1163 CAGCAAAGACTGATTTTTGCTGGCAAACAGTTGGAAGATGGGCGTACTTTGTCTGACTAC 1222 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || ||||| | ||| | || ||| || | || || ||| Sbjct 1223 AACATCCAAAAGGAGTCCACGCTTCATCTTGTGTTGAGACTCCGTGGTGGT 1273 >seq436 Length=2687165 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || ||||| || ||||| || ||| | || || || || |||| || || |||||| Sbjct 806825 GTCAAAATGCAGATCTTTGTGAAGACTCTCACTGGCAAGACCATCACCCTCGAGGTGGAA 806766 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 ||| || ||| | || || | || || || || || || || || || || || Sbjct 806765 CCCAGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCT 806706 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || || | || || ||||| ||||| ||| | || ||| |||||| | || || Sbjct 806705 GACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGAC 806646 Query 22393 TACAACATTCAAAAAGAATCCAC 22415 ||||||||||| ||||| || || Sbjct 806645 TACAACATTCAGAAAGAGTCTAC 806623 >seq50077 Length=1687503 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || |||| | || || || || |||| || | || ||| | Sbjct 738360 AAGATGCAGATTTTCGTAAAAATCCTCACAGGGAAGACCATCACCCTCAAGGTTGAACCG 738301 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | ||| ||||| || || ||||| || ||||| || ||| Sbjct 738300 TCGGATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGAT 738241 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||| | ||||||||||| | ||| | | | || || ||| Sbjct 738240 CAGCAAAGACTGATTTTTTCTGGCAAACAGTTGAAAGATGGGCATGCTTTGTCTGACTAC 738181 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || ||| | | ||| | || ||| || | || || ||| Sbjct 738180 AACATCCAAAAGGAGTCCCCGCTTCATCTTGTGTTGAGACTTCGTGGTGGT 738130 >seq250 Length=3593377 Score = 82.4 bits (90), Expect = 6e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 22321 GGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGC 22380 || || || ||||| || || ||||| |||||||||||||||||||| |||||| |||| Sbjct 1643156 GGCATCCCCCCCGACCAGCAGCGTCTGATATTTGCCGGCAAACAGTTGGAGGATGGCCGC 1643097 Query 22381 ACCGTCTCCGATTACAACATTCAAAAAG 22408 || | || || |||||||| || |||| Sbjct 1643096 ACGCTGTCTGACTACAACATCCAGAAAG 1643069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419468391673750