Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq75 84.2 4e-11 >seq75 Length=11204613 Score = 84.2 bits (92), Expect = 4e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767 ||||||||| | || || || || |||||||| || ||| | || || || || |||||| Sbjct 8448343 GTAGCCTTTGCAGCAGTAGAAGGAATCTTCTTTTCTGGCTCGTTTGCATCAATATTCTGG 8448284 Query 42768 CTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826 |||||| | ||| | ||||||||| ||||| || || || ||||| || ||||| || Sbjct 8448283 CTCAAGAAACGAGGACT-GATGCCCGGCCTCACATTTTCTAATGAACTGATTAGCAGAGA 8448225 Query 42827 CGAGG 42831 |||| Sbjct 8448224 TGAGG 8448220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943740134820000