Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq48034 181 8e-40 seq133 178 1e-38 seq295 159 3e-33 seq190 150 1e-30 seq45343 145 6e-29 seq246 132 4e-25 seq560 113 3e-19 seq299 104 2e-16 seq47388 102 6e-16 seq47081 96.9 3e-14 seq663 95.1 9e-14 seq44580 91.5 1e-12 seq716 86.0 5e-11 >seq48034 Length=1339188 Score = 181 bits (200), Expect = 8e-40 Identities = 724/1123 (64%), Gaps = 25/1123 (2%) Strand=Plus/Minus Query 517592 ATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTT 517651 || ||||| || | ||| |||||||| |||||||| |||||||| || | | | | | Sbjct 640915 ATGGCTGCCTGGACAGCTGCACCATAAGCAACAGCCTCATCAGGGTTGATGCTCTTACTC 640856 Query 517652 AGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGA 517710 |||| || ||||||||||| | | || || | ||| | ||| || | || || || Sbjct 640855 AGTTCCTTCCCATTGAAAAAGTCTTGTAGCAGCT-TCTGAATCTTGGGGACACAAGTAGA 640797 Query 517711 TCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAAC 517770 || || || | ||||| ||||| | |||||| ||||| ||| | | ||| | | | Sbjct 640796 GCCACCCACCAGGACAATGTCATGGATCTGTGACTTATCTAGTCTGGCGTCCCGAAGAGC 640737 Query 517771 TTTTTCAAC-GGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAG 517829 ||| || || |||| || | ||| | |||| ||||| | | ||||| ||| | Sbjct 640736 TTTCTCTACAGGGTCCAGGGTCCGA-CGGAACAGGTCTGCATTCAACTCTTCAAATCGGG 640678 Query 517830 CTCTAG-TAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA 517888 | || ||| | | || |||| |||||||| | | || || | ||||| | Sbjct 640677 CAACAGGTAATGGAGGTATAGAAATCGATTCCTTCATAGAGGGAGTCGATCTCAATACTG 640618 Query 517889 GTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGT 517948 | ||| || || || | | | ||||| |||||||| || || | || | || Sbjct 640617 GCTTGGGTGCTGGAGGAGTGGGTGTGCTTAGCCCGTTCACAAGCAGTGCGAAGGCGGCGG 640558 Query 517949 AAGGCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCT-CTTGAAATCTTCAACACA 518007 | ||| | ||| ||| | ||| | | | || | |||||| ||| ||| | Sbjct 640557 ACAGCTCTC-----TTG-TTCTCA-CTGATGTCCTTCTTATGCTTGAA--CTTAAACTCG 640507 Query 518008 CC-ATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAG 518066 | ||| || | ||||| | || ||||| | ||||| | |||| ||| | |||| Sbjct 640506 GCGATG--ACCATGCGATTGTTGAAGTCTTCTCTGCCCAAGTGCGTATCTCCAGCTGTAG 640449 Query 518067 CTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCAC 518126 ||| || | ||| ||||| |||| || | | | |||||| || ||||| | Sbjct 640448 ATCTGACCTCAAAACTCCCATCCTCAATAGTGAGGATGGACACATCAAAAGTACCACCTC 640389 Query 518127 CCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAA 518186 ||| | || ||||| || || |||| | ||||| || ||||| || |||| Sbjct 640388 CCAAGTTGAAGATAAGCACGTTTCTTTCAGCTCCAACCTTTTTGTCTAGACCGTAGGCAA 640329 Query 518187 AAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTG 518246 | ||||||||||| || || || || || | ||||| |||||||| || | | | Sbjct 640328 TGGTGGCAGCAGTTGGCTCGTTGATGATCCTAAGCACATTGAGACCAGCGATAGTCCTAG 640269 Query 518247 CATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306 ||||||| || ||||| | || || || | ||||| || || ||||||| || |||| Sbjct 640268 CATCTTTGGTAGCTTGACACTGAGAGTCACTGAAATAAGCCGGCACAGTAACCACAGCAT 640209 Query 518307 CAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTG 518366 || || || |||| ||||| ||| ||| ||||| || | | || ||| | Sbjct 640208 TGGTAACAGTCTTCCCAAGGTAAGCTTCTGCAATTTCCTTCATCTTGGTCAGAACCATAG 640149 Query 518367 ATGAAATTTGTTCTGGG--GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATA 518424 |||| | | |||||| ||| |||| | ||||| ||| |||| | | Sbjct 640148 ATGACACCTCCTCTGGGTTGAA----ACTTGTCTCTCTTTTG-TATTCCACTTGCACCTT 640094 Query 518425 TGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACT 518484 || | || |||| | || | || ||||||| ||||| || || || ||| Sbjct 640093 GGGCCTGCCTGCATCATTCACCACCATGAAGGGCCAGTGCTTCATGTCAGACTGGACAAC 640034 Query 518485 TTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATT 518544 |||| ||| | ||||| | | || |||||||||| || ||||| || || Sbjct 640033 AGCATCATCAAACCTGCGTCCAATCAGATGCTTGGCATCAAAAACTGTGTTGGTGGGGTT 639974 Query 518545 AATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAAC 518604 | |||| | |||| ||| || ||||| |||||||| |||| || || ||||| | || Sbjct 639973 CACTGCAACCTGATTTTTTGCAGCATCACCAATCAGTCGTTCAGTGTCAGTAAAGGTGAC 639914 Query 518605 ATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTG 518664 ||| |||||| || | || || ||||| || ||||| || || ||||| |||| || Sbjct 639913 ATAACTTGGAGTGGTTCTGTTCCCCTGATCGTTAGCAATTATCTCTACTTTTCCATGCTG 639854 Query 518665 CCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCA 518707 | ||||| || || | || || || | |||||| ||| Sbjct 639853 GAAGACACCCACGCAGGAGTAGGTGGTGCCGAGATCAATGCCA 639811 >seq133 Length=10473765 Score = 178 bits (196), Expect = 1e-38 Identities = 422/636 (66%), Gaps = 4/636 (1%) Strand=Plus/Minus Query 518022 GATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA 518081 |||| || |||||||| | ||||| | |||| ||| | ||| | | || | ||| Sbjct 9784886 GATTGTCGAAATCTTCTCTGCCCAAGTGTGTATCTCCAGCTATAGATTTGACCTCAGAAA 9784827 Query 518082 GTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAA 518141 |||||| |||| || | | | |||||| || ||||| |||| ||||| || | Sbjct 9784826 TTCCATCCTCAATAGTGAGGATGGACACATCAAAAGTGCCACCTCCCAAGTCAAAGATCA 9784767 Query 518142 GTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201 | ||||| |||| | ||||| || ||||| || |||| ||||||||||||| Sbjct 9784766 GCACATTTCTTTCAGCTCCAACCTTTTTGTCTAGACCGTAGGCAATGGCAGCAGCAGTTG 9784707 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 | || || ||||| || | ||||| |||||||| || | || |||||||| || |||| Sbjct 9784706 GCTCGTTGATAATCCTAAGCACATTGAGACCAGCGATAGTCCCGGCATCTTTGGTAGCTT 9784647 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTAC 518321 | || || || || ||||| ||||| ||||||| || |||| || || || | Sbjct 9784646 GATGCTGAGAGTCATTGAAATAAGCAGGCACAGTAACCACAGCATTGGTAACAGTCTTCC 9784587 Query 518322 CAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 518381 ||| ||||| ||| ||| ||||| || | || ||| ||||| | | |||| Sbjct 9784586 CAAGTTAAGCTTCTGCAATTTCCTTCATCTTGGCCAGAACCATAGATGATACCTCCTCTG 9784527 Query 518382 GG--GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAAC 518439 || ||| || |||| || || ||| ||||| | | || | | Sbjct 9784526 GGTAGAAACTT--TTGGTCTCTCCTTTGTATTCTACTTGCACCTTGGGCCTGCCTGTGTC 9784469 Query 518440 ATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATC 518499 ||| | || | || ||||||| ||||| || || || ||| |||| ||| Sbjct 9784468 ATTCACCACCATGAAGGGCCAGTGCTTCATGTCAGACTGGACAACAACATCATCAAACCT 9784409 Query 518500 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATA 518559 | ||||| | || || ||||| |||| |||||||| || || |||||| | |||| Sbjct 9784408 GCGTCCAATGAGACGCTTGGCATCGAAAACTGTATTGGTGGGGTTCATTGCAACCTGATT 9784349 Query 518560 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 518619 ||| || | ||| || ||||| |||| || || ||||| | ||||| |||||| || Sbjct 9784348 TTTTGCAGAATCACCGATCAGTCGTTCGGTGTCAGTAAAGGCGACATAGCTTGGAGTGGT 9784289 Query 518620 GCGATTACCTTGATCATTCGCAATAATTTCAACTTT 518655 | || || ||||| || ||||| || || ||||| Sbjct 9784288 TCTGTTCCCCTGATCGTTGGCAATTATCTCTACTTT 9784253 >seq295 Length=1302164 Score = 159 bits (176), Expect = 3e-33 Identities = 467/708 (66%), Gaps = 31/708 (4%) Strand=Plus/Plus Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080 ||||| ||||| ||||| || ||||| | |||| ||| | |||| | | || | ||| Sbjct 110505 CGATTGTCAAAGTCTTCTCCACCCAAGTGTGTATCTCCAGCTGTAGATTTGACCTCAAAA 110564 Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140 | |||||| |||| || | | | |||||| || | || |||| ||| || || Sbjct 110565 ACTCCATCCTCAATAGTGAGGATGGACACATCAAAAGTGCTACTTCCCAAATCGAAGATC 110624 Query 518141 AGTACATTCATTTCTTTGTCTTGG---TTTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197 || ||||| ||| || || ||||| |||| |||||| ||| ||||||||| Sbjct 110625 AGCACATT--TTTTTTCAGCTCCAACCTTTTTGTCAAAACCATAGACAATGGCAGCAGCA 110682 Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257 |||||||||| || || || | ||||| ||||||||||| |||| |||||||| || Sbjct 110683 ATTGGTTCATTGATGATCCTAAGCACATTGAGACCAGCAATAGTTCCAGCATCTTTGGTA 110742 Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCT 518317 || || || || || |||||||| || | |||||||| || |||| || || Sbjct 110743 GCCTGATGCTGAGAGTCATTAAAATAAGCCAGCACAGTAATCACAGCATTGGTAACAGTC 110802 Query 518318 TTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 518377 || |||| ||| || ||| ||| |||| | | | || ||| ||||| | || Sbjct 110803 TTCCCAAGATAGGCTTCTGCAATTTCCTTCACCATGGTCAGAACCATAGATGACACTTCC 110862 Query 518378 TCTGGGGA-ATATTGCTTGGAT-TCATTTTGATATGATACTT-----CAAAATATG---G 518427 |||||| | | ||| ||| | |||||| ||| ||||| | || || | Sbjct 110863 TCTGGGTAGAAATTTTTTGTCTGTCATTT--GTATTCTACTTGCACCCGAAGCCTGCCTG 110920 Query 518428 T-TTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTT 518486 | | ||| || ||| | | || ||||||| |||||||| || || ||| Sbjct 110921 TGTCATT--CACCATCA-------TGAAGGGCCAGTGCTTCATATCAGACTGGACAACAG 110971 Query 518487 GGTCATTAAAATCT-CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTA 518545 ||| | | |||| | ||||| | | || |||| |||| | | ||||| || || Sbjct 110972 CATCA-TCAGATCTGCATCCAATCAGATGCTTGGCATTAAAA--ACTGTTGGTGGGGTTC 111028 Query 518546 ATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACA 518605 ||| || | |||| || | ||||| | | || ||| || || ||||| | |||| Sbjct 111029 ATTACAACCTGATTCTTTGTAGCATCATCCACCACTCATTCGGTATCGGTAAAGGCAACA 111088 Query 518606 TATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGC 518665 || ||||| || | || || |||||||| ||||| || || ||||| |||| | Sbjct 111089 TAGCTTGGAGCGGTTCTGTTCCCCTGATCATTGGCAATTATCTCTACTTTTCCATGCTAG 111148 Query 518666 CATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 518713 | ||||| ||||| | || || || | |||||| ||||| ||| Sbjct 111149 AAGACACCCACACAGGAGTAGGTGGTACCAAGATCAATGCCAATTGCA 111196 >seq190 Length=19269909 Score = 150 bits (166), Expect = 1e-30 Identities = 458/695 (66%), Gaps = 16/695 (2%) Strand=Plus/Minus Query 518022 GATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA 518081 |||| ||||| ||||| || ||||| | || | ||| | |||| | | || | |||| Sbjct 18906616 GATTGTCAAAGTCTTCTCCGCCCAAGTGTGTCTCTCCAGCTGTAGATATGACCTCAAAAA 18906557 Query 518082 GTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAA 518141 |||||| |||| || | | | ||||||| || | ||| |||| | || | | | Sbjct 18906556 TTCCATCCTCAACAGTGAGGATGGATACATCAAAAGTGCTACCTCCCAAGTTAAGA-TCA 18906498 Query 518142 GTACATTCATTTCTTTGTCTTGG---TTTTTATCAAGACCATACGCAAAAGCAGCAGCAG 518198 ||||||| |||| || | |||||||| | |||||| |||| | ||| ||||| Sbjct 18906497 GTACATTTCTTTCAG---CTCGAAACTTTTTATCTAAACCATAGGCAATAACAGGAGCAG 18906441 Query 518199 TTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 518258 |||| ||||| |||| || || ||||| ||||||||||| |||| |||||||| || | Sbjct 18906440 TTGGCTCATTGGTAATCCTAAATACATTGAGACCAGCAATAGTTCCAGCATCTTTGGTAG 18906381 Query 518259 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTT 518318 | || | || || || | |||||| || | |||| || | | ||| || || | Sbjct 18906380 CCTGATTCTGAGAGTCATAAAAATAAGCCAGTACAGCAACCATGACATTGGTAACAGTCT 18906321 Query 518319 TACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 518378 | |||| ||| || || ||| ||||| || | | || ||| ||||| | | | Sbjct 18906320 TCCCAAGATAGGCTTCTGTAATTTCCTTCATCTTGGTCAGAACCATAGATGACACCTCCT 18906261 Query 518379 CTGGGGA-ATATTGCTTGGAT-TCATTTTGATATGATACTTCAAAATATGGTTTATTACC 518436 || || | | | | ||| | || |||| ||| ||||| | || || | | Sbjct 18906260 CTAGGTAGAAACTTTTTGTCTCTCCTTTT--TATTCTACTTGCACATTGGGCCTGCCTGC 18906203 Query 518437 AACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAA 518496 | | || | || | || || |||| || ||||| | || ||| || | || Sbjct 18906202 ATCGTTCACCACCATGAAGGGTCAGTGCTTTATATCATACTGGACAACAACAACA-TCAA 18906144 Query 518497 ATCTCT-ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTT 518555 |||| | | ||| || | || || ||||||| || ||||| || || |||||| ||| Sbjct 18906143 ATCTGTGTCTAATCAAATGCTTGGCGTCAAAAACTGTGTTGGTGGGGTTCATTGCAACTT 18906084 Query 518556 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAG 518615 ||| ||| | || || ||||||| || || || ||||| | |||||| ||||| Sbjct 18906083 GATTTTTTGTAGCGTCACCAATCA-TCATTTGGTATCAGTAAAGGTAACATAGCTTGGAG 18906025 Query 518616 T-TGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCT 518674 | || | || || |||| || ||||| || || ||||| | | || | ||||| Sbjct 18906024 TGGGTTTGGTTCCCCTGATTGTTGGCAATTATCTCTACTTTTCTGTGCTGGAAGACACCC 18905965 Query 518675 ACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 518709 |||||| | ||| | |||| |||||| ||||| Sbjct 18905964 ACACAA-GAGTAGTGGCACCTAGATCAATGCCAAT 18905931 >seq45343 Length=1564474 Score = 145 bits (160), Expect = 6e-29 Identities = 363/546 (66%), Gaps = 9/546 (2%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || ||||| || |||| ||||||||||| || | || || || || | ||| Sbjct 898579 TTTTTGTCTAGACCGTAGGCAATGGCAGCAGCAGTCGGCTAGTTGATGATCCTAAGCACA 898520 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || |||||||| || | || |||||||| || ||||| | || || || || ||||| Sbjct 898519 TTGAGACCAGCGATAGTCCCAGCATCTTTGGTAGCTTGACGCTGAGAGTCATTGAAATAA 898460 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTAC-TTCTTTACCAATATAAGCGCTTGCCGTTTG 518343 || | ||| ||| || |||| || || ||||| |||| |||| ||| ||| Sbjct 898459 GCCAGCACATTAACCACAGCATTGGTAACAGTCTTT-CCAAGGCAAGC---TGCAATTTC 898404 Query 518344 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG--GAATATTGCTTGGATTCA 518401 ||||| || | | || ||||||||| | | |||||| ||| || |||| || Sbjct 898403 CTTCATCTTGGTCAGAACCATTGATGACACCTCCTCTGGGTAGAAACTT--TTGGTCTCT 898346 Query 518402 TTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAG 518461 || ||| |||| | | || | || |||| | || | || |||||| Sbjct 898345 CCTTTGTATTCCACTTGCACCTTGGGCCTGCCTGCATCATTCACTACCATGAAGGGCCAG 898286 Query 518462 TATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCA 518521 | ||||| || || || ||| |||| ||| | | ||| | | || ||| Sbjct 898285 TGCTTCATGTCAGACTGGACAACAGCATCATCAAACCTGCGTCTAATCAGATGCTTGGCA 898226 Query 518522 TCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGA 518581 ||||||| || ||||| ||||| |||| | |||| ||| || ||||| |||||||| Sbjct 898225 TCAAAAACTGTGTTGGTGGGATTCATTGTAATCTGATTTTTTGCAGCATCACCAATCAGT 898166 Query 518582 TGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCA 518641 || | || || ||||| | || ||| |||||| || | || || ||||| || ||| Sbjct 898165 CGTCCGGTGTCAGTAAAGGCAATATAGCTTGGAGTGGTTCTGTTCCCCTGATCGTTGGCA 898106 Query 518642 ATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCA 518701 || || || ||||| |||| || | ||||| ||||| | || || || | |||| Sbjct 898105 ATTATCTCTACTTTTCCATGCTGGAAGACACCCACACAGGAGTAGGTGGTGCCGAGATCA 898046 Query 518702 ATACCA 518707 || ||| Sbjct 898045 ATGCCA 898040 >seq246 Length=8872645 Score = 132 bits (146), Expect = 4e-25 Identities = 454/697 (65%), Gaps = 22/697 (3%) Strand=Plus/Minus Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086 ||||| ||||| || |||| | |||| ||| | |||| ||| || | |||| |||| Sbjct 3045358 TCAAAGTCTTCTCCATCCAAGTGTGTATATCCAGCTGTAGATCTGACCTCAAAAATTCCA 3045299 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG--TA 518144 || |||| || | | || ||| ||| || ||||| ||| | |||||| || | Sbjct 3045298 TCGTCAATAGTGAGGATAGATACCTCAAAAGTGCCACCTTCCAAGTAAAAAATCAGGTTT 3045239 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 | |||| || |||| | | || | || || ||| ||||||||||||||| | Sbjct 3045238 CTTTCAGCTCCAA-TCTT----TCTGTCTAAACGGTAGACAATAGCAGCAGCAGTTGGCT 3045184 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 ||| ||| || | ||||| ||||||||||| |||| |||||||| || | || | Sbjct 3045183 CATGGTTAACACTAAGCACATTGAGACCAGCAATGGTTCCAGCATCTTTGGTAGTCTGAC 3045124 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 | || || || |||||||| || | ||||||| ||||||| | || || ||| Sbjct 3045123 TCTGAGAGTCATTAAAATAAGCTGACACAGTAACCACGGCATTGCTAACAGTCTTCCCAT 3045064 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384 || || || ||| |||||| | | | || ||| |||| || | | ||| Sbjct 3045063 GGTAGGCTTCTGAGATTTCTTTCATCTCGGTCAGAACCATAAATGACATCTCCTTTGGAC 3045004 Query 518385 A-ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 518443 | | | | ||| | |||| ||| ||||| | | || | | || | || Sbjct 3045003 AGAAACTTTTTGTCTCTCCTTTG-TATTCTACTTGTATCTTGGGACTGTCTGCATCGTTC 3044945 Query 518444 ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 518503 | || | || ||||||| |||||||| || || ||| ||| | |||||| || Sbjct 3044944 ACCACCATGAAAGGCCAGTGCTTCATATCAGACTGGACAACAGCATCA-TCAAATCTGTA 3044886 Query 518504 -CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTT 518562 ||||| | | || |||||||||| |||||||| || || |||||| | |||| ||| Sbjct 3044885 TCCAATCAGACACTTGGCATCAAAAACTGTATTGGTGGGGTTCATTGCAACCTGAT-TTT 3044827 Query 518563 GGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATA---TGATGGAGTTGT 518619 || |||| |||||| |||| || || | || | ||||| || | |||| Sbjct 3044826 TGCAACATCACCAATC----GTTCGGTATCAGGTAAGGTGACATAGCTTGTTACAGTT-- 3044773 Query 518620 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 || || | |||||||| ||||| || | ||||| ||| || | | || ||||| Sbjct 3044772 -CGGTTCTCCTGATCATTGGCAATTATCTTTACTTTTACATGCTGGAAGATACTCACACA 3044714 Query 518680 ACTAAAAGTTGTTCCTAAATCAATACCAATAGCAATT 518716 | | || || |||| |||||| |||| ||| || Sbjct 3044713 AGAGTAGGTGGTACCTAGATCAATGCCAACTGCAGTT 3044677 >seq560 Length=4172644 Score = 113 bits (124), Expect = 3e-19 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 635439 AATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTA 635498 ||||||| || || |||| |||||||| ||||| ||||| || ||| | || |||||| Sbjct 1783216 AATGTACGCTCATCCTGACTGAGGGAGACTCAGCCAAAACTTTGGCTGTTTCAGGTCTTG 1783157 Query 635499 ATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTA 635558 ||| |||| |||||| | |||||||||||||| |||||||||||| | | |||||| Sbjct 1783156 GTGTGGTTGGTAGAGATAAATATGGAGTTTTCCCTCTTAGAGGAAAAATACTCAATGTTC 1783097 Query 635559 GGGATGCTAGTCCTaaa 635575 | || ||| || |||| Sbjct 1783096 GAGAAGCTTCTCATAAA 1783080 >seq299 Length=5035708 Score = 104 bits (114), Expect = 2e-16 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || ||||| || |||| ||||||||||| || || || ||||| || | ||| Sbjct 3422889 TTTTTGTCTAGACCGTAGGCAATGGCAGCAGCAGTCGGCTCGTTGATAATCCTAAGCACA 3422948 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || |||||||| || | || |||||||| || ||||| | || || ||||| ||||| Sbjct 3422949 TTGAGACCAGCGATAGTCCCAGCATCTTTGGTAGCTTGACGCTGAGAGTCGTTGAAATAA 3423008 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 || || ||||||| || |||| Sbjct 3423009 GCTGGCACAGTAACCACAGCAT 3423030 >seq47388 Length=1147945 Score = 102 bits (112), Expect = 6e-16 Identities = 190/278 (68%), Gaps = 1/278 (0%) Strand=Plus/Plus Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080 ||||| |||| ||||| || ||||| | |||| ||| | |||| | | | | ||| Sbjct 607294 CGATTGCCAAAGTCTTCTCCGCCCAAGTGTGTATCTCCAGCTGTAGATTTGATCTCAAAA 607353 Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140 | |||||| || | || | | | |||||| || ||||| |||| | || || Sbjct 607354 ATTCCATCCTCCATAGTGAGGATGGACACATCAAACGTGCCACCTCCCAAGTGGAAGATC 607413 Query 518141 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 518200 || ||||| |||| | ||||| || | |||||| |||| |||||||||||| Sbjct 607414 AGCACATTTCTTTCAGCTCCAACCTTTTTGTCTAAACCATAGGCAATGGCAGCAGCAGTT 607473 Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260 || ||||| || || || | |||| ||||||||| | |||| |||||||| || || Sbjct 607474 GGCTCATTGATGATCCTAAGCACATAGAGACCAGCATTAGTTCCAGCATCTTTGGTAGCC 607533 Query 518261 TGTCTTTGTGAATCGTT-AAAATATGCAGGAACAGTAA 518297 | || || || || |||||| || || ||||||| Sbjct 607534 GGATGCTGAGAGTCATTAAAAATAAGCTGGCACAGTAA 607571 >seq47081 Length=2077456 Score = 96.9 bits (106), Expect = 3e-14 Identities = 351/542 (65%), Gaps = 13/542 (2%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || || |||| |||| ||||| ||||||| ||||| ||||| || | ||| Sbjct 1900293 TTTTTGTCTAGTGCATAGGCAATCGCAGCCTCAGTTGGCTCATTGATAATCCTAAGCACA 1900234 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 | |||||||||| |||| ||| |||| || || || | | || || ||||||||| Sbjct 1900233 CTGGGACCAGCAATGCTTCTAGCAACTTTGGTAGCCTGACACAGAGAGTCATTAAAATAT 1900174 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344 || | |||||||| ||||| ||| || || |||| || || | ||| ||| Sbjct 1900173 GCTGTCACAGTAATCTTGGCATTAGTAACAGTCTTCCCAAGGTAGGCTCCTGCGATTTTC 1900114 Query 518345 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG--GAATATTGCTTGGATTCAT 518402 ||||| || | | | || ||||| | | |||||| ||| || || | || Sbjct 1900113 TTCATCTTGGTCAGTACCACAGATGACACCTCCTCTGGGTAGAAAGTT--TTAGTCTCTC 1900056 Query 518403 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGT 518462 | ||| ||||| | | || | | |||| | || | || | ||||| Sbjct 1900055 CTCTGTATTTTACTTGCACCTTGGGCATGCCTGCCTCATTCACCACCATGAAGGTCCAGT 1899996 Query 518463 ATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT-ACCAATTAATCGTTTTGCA 518521 |||||||| || || ||| ||| | |||||| | ||||| | || ||| Sbjct 1899995 GCTTCATATCAGACTGGACAACAGCATCA-TCAAATCTATGTCCAATCAGATACTTAGCA 1899937 Query 518522 TCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGA 518581 ||||||| || || || || || |||||| | |||| ||| || ||||| |||| Sbjct 1899936 TCAAAAACTGTGTTAGTGGGGTTCATTGCAACCTGAT-TTTTGCAGCATCAATGATCAAC 1899878 Query 518582 TGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCA 518641 ||| ||| | ||||| | ||| ||||||| || ||| |||| |||||| || Sbjct 1899877 AGTTTTGTATTGGTAAAGGCAAC-----ATGGAGTGGT-TTATTTCCTTTATCATTAACA 1899824 Query 518642 ATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCA 518701 | | |||||||| | | | | ||||| || ||| | ||| || || |||||| Sbjct 1899823 GTTGTCTCAACTTTTCTGTGCTCGAAAACACCCACGCAAGCATCAGTGGTACCAAAATCA 1899764 Query 518702 AT 518703 || Sbjct 1899763 AT 1899762 >seq663 Length=3437288 Score = 95.1 bits (104), Expect = 9e-14 Identities = 196/290 (68%), Gaps = 14/290 (5%) Strand=Plus/Plus Query 517098 TTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCTGCTTCTTCAAATT 517157 |||| || |||||| | | ||||| | | || ||| || ||| | || |||| | Sbjct 2897563 TTTCCAACTCATTTCTGGTATCAATACGCTCCTTGAGCTTTTTGTCTTCCTCGGCAAACT 2897622 Query 517158 CTTTAGCTTCTCTAATCATTCTCTCAATTTGATCT----TCAGAGAATCTTCCGCGATTA 517213 | ||| || ||| ||| || ||||||| ||| |||| || || | | | Sbjct 2897623 TCTCAGCATCATTAACCATCCTTTCAATTTCTTCTGGTGTCAGGCGATTTT----GGTCA 2897678 Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTT---TGTTGATTTATCAGCGGCAGTCACATTA 517270 || ||||| || || || || |||||| ||| || || |||| ||||| | Sbjct 2897679 TTGGTAATTGTGATCTTATT---TTTGTTCCCTGTACCCTTGTCTTCGGCTGTCACTCGA 2897735 Query 517271 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 517330 ||||| ||||| |||| | ||||||||||||||||| |||||||| || | ||||| Sbjct 2897736 AGAATGCCATTTACATCTATCTCAAATGTGACTTCAATCTGAGGGACTCCGCGGGGAGCA 2897795 Query 517331 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGT 517380 || || || || || || |||||||||||| | ||||||||| || Sbjct 2897796 GGAGGAATTCCAGTCAGATCGAATGTTCCCAGAAGGTGATTATCTTTTGT 2897845 >seq44580 Length=1790556 Score = 91.5 bits (100), Expect = 1e-12 Identities = 218/328 (66%), Gaps = 9/328 (3%) Strand=Plus/Minus Query 635442 GTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAATG 635501 |||| || || |||| |||||||| | | || ||| || | | | || ||| | | || Sbjct 1368970 GTACACTCATCCTGACTGAGGGAGACTGACCTGAAAATTTGGTTGTTTCAGGTGTCAGTG 1368911 Query 635502 TTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGG 635561 | |||| |||||| | |||||||||||||| ||| ||| |||| | | | |||| | | Sbjct 1368910 TGGTTGGTAGAGATAAATATGGAGTTTTCCCTCTTCGAGAAAAAATACTCAGTGTTTGAG 1368851 Query 635562 ATGCTAGTCCTaaaaaaaTTGCTGATAATGAGGAAATTACAGCAATCaaaaaaaTTGTTG 635621 | ||| | |||| | || | || |||| |||||| |||| || ||||| | Sbjct 1368850 AAGCTTCTTATAAACAGATCACGGAAAATGCCAAAATTAACAATATCATCAAGATTGTGG 1368791 Query 635622 GACTT--GAACAAGGAAAAGT-TTATGATGA------TCTCAAAGGTTTACGATATGGTA 635672 | ||| | ||||| |||| | | ||||||| || || ||| | ||||| | Sbjct 1368790 GTCTTCAGTACAAGAAAAACTATGATGATGAAGATTCACTGAAGACTTTTTGCTATGGGA 1368731 Query 635673 GTATTATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCATGA 635732 || |||||| | ||||| || || | | |||||||||||| || | || | Sbjct 1368730 AGATAATGATTATGATAGATCAGGACCAAGACAGATCCCATATCAAAGGCTTGCTGATTA 1368671 Query 635733 ATTTTATCCATTGTTTTTGGCCATCTCT 635760 | |||| |||| |||||| ||||| Sbjct 1368670 ACTTTACCCATCAAAATTGGCCCTCTCT 1368643 >seq716 Length=11497392 Score = 86.0 bits (94), Expect = 5e-11 Identities = 124/173 (72%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 518083 TCCATCTTCA--AGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140 |||||| ||| ||||| |||||| |||||| || ||||| |||| |||||||| Sbjct 8900385 TCCATCCTCAGTAGAGAGAAAAGAC--ACATCAAAAGTGCCACCTCCCAAGTCAAAAATC 8900328 Query 518141 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 518200 | | || |||| | ||||| || | ||||| | || |||| |||||||| Sbjct 8900327 AAGATGTTTCTTTCAGCTCCAACTTTTTTGTCTAAGCCATAGGTAATAGCAACAGCAGTT 8900268 Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTT 518253 || |||||||||||||| | |||| ||| ||||||| ||| |||||||| Sbjct 8900267 GGCTCATTAATAATTCTAAGCTCATTGAGATCAGCAATAGTTCAAGCATCTTT 8900215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3778304017829500