Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq42965 122 6e-23 seq43265 118 7e-22 seq139 113 3e-20 seq436 109 4e-19 seq460 96.9 2e-15 seq50 95.1 8e-15 seq598 93.3 3e-14 seq459 89.7 3e-13 seq290 84.2 1e-11 seq130 84.2 1e-11 >seq42965 Length=562198 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | || || ||||| | || |||||||| ||||| ||||| || Sbjct 301184 CCTCCCCTCAAGCGCAGGACTAAGTGCAGAGTTGACTCTTTCTGGATGTTGTAGTCAGAC 301243 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| ||||| ||||| || ||||| || | | |||||||| | || Sbjct 301244 AGGGTGCGCCCATCTTCCAGTTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGG 301303 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| |||||| |||||| | || | |||| || ||| || Sbjct 301304 ATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACC 301363 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| ||| ||||| || || || || |||||||| ||||||||||| Sbjct 301364 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 301410 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| || ||| ||| |||| ||| Sbjct 301430 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCATCTTCC 301489 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || | | |||||||| | || | || |||||||| Sbjct 301490 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGG 301549 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| |||||| | || | |||| || ||| || |||| ||| ||||| || Sbjct 301550 ATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTG 301609 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || |||||||| ||||||||||| Sbjct 301610 CCAGTCAGGGTCTTCACGAAGATCTGCAT 301638 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| || ||| ||| |||| ||| Sbjct 301658 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCATCTTCC 301717 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || | | |||||||| | || | || |||||||| Sbjct 301718 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGG 301777 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| |||||| | || | |||| || ||| || |||| ||| ||||| || Sbjct 301778 ATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTG 301837 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || |||||||| ||||||||||| Sbjct 301838 CCAGTCAGGGTCTTCACGAAGATCTGCAT 301866 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| || ||| ||| |||| ||| Sbjct 301886 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCATCTTCC 301945 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || | | |||||||| | || | || |||||||| Sbjct 301946 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGG 302005 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| |||||| | || | |||| || ||| || |||| ||| ||||| || Sbjct 302006 ATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTG 302065 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || |||||||| ||||||||||| Sbjct 302066 CCAGTCAGGGTCTTCACGAAGATCTGCAT 302094 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| || ||| ||| |||| ||| Sbjct 302114 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCATCTTCC 302173 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || | | |||||||| | || | || |||||||| Sbjct 302174 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGG 302233 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| |||||| | || | |||| || ||| || |||| ||| ||||| || Sbjct 302234 ATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTG 302293 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || |||||||| ||||||||||| Sbjct 302294 CCAGTCAGGGTCTTCACGAAGATCTGCAT 302322 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| || ||| ||| |||| ||| Sbjct 302342 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCATCTTCC 302401 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || | | |||||||| | || | || |||||||| Sbjct 302402 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGG 302461 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| |||||| | || | |||| || ||| || |||| ||| ||||| || Sbjct 302462 ATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTG 302521 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || |||||||| ||||||||||| Sbjct 302522 CCAGTCAGGGTCTTCACGAAGATCTGCAT 302550 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| || ||| ||| |||| ||| Sbjct 302570 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCATCTTCC 302629 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || | | |||||||| | || | || |||||||| Sbjct 302630 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGG 302689 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| |||||| | || | |||| || ||| || |||| ||| ||||| || Sbjct 302690 ATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 302749 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || ||||| || ||||||||||| Sbjct 302750 CCAGTTAGGGTCTTTACGAAGATCTGCAT 302778 >seq43265 Length=2440742 Score = 118 bits (130), Expect = 7e-22 Identities = 145/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||||||||| ||||| | || |||| ||||||||||| ||||||||| Sbjct 2202566 TCTTTCTGGATGTTATAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAT 2202625 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||| | || | ||||||||||| || || ||||| || Sbjct 2202626 ATCAGACGCTGCTGGTTGGGTGGGATGCCCTCCTTGTCTTGGATTTTGGCCTTGAC--AT 2202683 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | |||| || | || | || ||| ||||| || ||||| || ||||||| Sbjct 2202684 TCTCGATGGTGTCACTGGGCCTGACCTTGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCA 2202743 Query 34969 CAAAGATCTGCATATT 34984 | ||||||||||| || Sbjct 2202744 CGAAGATCTGCATCTT 2202759 >seq139 Length=10686148 Score = 113 bits (124), Expect = 3e-20 Identities = 158/220 (72%), Gaps = 10/220 (5%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| |||||||| ||||| |||| || || | || |||| ||| Sbjct 400182 ACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGCAGTCAGACAGCATGCGGCCATCCTCC 400123 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTT------GCGGCACCCCCTCCTTG 34886 |||||||| ||||||||||| || || ||||||| | | || | ||||||||| Sbjct 400122 AGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTGGTGGTGGGGGGGGATGCCCTCCTTG 400063 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTA 34944 || || || ||||| || || || | |||| |||||| || |||| ||| | Sbjct 400062 TCTTGGATTTTGGCCTTGAC--ATTCTCCATGGTGTCACTGGCCTCGACCTCGAGGGTGA 400005 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 |||| || ||||| || |||||||| ||||||||||| || Sbjct 400004 TGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 399965 >seq436 Length=2687165 Score = 109 bits (120), Expect = 4e-19 Identities = 143/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||| ||||| ||||| | || |||| |||||||| || || ||||| Sbjct 806629 TCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 806688 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | || || || || ||||| || || || Sbjct 806689 ATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCAC--AT 806746 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | |||| || || || |||| ||| ||||| || || ||||||||||||| Sbjct 806747 TCTCAATGGTGTCACTGGGTTCCACCTCGAGGGTGATGGTCTTGCCAGTGAGAGTCTTCA 806806 Query 34969 CAAAGATCTGCATATT 34984 ||||||||||||| || Sbjct 806807 CAAAGATCTGCATTTT 806822 Score = 96.9 bits (106), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||| ||||| ||||| | || |||| |||||||| || || ||||| Sbjct 806401 TCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 806460 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||| || | || | || || || || ||||| || || || Sbjct 806461 ATGAGCCTCTGCTGATCAGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCAC--AT 806518 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | |||| || ||| || |||| ||| ||||| || || || || ||||||| Sbjct 806519 TCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCA 806578 Query 34969 CAAAGATCTGCATA 34982 | |||||||||||| Sbjct 806579 CGAAGATCTGCATA 806592 >seq460 Length=2238155 Score = 96.9 bits (106), Expect = 2e-15 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||| |||| ||||| ||||| || | | || |||| ||||||||||| || |||||| Sbjct 439759 TCTCTCTGGATGTTGTAGTCAGAGACAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAAT 439700 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | | | ||||||||||| | || ||||| || Sbjct 439699 ATCAGGCGCTGCTGGTCGGGTGAGATGCCCTCCTTGTCTTGGGTTTTGGCCTTGAC--AT 439642 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | |||| || ||| || |||| ||| ||||| || || || || ||||||| Sbjct 439641 TCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCA 439582 Query 34969 CAAAGATCTGCATATT 34984 ||||||||||| || Sbjct 439581 TGAAGATCTGCATCTT 439566 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/192 (70%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 34795 TCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTA 34854 |||| ||||| || || || | | || |||| ||||||||||| || |||||||| | Sbjct 439038 TCTGGATGTTGTATTCAGAGACAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAATATCA 438979 Query 34855 GTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT- 34913 || |||||||| | | | ||||||||||| | || ||||| || || Sbjct 438978 AGCGCTGCTGGTCGGGTGAGATGCCCTCCTTGTCTTGGGTTTTGGCCTTGAC--ATTCTC 438921 Query 34914 -ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAA 34972 || | |||| || ||| || |||| ||| ||||| || || || || ||||||| || Sbjct 438920 GATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCATGAA 438861 Query 34973 GATCTGCATATT 34984 ||||||||| || Sbjct 438860 GATCTGCATCTT 438849 >seq50 Length=2506936 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| |||||||| ||||| ||||| || || | || |||| ||| Sbjct 1731564 ACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCATCCTCC 1731505 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || |||||||| || || |||||||| | || | |||| |||||| Sbjct 1731504 AGCTGTTTGCCCGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTTCTTGTCTTGG 1731445 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || ||||| || || || | |||| || ||| || |||| || || | | Sbjct 1731444 ATTTTGGCCTTGAC--ATTCTCGATGGTATCACTGGGCTCGACCTCGAGGGAGATTTTCT 1731387 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTG 34978 | ||||| || ||||||| |||||||| Sbjct 1731386 TGCCCGTCAGGGTCTTCATGAAGATCTG 1731359 >seq598 Length=3788045 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34779 TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGT 34838 |||| |||| ||| || || ||||| ||||| || || | | |||| ||||||||| Sbjct 3751584 TGAAGTGTGGATTCCTTTTGGATGTTGTAGTCAGACAGAGTACACCCATCTTCCAGCTGT 3751525 Query 34839 TTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTC 34898 || || ||||| || |||| |||||| || | || | |||| ||| || || || Sbjct 3751524 TTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCCTTCTTCTCCTGGATTTTG 3751465 Query 34899 TGTTTGACGGATGCTATCG-ATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 ||| || | |||| | || | ||| ||||| |||| ||| ||||| || || || Sbjct 3751464 GCTTTTACATTTTCTATTGTATCCGACGG-TTCAACCTCGAGGGTGATGGTCTTCCCTGT 3751406 Query 34958 GAGAGTCTTCACAAAGATCTGCATATTCGTAGA 34990 ||| || || || || ||||||||||| || || Sbjct 3751405 GAGGGTTTTTACGAAAATCTGCATATTGGTGGA 3751373 >seq459 Length=1943734 Score = 89.7 bits (98), Expect = 3e-13 Identities = 152/217 (70%), Gaps = 5/217 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| |||||||| || || |||| || || | || |||| ||| Sbjct 1019159 ACCAAGTGCAGCGTGGACTCTTTCTGGAT-TTGTAGTTGGAGAGAGTGCGGCCATCTTCC 1019101 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || |||||||| || |||||||||| | || | || |||||||| Sbjct 1019100 AGCTGTTTGCCTGCAAATATCAGATGTTGCTGGTCCCGTGGGATACCTTCCTTGTCTTGG 1019041 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| || || || | |||| || || || || | ||| |||| | Sbjct 1019040 ATTTTGGTTTTGAC--ATTCTTGATGGTGTCACTGGGTTCGACCTCAAGGGTGGTGGTCT 1018983 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGT 34987 | || | || ||||||| ||||||||||| || || Sbjct 1018982 TGCCGGGCAGGGTCTTCATGAAGATCTGCATCTTTGT 1018946 Score = 89.7 bits (98), Expect = 3e-13 Identities = 152/217 (70%), Gaps = 5/217 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| |||||||| || || |||| || || | || |||| ||| Sbjct 1020663 ACCAAGTGCAGCGTGGACTCTTTCTGGAT-TTGTAGTTGGAGAGAGTGCGGCCATCTTCC 1020605 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || |||||||| || |||||||||| | || | || |||||||| Sbjct 1020604 AGCTGTTTGCCTGCAAATATCAGATGTTGCTGGTCCCGTGGGATACCTTCCTTGTCTTGG 1020545 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| || || || | |||| || || || || | ||| |||| | Sbjct 1020544 ATTTTGGTTTTGAC--ATTCTTGATGGTGTCACTGGGTTCGACCTCAAGGGTGGTGGTCT 1020487 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGT 34987 | || | || ||||||| ||||||||||| || || Sbjct 1020486 TGCCGGGCAGGGTCTTCATGAAGATCTGCATCTTTGT 1020450 >seq290 Length=9387618 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||| | | || ||||||| | || ||| |||| |||| ||||| || Sbjct 7872201 CCTCCCCTCTAGCGCAGGGCCAAGTGTAGAGTTGACTCTCTCTGGTTGTTGTAGTCGGAC 7872142 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | | |||| |||||||||| |||||| | | | ||| |||||||| | || Sbjct 7872141 AGGGTGTGCCCATCTCCCAGCTGTTTCCCGGCAGAGACTGGTCTCTGCTGGTCAGGGGGG 7872082 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTA--TCGATTCACCGGCCTCAA 34932 | || ||||| || |||||| |||| | || || | | |||| || ||| | Sbjct 7872081 ATGCCTTCCTTATCTTGGATCTTCGCTTTGGC--ATTCTCAGTGGTGTCACTGGGCTCGA 7872024 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | ||| ||||| || || || | ||||||| ||||||||||| Sbjct 7872023 CCTCAAGGGTGATGGTCTTGCCAGTCGGGGTCTTCATGAAGATCTGCAT 7871975 >seq130 Length=6872514 Score = 84.2 bits (92), Expect = 1e-11 Identities = 149/214 (70%), Gaps = 5/214 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| |||||||||||||| ||||| ||||| | |||||||| Sbjct 3042016 ACCAGGTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAAAGAACATGGCCATCATCC 3042075 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||| || || | |||||||| | || || || || || | Sbjct 3042076 AGCTGCTTGCCTGCAGCAATAAGCCTCTGCTGGTCAGGGGGGACGCCTTCTTTACCCTGG 3042135 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| || || || || | | |||||||| ||| || |||| ||| ||||| | Sbjct 3042136 ATCTTGGCCTTCAC--ATTCTCAGTGGTTTCACCGGGCTCCACCTCGAGGGTGATGGTCT 3042193 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 | || |||||||| ||| ||||||||||| || Sbjct 3042194 TGCCAATGAGAGTC-TCATGAAGATCTGCATTTT 3042226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324432809046000