Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq53 590 7e-164 seq48864 327 1e-84 seq75 138 1e-27 seq199 113 5e-20 seq79 102 9e-17 >seq53 Length=2810707 Score = 590 bits (654), Expect = 7e-164 Identities = 1476/2235 (66%), Gaps = 63/2235 (3%) Strand=Plus/Minus Query 46982 AGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAA 47041 ||||||| ||||||||| |||| | |||| | |||||||||||| |||||||| || Sbjct 1303564 AGTAAACAGGATTGGATTAGCTGCTGGTCTTGTCCTTAAATAATACATCCCAGTCTTCAA 1303505 Query 47042 ACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAAT 47101 | |||| |||||||| |||||||| || | ||| ||| ||||||| | ||| Sbjct 1303504 ATTCTGCTTCCAGCCATAGAAGTGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAAT 1303445 Query 47102 ATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAA 47161 ||| ||||| | ||| ||||| |||||||| || | | |||| | |||||||| | | Sbjct 1303444 ATGGATATTCAAAGACTGACTTTGATCAATGAAAGTATCTCTCTTGGCTGCCATCTTGAG 1303385 Query 47162 AATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGAG 47221 || | | || | || ||||| | || ||||||| || || | ||| || | | Sbjct 1303384 AACAGTTTTCTGGGAGATTTCCCACATAGTCTTATAAAGTTCCTTCAGGTCATCAGTAAT 1303325 Query 47222 AT-TAGTAT--TTTGAATAGATCCTCCgttttctataattttgttttttaa---ttcatt 47275 | | |||| | || ||||| || | | | ||||| | ||||| | |||||| Sbjct 1303324 TTCTGGTATGCTCTGGATAGAGCCATTGCATGCAATAATCTGATTTTTCATCTCTTCATT 1303265 Query 47276 tgaccaaagttttcgttcagtta-atgtttttaaAAGATGAGGATTAACAATTTGAAATT 47334 || ||| | ||||| | || ||| ||| |||||||| ||||| ||||||| Sbjct 1303264 CCAC--AAGCCC-CACTCAGTAAGATCTTTCAGTAAG-TGAGGATTTACAATCTGAAATT 1303209 Query 47335 CTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTCATTAT 47394 |||| || | ||||| | | || || || || ||||| ||||| || || ||||||| Sbjct 1303208 CTCCTGACAAGACTCTGTGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGACTCATTAT 1303149 Query 47395 TTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTA 47454 | || || || |||||||||| || |||| ||| | |||| | ||| || ||||||| Sbjct 1303148 TCCCCAAGATCTGAGCAGTTGCAGCAGTAGTCATTGGGGCAATAAGTAAACTGTTTCTTA 1303089 Query 47455 CTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGGAACAA 47514 | ||||| ||| |||| ||||||| ||||| || |||| ||| || Sbjct 1303088 CACCATACTTTGCAATCTTGTCCTTGAGAAGTTTCCAGTCCCACAGGTCTGTGGGAGTAA 1303029 Query 47515 CATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATGTTTTAT 47574 ||||||| | |||||| ||||||||| |||| |||| ||||| || | ||| |||| | Sbjct 1303028 CATTCCACACATCATACTGAAGAATTTCTTTGCTTACTGGAGAGCCCTCATAGGTTTCCT 1302969 Query 47575 AAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTT 47634 | ||||| || ||| || || ||||| || |||||||| || | |||||| || |||| Sbjct 1302968 ATGGACCATACTCTTTGGCCAGGTCACAGCTGGCTTCCAAGGCTCCATAATAAATAGTTT 1302909 Query 47635 CAAATATTTTTATGTTTAGATTCCTTG-CTTCTGATGATTCAAAAGGATANNNNNNNNNN 47693 ||| |||| | || || | || | | |||| |||||| ||||| Sbjct 1302908 GAAAGATTTGCTTATTCAG-TAACTGGACCTCTGGACTTTCAAATGGATATCTCATCAAG 1302850 Query 47694 NNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTATTAGAA 47753 || | ||| |||| ||||||| ||||| ||||| || ||| |||||| || Sbjct 1302849 ATAAAAGCATCAGCCAGAACTTGAACCCCAATTCCAATGGGGTGATGGCGTTTATTTGAT 1302790 Query 47754 AACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANNNNNNNNN 47813 | | || ||||| | || || | |||| ||| ||||||||||| | Sbjct 1302789 ACGTATGCCTCTGGAATAGGGTAGTAGTTTCTATTAATAATTTTATTCAAGTTTCGAACA 1302730 Query 47814 NNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATTTA---TAACAAAC 47870 | ||| | || ||||| || || ||| | | | ||| || Sbjct 1302729 ATGACTTCAGTGACTTCAGCCAGCTTCTTAAAGTCGTACGTGTGTTCTGATGTGACATAC 1302670 Query 47871 CTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGT 47930 |||| || || | || || | ||||| || || ||||| | | | ||||| | | Sbjct 1302669 ATATTCAGGGCCAGGGAAGCCAAGTTACAAACTGCAACCTCCTCTTTGCTGGTATACTCT 1302610 Query 47931 ATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNN 47990 | |||||| | || || || | |||||||| | |||| || || || || | Sbjct 1302609 ACTATTTCTGTGCACAGGTTGCTGCATTTGATTGCTCCCAGGTTCTGCTGGTTGCTCTTA 1302550 Query 47991 TTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATG 48050 | ||||| | | ||||| ||||| | || || |||| ||| ||||||| ||||| Sbjct 1302549 TGATTACAGGAATTTTTGTAGAGCATGTAGGG-GTGTCAGTCTCTGTCTGAGACTCAATA 1302491 Query 48051 ATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTT---CG 48107 |||| | ||||| | ||| || | ||| | | | | | | || | | Sbjct 1302490 ATAGCATACCAAAGCTGCTGAGCTTTCACAAC---TTTGTGAATGTGACCCTGCTTCTCA 1302434 Query 48108 TATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCA 48167 || || ||||| |||||||||||| || || | || | ||| | |||||||| ||| Sbjct 1302433 TACTTTTCATATAGCTTCTCAAATTCTTCTCCCCAAACTTCATCCAGGCCAGGACACTCA 1302374 Query 48168 TTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGT 48227 || ||||||||||| ||||| |||| || | ||| || | |||| || | ||||| Sbjct 1302373 TTTGGACACATCAAAGACCAGTCCTGATTAGTTTCCACCCATTTCATGAAGAGATCTGAA 1302314 Query 48228 ATCCAAAGAGCTATAAATAAATCCCTAG--TTCTTAGTTCTTCATTGCCACTATTCCTTT 48285 |||||||| || | || | |||||| | | || ||||||| || || | ||| | | Sbjct 1302313 ATCCAAAGGGCAAAGAAAAGATCCCTCGCATGCT--GTTCTTCCTTTCCTGTGTTCTTCT 1302256 Query 48286 TAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACAC 48345 | | || ||||| || | || || |||| | |||| | || || || | | | | Sbjct 1302255 TTAAATCGAGAAACTCAAAGATGTCTAAATGCTAAGGTTTCAGGTAAATAGCAAATGCCC 1302196 Query 48346 CTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACA 48405 | | || || || || |||||||||| |||| || ||||| | || ||||| | || Sbjct 1302195 CAAGACGCTTGTTTCCACCTTGATCTACGTATCGAGCTGTATTACTGTATACTCTCAGCA 1302136 Query 48406 TTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTA 48465 |||| |||| ||||| || | ||||| || || | || || || ||| |||| | | Sbjct 1302135 TTGGTACAAGGCCATTGGAATTGCCATTAGTCCCAGCAAGGTAGCTGCCAGTAGCCCGAA 1302076 Query 48466 TATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAA 48525 || ||| | | || ||| || || || || ||||| || | ||||||| | || | Sbjct 1302075 TACAACTCACAGCAACACCAATTCCCCCAGCAGACTTAGAAATCAAAGCACACTGCTTTA 1302016 Query 48526 GGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACA 48585 | ||||||||||| ||||| || || |||||| |||| || | || ||| | |||| | Sbjct 1302015 GAGTATCATAAATCCCTTCAATGCTGTCATCTTTCATGTTCAGAAGGAAATAGGTAGAAA 1301956 Query 48586 TTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCT 48645 || || || || || | ||| || | || ||||| |||||| | ||||| |||| Sbjct 1301955 GTTCTGGGCGATTGGTGCCAGCATTGAAGAGAGTGGGAGAGGCATGAGTGAACCACTTCT 1301896 Query 48646 CTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAG 48705 | || | | |||||||||||||| ||| ||| || || || || || || | || Sbjct 1301895 CAGAAAGAAGGTTATATGTTTCAATTGCAGCATCAATGTCTTCTTTGTGAATCCCCACAG 1301836 Query 48706 ATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGAT 48765 |||| | ||| ||||| | ||| ||||| ||| | | ||| | | || ||||| | || Sbjct 1301835 ATACCCTCATCAACATGTGTTGCGGTCTGTCAGCCACTTTCCCACTAATCTTCAACAAAT 1301776 Query 48766 ATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAA 48825 | || | ||||||| ||||| |||||||| ||||| ||||| || ||||| || | Sbjct 1301775 AGGACTGCTCCAATGCCTTAAAGCCAAAATAATTGTAAGAAAAATCTCGATCATAGATGA 1301716 Query 48826 TTGATGAATTT----ATTCTTT-----CC----TTATGT---TTATATACT--ACATCCA 48867 | | |||||| | ||||| || |||| | | ||| | ||| Sbjct 1301715 TGGCAGAATTTAGGCAATCTTTATTGGCCAAAACAATGTCCAGTGTTGACTTGGCCACCA 1301656 Query 48868 T--TACATTTTTTGATATAA--TTGAT-----TCCTTGTAAAGATCTTCTACAACATCAC 48918 | | | | |||| || | | ||| | |||||||| ||||| | ||||||| Sbjct 1301655 TGGAAGAGTGTTTGCCATTATGTGGATTTATGTAGTTGTAAAGGTCTTCCATCACATCAC 1301596 Query 48919 TAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAG 48978 |||| ||||| ||||||||||| || | ||||||| || || || || || | || | Sbjct 1301595 TAAACATTTTCTTTGTTTCTTTGTGCAAGTTAGATACAGCAATCCTTGCTGCCAGAATGG 1301536 Query 48979 CATAATCTGGATGAATTGTTGTACATGTACTAGATATTTCTGCTGCTAATATATCTAATT 49038 |||| || || || | || || | || || | |||| || || || |||||| || Sbjct 1301535 CATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGTT 1301476 Query 49039 CTTTAGTAGTTACACCTGTATATATTCCTTGAATAACTTTCATTGCTATATTTACTGGAT 49098 | | || || || |||| | ||||| || |||||||| | || ||| Sbjct 1301475 CAACCATGGTGACCCCACTATACAAGCCTTGGATTACTTTCATCG-TA-------AGGAC 1301424 Query 49099 CTATATGATCCATATCCAGTCCATAACATAAtttttttATTCTAGATGTAATTTTATCAA 49158 | | | | ||||||| ||||||||||| | || | |||||||||||||||| | | Sbjct 1301423 CAAAAAG-TCCATATTGAGTCCATAACAAAGCTTCTGGTTTCTAGATGTAATTTTGTAGA 1301365 Query 49159 ACATTATATTCTCTT 49173 |||| | | ||||| Sbjct 1301364 ACATGACTTGCTCTT 1301350 >seq48864 Length=438413 Score = 327 bits (362), Expect = 1e-84 Identities = 551/789 (70%), Gaps = 9/789 (1%) Strand=Plus/Plus Query 18614 AAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATTTT 18671 |||| ||| |||| || | |||||||||||| || || || ||| |||||||| | Sbjct 419683 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGG--TTGGACTTGACATAACTCCCATCCT 419740 Query 18672 TTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTC 18731 ||||| || | ||||| || |||||||| ||||| ||||| || | | | ||| || Sbjct 419741 CTGATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTC 419800 Query 18732 CATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGTAG 18791 |||||| |||||||||||| ||| | | | | | ||||| | ||| | | || Sbjct 419801 CATAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAG 419860 Query 18792 TCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTT 18851 ||||| || ||||| | ||| || ||||||| | | || ||||| | || | || Sbjct 419861 TCTATTGGCAACAAACTCAATGTACTGCTTCATCA-AGCGCAGTTCATCTCAATGAGCTT 419919 Query 18852 AACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTA-TATTTACTGCCTCTGATA-TAATA 18909 ||||| | || ||||| || || || ||||| | | || || || | ||||| | || Sbjct 419920 CACAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCAT-TGATAATGATT 419978 Query 18910 GATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAA 18969 | ||||| | || ||| || ||| || |||| ||||||| | |||| | Sbjct 419979 TCTTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACA 420038 Query 18970 TCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATC 19029 | ||| |||| | ||| ||||| || |||| |||||| |||||||| | |||||||||| Sbjct 420039 TTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATC 420098 Query 19030 AGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCT 19089 |||| || || || | ||||||||| | ||||| || |||| |||||| || |||||| Sbjct 420099 AGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGCCAGTAAAGAAGATTCCTTCT 420158 Query 19090 ACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCAT-CATTATTATGAATCCATTT 19148 |||||||||||||| || | ||||||||| |||| | | || | |||||| Sbjct 420159 ACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTTGTCCCCAATCCAACG 420218 Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 || |||||||| |||| ||| || ||||| ||||| || || || | | | || ||| | Sbjct 420219 CAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAA 420278 Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268 | || | | |||||||| || | || || | ||||| |||||||| ||| | Sbjct 420279 TTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGG 420338 Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 || ||||| || || || || || || || ||||| | |||||||| || | ||||| Sbjct 420339 TATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTC 420398 Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388 | ||||| || |||| |||||||| || || ||||||| ||| |||| || || Sbjct 420399 TTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGC 420458 Query 19389 TAATACATG 19397 | ||||| Sbjct 420459 CAGAACATG 420467 Score = 322 bits (356), Expect = 5e-83 Identities = 550/789 (70%), Gaps = 9/789 (1%) Strand=Plus/Plus Query 18614 AAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATTTT 18671 |||| ||| |||| || | |||||||||||| || || || ||| |||||||| | Sbjct 414760 AAAAGTCAGCATCTAAGGTAAAAGAATTCTCGG--TTGGACTTGACATAACTCCCATCCT 414817 Query 18672 TTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTC 18731 ||||| || | ||||| || |||||||| ||||| ||||| || | | | ||| || Sbjct 414818 CTGATACTCACCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTAAAATATTCTC 414877 Query 18732 CATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGTAG 18791 |||||| |||||||||||| ||| | | | | | ||||| | ||| | | || Sbjct 414878 CATAAAGTCAAATGGATTTCCTACTCTGAAAACCTCGCTAAATCCCAGTTCCAGCATAAG 414937 Query 18792 TCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTT 18851 ||||| || ||||| | ||| || ||||||| | | || ||||| | || | || Sbjct 414938 TCTATTGGCAACAAACTCAATGTACTGCTTCATCA-AGCGCAGTTCATCTCAATGAGCTT 414996 Query 18852 AACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTA-TATTTACTGCCTCTGATA-TAATA 18909 ||||| | || ||||| || || || ||||| | | || || || | ||||| | || Sbjct 414997 CACAGGCAAAGCCTCTGTGAGGAACTCCTGTTCCACTCTTGACAGCAT-TGATAATGATT 415055 Query 18910 GATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAA 18969 | ||||| | || ||| || ||| || |||| ||||||| | |||| | Sbjct 415056 TCTTTCACTCTCTGCTCTAACGGATAGTGTAGCAGGCGTTTGAACATCAGGTAGGCAACA 415115 Query 18970 TCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATC 19029 | ||| |||| | ||| ||||| || |||| |||||| |||||||| | |||||||||| Sbjct 415116 TTACAGTGTAAACTCTCATCTCTGCTAATCAGTTCATTGGAAAATGTGAGACCAGGCATC 415175 Query 19030 AGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCT 19089 |||| || || || | ||||||||| | ||||| || ||| |||||| || |||||| Sbjct 415176 AGTCTTCGTTCCTTGAGCCAGAATATCTATGCAAACGAGACAGTAAAGAAGATTCCTTCT 415235 Query 19090 ACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCAT-CATTATTATGAATCCATTT 19148 |||||||||||||| || | ||||||||| |||| | | || | |||||| Sbjct 415236 ACTGCTGCAAAAGCTACACAACGTTCTCCATAGGTAGCCTCCTTTGTCCCCAATCCAACG 415295 Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 || |||||||| |||| ||| || ||||| ||||| || || || | | | || ||| | Sbjct 415296 CAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATGGTTTCAATGGCACTGAAGAGAAA 415355 Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268 | || | | |||||||| || | || || | ||||| |||||||| ||| | Sbjct 415356 TTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAAACTATACATTTCAGAAGG 415415 Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 || ||||| || || || || || || || ||||| | |||||||| || | ||||| Sbjct 415416 TATGTTTTCCATGGCAATTTGGAAGCCATACAAACAGCGGGCTTCTGTAATGTCAACTTC 415475 Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388 | ||||| || |||| |||||||| || || ||||||| ||| |||| || || Sbjct 415476 TTGGCTAAATCGCTCCACCAGGTTTTCATTTACGATGCCATCACATGCTACAAAGAAAGC 415535 Query 19389 TAATACATG 19397 | ||||| Sbjct 415536 CAGAACATG 415544 >seq75 Length=11204613 Score = 138 bits (152), Expect = 1e-27 Identities = 112/136 (82%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| ||||| || |||| ||||||||||||||| | || ||||||||||||| ||| | Sbjct 8448220 CCTCATCTCTGCTAATCAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCT 8448279 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | | ||||||||| || ||||| || ||||||||||| || ||||||||||||||||| | Sbjct 8448280 TGAGCCAGAATATTGATGCAAACGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGG 8448339 Query 19103 CAACTAGTCTTTCTCC 19118 | || | | |||||| Sbjct 8448340 CTACAACACGTTCTCC 8448355 Score = 105 bits (116), Expect = 8e-18 Identities = 112/146 (77%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || || ||||||| | |||||||||||| || || || ||| |||||||| Sbjct 8444815 TTAGAAGTCCGCATCCAAGGTAAAAGAATTCTCGG--TTGGACTTGACATCACTCCCATC 8444872 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | ||||| ||| | ||||| || |||||||| ||||| ||||| || | ||| ||| Sbjct 8444873 CTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTC 8444932 Query 18730 TCCATAAAATCAAATGGATTTTTTAC 18755 |||||||| ||||||||||||| ||| Sbjct 8444933 TCCATAAAGTCAAATGGATTTTCTAC 8444958 >seq199 Length=4383281 Score = 113 bits (124), Expect = 5e-20 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| ||||| || || | |||||| ||||| || | |||||||| || ||||| || | Sbjct 4204743 CCTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCT 4204684 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | | ||||||||||| |||||| ||||| || ||||| || |||||||| || ||||| | Sbjct 4204683 TCAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 4204624 Query 19103 CAACTAGTCTTT 19114 | || | ||||| Sbjct 4204623 CCACAACTCTTT 4204612 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 18673 TGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTCC 18732 ||||| || | ||||| ||| ||||||||||| ||||| || |||||||| || |||| Sbjct 4234996 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAATGAAATGTTTTCC 4234937 Query 18733 ATAAAATCAAATGGATTTTTTACATTATATAt 18764 ||||||||||| ||||||| | ||| | |||| Sbjct 4234936 ATAAAATCAAAGGGATTTTCTGCATGAAATAT 4234905 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 19345 ACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATA 19404 |||||||||||||| || ||||||||||| ||||||||||| ||||| | || ||| Sbjct 4196941 ACCAAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGATGTGAGAGATA 4196882 Query 19405 AAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAGATAAATCTAC 19463 |||| |||||||||| ||| ||||||| | | | ||| || ||||| || || Sbjct 4196881 AAATACTTTTCATCTGGCTTTAGCTTATTCCAGTGAGGGAGATCCTTTGATAAGTCGAC 4196823 >seq79 Length=8883450 Score = 102 bits (112), Expect = 9e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387 ||||||||||| || | ||||| || | || || || || ||||| ||||| || || Sbjct 707240 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 707299 Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447 |||||||| || || || ||||||||||| || |||||||| | |||| | ||| || Sbjct 707300 TCATTATTCCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 707359 Query 47448 TTTCTTACTCCATA 47461 |||||||| ||||| Sbjct 707360 TTTCTTACACCATA 707373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561752212230000