Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq126 91.5 2e-13 >seq126 Length=2712498 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 ||||||| || || || ||||||||||| |||||||| |||| || | |||||||| | Sbjct 440308 CACCATAGGGTGACCGAGGATAGAAAGGGGTGGTCTCCTTCTGGGGTATTTCTTGCACTT 440249 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 | |||||||||||||| || || ||||| |||| Sbjct 440248 TCCCATAAAGTTCACTTGTTGAGGCTTGGTAGA 440216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665072226990000