Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq79 87.8 2e-12 >seq79 Length=8883450 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/155 (73%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 ||||| | |||||| | | || ||||| ||||||| || || || ||||| ||||| Sbjct 733584 TTTGGTATGCTATTATTGAGTCTCAGACAGAGACTGACACCCC-TACATGCTCTACAAAA 733526 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 || | ||||| | ||||| ||||| |||| ||||||||||||| || || || | Sbjct 733525 ATTCCTGTAATCATAAGAGCAACCAGCAGAACCTGGGAACAATCAAATGCAGCAACCTGT 733466 Query 75996 GCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 |||| ||||| ||||||| || || |||||| Sbjct 733465 GCACAGAAATAGTAGAGTATACCAGCAAAGATGAG 733431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596191151160000