Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq418 132 9e-26 seq5 127 4e-24 seq46174 123 5e-23 seq338 122 2e-22 seq472 120 5e-22 seq231 118 2e-21 seq432 114 2e-20 seq48498 111 3e-19 seq44605 109 1e-18 seq41602 109 1e-18 seq199 104 4e-17 seq44346 100 5e-16 seq766 100 5e-16 seq598 100 5e-16 seq377 100 5e-16 seq262 100 5e-16 seq214 100 5e-16 seq191 100 5e-16 seq79 100 5e-16 seq281 98.7 2e-15 seq347 96.9 6e-15 seq339 96.9 6e-15 seq47602 91.5 3e-13 seq436 91.5 3e-13 seq437 89.7 9e-13 seq46292 87.8 3e-12 seq236 87.8 3e-12 seq22 87.8 3e-12 seq45874 86.0 1e-11 seq711 86.0 1e-11 seq50421 84.2 4e-11 >seq418 Length=10642717 Score = 132 bits (146), Expect = 9e-26 Identities = 124/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| ||||| ||||||||||| | ||| || || ||||| || |||||||| ||| Sbjct 2806567 TCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTA 2806626 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || ||||| ||||||||| | ||| ||||||||| ||| || || ||||| ||| Sbjct 2806627 TCCTGGATTTTGGCTTTTACATTTGATATCGTATCTGACAGTTCAACCTCGAGAGTGATG 2806686 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || | ||||| ||||| |||||||| || Sbjct 2806687 GTCTTCCCTGTGAGGGTTTTTATGAAAATCTGCATCTT 2806724 >seq5 Length=157846 Score = 127 bits (140), Expect = 4e-24 Identities = 179/250 (72%), Gaps = 5/250 (2%) Strand=Plus/Minus Query 171824 ACTT-TTTAGTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTT 171882 |||| ||| |||| || |||||| | |||| || || | ||| | || | ||| | Sbjct 1292 ACTTCTTTCTTTTCTTAGCACCACCACGGAGTCTCAACACAAGATGAAGCGTGGACTCCT 1233 Query 171883 TAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTA 171942 | || || || || || |||| || | || ||||| ||||| ||||||||||| | Sbjct 1232 TTTGGATGTTGTAGTCAGACAAAGTACGCCCATCTTCCAACTGTTTGCCAGCAAAAATCA 1173 Query 171943 ATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTA 172002 ||| || || ||||| || ||||| ||||| || ||||| ||||||||| || Sbjct 1172 GTCTTTGCTGATCAGGAGG----CCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCTA 1117 Query 172003 TAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATA 172062 | |||||||||| ||| || || || |||||||| || || || | ||||| ||||| | Sbjct 1116 TTGTATCTGACGGTTCAACCTCGAGGGTAATGGTCTTCCCTGTGAGGGTTTTTATGAAAA 1057 Query 172063 TCTGCATTTT 172072 ||||||| || Sbjct 1056 TCTGCATCTT 1047 >seq46174 Length=2177 Score = 123 bits (136), Expect = 5e-23 Identities = 171/239 (72%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893 ||| || |||||| | |||| || || | ||| | || | ||| || || || Sbjct 1962 TTCTTAGCACCACCACGGAGTCTCAACACAAGATGAAGCGTGGACTCCTTTTGGATGTTG 1903 Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 || || || |||| || | || ||||| ||||| ||||||||||| | ||| || || Sbjct 1902 TAGTCAGACAAAGTACGCCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGA 1843 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 ||||| || ||||| ||||| || ||||| ||||||||| ||| ||||||||| Sbjct 1842 TCAGGAGG----CCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCTATTGTATCTGAC 1787 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| || || || |||||||| || || || | ||||| ||||| |||||||| || Sbjct 1786 GGTTCAACCTCGAGGGTAATGGTCTTCCCTGTGAGGGTTTTTATGAAAATCTGCATCTT 1728 >seq338 Length=5205875 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || || || || |||| || | || ||||| ||||| ||||||||||| | ||| Sbjct 2398063 ATGTTGTAGTCAGACAAAGTACGCCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTT 2398122 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || ||||| || |||||||| ||||| || ||||| ||||||||| ||| ||| Sbjct 2398123 TGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCTATTGTA 2398182 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || |||| ||| || || || || ||||| || || || | ||||| | ||| |||||| Sbjct 2398183 TCCGACGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTGAGGGTTTTTACGAAAATCTGC 2398242 Query 172068 ATTTT 172072 || || Sbjct 2398243 ATCTT 2398247 >seq472 Length=1492349 Score = 120 bits (132), Expect = 5e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | ||||| || || | ||| | || | ||| || || || || || || Sbjct 1223285 ACCACCACGAAGTCTCAACACAAGATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCAGA 1223226 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 |||| || |||| ||||| ||||| ||||||||||| | ||| || || || | || Sbjct 1223225 CAAAGTACGCCCGTCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCGGAAGG 1223166 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 ||| |||| ||||| || ||||| ||||||||| ||| ||||| |||| ||| || Sbjct 1223165 AATTTCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCTATTGTATCCGACGGTTCAAC 1223106 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || ||||| || || || | ||||| | ||| |||||||| || Sbjct 1223105 CTCGAGGGTGATGGTCTTCCCTGTGAGGGTTTTTACGAAAATCTGCATCTT 1223055 >seq231 Length=9897518 Score = 118 bits (130), Expect = 2e-21 Identities = 171/240 (71%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| | ||||| | |||| | ||| | || | ||| || || || Sbjct 3122537 TTTCTTAGCACCACCACGAAGTCTTCATACAAGATGAAGTGTGGACTCCTTTTGGATGTT 3122596 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| || | || ||||| ||||| ||||||||||| | ||| || || Sbjct 3122597 GTAGTCAGACAAAGCACGCCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTG 3122656 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || |||||||| ||| || ||||| |||||||||| ||| ||| |||| Sbjct 3122657 ATCAGGAGGAATTCCTTCCTTACTCTGGATTTTGGTTTTTACATTTTCTATTGTACCTGA 3122716 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || ||| ||||| || ||||| || || | | ||||| | ||| |||||||| || Sbjct 3122717 CGGTTCAGTCTCTAGGGTGATGGTCTTCCCTGAGAGGGTTTT-ACGAAAATCTGCATCTT 3122775 >seq432 Length=6714211 Score = 114 bits (126), Expect = 2e-20 Identities = 176/250 (70%), Gaps = 1/250 (0%) Strand=Plus/Plus Query 171824 ACTT-TTTAGTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTT 171882 |||| ||| |||| || |||||| | ||||| || || | ||| | | ||| | Sbjct 4307047 ACTTCTTTCTTTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGCCCGGACTCCT 4307106 Query 171883 TAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTA 171942 | || || || || || |||| || | || ||||| ||||| ||||||||||| | Sbjct 4307107 TTTGGATGTTGTAGTCAGACAAAGTACGCCCATCTTCCAACTGTTTGCCAGCAAAAATCA 4307166 Query 171943 ATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTA 172002 ||| || || ||||| || |||||||| ||||| || ||||| ||||||||| || Sbjct 4307167 GTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCTA 4307226 Query 172003 TAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATA 172062 | |||||||| ||| || || || || | ||| || || || | |||| ||||| | Sbjct 4307227 TTGTATCTGATCGTTCAACCTCGAGGGTGACGGTCTTCCCTGTGAGGATTTTTATGAAAA 4307286 Query 172063 TCTGCATTTT 172072 ||||||| || Sbjct 4307287 TCTGCATCTT 4307296 >seq48498 Length=215879 Score = 111 bits (122), Expect = 3e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || || || || ||||| || | || ||||| ||||| ||||||||||| | ||| Sbjct 7185 ATGTTGTAGTCAGACAAAGAACGCCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTT 7244 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 | | ||||| || |||||||| ||||| || ||||| ||||||||| ||| ||| Sbjct 7245 CGCCGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCTATTGTA 7304 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || |||| ||| || || || || ||||| || || || | ||||| | ||| || ||| Sbjct 7305 TCCGACGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTGAGGGTTTTTACGAAAATTTGC 7364 Query 172068 A 172068 | Sbjct 7365 A 7365 >seq44605 Length=175201 Score = 109 bits (120), Expect = 1e-18 Identities = 163/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | ||||| ||| || | ||| | || | |||||| || || || || Sbjct 1684 ACCACCACGAAGTCTTAACACAAGATGAATCGTGGACTCTTTTTGGATGTTGTAGTC--- 1740 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 |||| || | || ||||| |||| ||||||||||| | ||| || || ||||| || Sbjct 1741 -AAAGTACGCCCATCTTCCAACTGTTAGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGG 1799 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 |||||||| ||||| || ||||| ||||||||| ||| ||||| | | || || Sbjct 1800 AATTCCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCTATTGTATCCAAAGGCTCAAC 1859 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || ||||| || || | | ||||| ||||| |||||||| || Sbjct 1860 CTCGAGGGTGATGGTCTTCCCTGGGAGGGTTTTTATGAAAATCTGCATCTT 1910 Score = 102 bits (112), Expect = 1e-16 Identities = 168/241 (70%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| ||||| ||| || | ||| | || | ||| || || || Sbjct 620 TTTCTTAGCACCACCATGAAGTCTTAACACAAGATGAAGTGTGGACTCCTTTTGGATGTT 679 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| | | || ||||| ||||| ||||||||||| | ||| || || Sbjct 680 GTAGTCAGACAAAGTATGCCCATCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTG 739 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTAT-CTG 172011 || || || |||||||| ||| | || ||||| ||||||||| ||| |||| | Sbjct 740 ATCGGGAGGAATTCCTTCCTTACCCTGGATTTTGGCTTTTACATTTTCTATTGTATCCAA 799 Query 172012 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTT 172071 | | ||| || ||||| || ||||| || || || | ||||| | || |||||||| | Sbjct 800 AGGGTTCAACCTCTAGGGTGATGGTCTTCCCTGTAAGGGTTTTTACAAAAATCTGCATCT 859 Query 172072 T 172072 | Sbjct 860 T 860 >seq41602 Length=2297222 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| || || ||||||||||| | ||| || || ||||| || |||||||| ||| Sbjct 311901 TCTTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTA 311842 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || ||||| ||||||||| ||| ||||| |||| ||| || || || || ||| Sbjct 311841 TCCTGGATTTTGGCTTTTACATTTTCTATTGTATCCGACGGTTCAACCTCGAGGGTGATG 311782 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | || || || | ||||| | ||| |||||||| || Sbjct 311781 GCCTTCCCTGTGAGGGTTTTTACGAAAATCTGCATCTT 311744 >seq199 Length=4383281 Score = 104 bits (114), Expect = 4e-17 Identities = 115/152 (76%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980 || || || ||||||||||| | ||| || || ||||| || |||||||| ||||| || Sbjct 2495719 AACTGATTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 2495778 Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040 ||||| ||||||| | || ||||||||| ||| || || || |||||||| || Sbjct 2495779 ATTTTGGCTTTTACACTTTCCATTGTATCTGACAGTTCAACCTCGAGGGTAATGGTCTTC 2495838 Query 172041 CCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || | ||| | ||| ||||| |||||||| || Sbjct 2495839 CCTG-TAAGGGTTTTATGAAAATCTGCATCTT 2495869 >seq44346 Length=2084056 Score = 100 bits (110), Expect = 5e-16 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 171858 AATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCA 171917 || || | ||| || || | |||||||| | || || | |||||| | | || Sbjct 2027225 AACACAAGATGAAATGTGGACTCTTTAGC--TGTTGTAGTGAAATAAAGTAGGCCCATCT 2027282 Query 171918 TCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCT 171977 ||||| || || ||||||| || | ||| || || ||||| || ||||||| ||| Sbjct 2027283 TCCAACTGCTTGTCAGCAAATATCAGTCTTTGCTGATCAGGAGGAATTCCTT----ATCC 2027338 Query 171978 TGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTT 172037 || ||||| ||||| ||| ||| |||||||||| ||| || || ||||| ||||| Sbjct 2027339 TGGATTTTGGCTTTTATATTTTCTATTGTATCTGACGGTTCAACCTCAAGAGTGATGGTC 2027398 Query 172038 TTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || | || | ||||||||||| |||||||| || Sbjct 2027399 TTCTCCGTAAGGGTTTTAATGAAAATCTGCATCTT 2027433 >seq766 Length=1455367 Score = 100 bits (110), Expect = 5e-16 Identities = 173/250 (69%), Gaps = 1/250 (0%) Strand=Plus/Minus Query 171824 ACTT-TTTAGTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTT 171882 |||| ||| |||| || |||||| | ||||| || || | ||| | || | ||| | Sbjct 21543 ACTTCTTTCTTTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGTGTGGACTCCT 21484 Query 171883 TAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTA 171942 | || | || || || |||| | | || ||||| ||||| ||||||||||| | Sbjct 21483 TTTGGATGATGTAGTCAGACAAAGTACACCCATCTTCCAACTGTTTGCCAGCAAAAATCA 21424 Query 171943 ATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTA 172002 ||| || || |||| || |||||||| ||||| || ||||| ||||||||| || Sbjct 21423 GTCTTTGCTGAACAGGAGGAATTCCTTCCTTATCCTGGATTTTGCCTTTTACATTTTCTA 21364 Query 172003 TAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATA 172062 | ||||| ||| ||| || || || || ||||| || || || | || || | || Sbjct 21363 TTGTATCCAACGGTTCAACCTCAAGGGTGATGGTCTTCCCTGTGAGGGTGTTTACAAAAG 21304 Query 172063 TCTGCATTTT 172072 ||||||| || Sbjct 21303 TCTGCATCTT 21294 >seq598 Length=3788045 Score = 100 bits (110), Expect = 5e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| ||||| ||||||||||| | ||| || || ||||| || ||||| | || Sbjct 3751536 TCTTCCAGCTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCCTTCTTC 3751477 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || ||||| ||||||||| ||| ||||| |||| ||| || || || || ||| Sbjct 3751476 TCCTGGATTTTGGCTTTTACATTTTCTATTGTATCCGACGGTTCAACCTCGAGGGTGATG 3751417 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || | ||||| | ||| |||||||| || Sbjct 3751416 GTCTTCCCTGTGAGGGTTTTTACGAAAATCTGCATATT 3751379 >seq377 Length=8962407 Score = 100 bits (110), Expect = 5e-16 Identities = 173/250 (69%), Gaps = 1/250 (0%) Strand=Plus/Minus Query 171824 ACTT-TTTAGTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTT 171882 |||| ||| |||| || |||||| ||||| || || | ||| | || | ||| | Sbjct 4754226 ACTTCTTTCTTTTCTTAGCACCACCGTGAAGTCTCAACACAAGATGAAGCGTGGACTCCT 4754167 Query 171883 TAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTA 171942 | ||| || || || |||| || |||| ||||| |||| ||||||||||| | Sbjct 4754166 TTTGGGTATCGTAGTCAGACAAAGTACGCCCGTCTTCCAAAGGTTTGCCAGCAAAAATCA 4754107 Query 171943 ATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTA 172002 ||| || || ||| | || |||||||| ||||| || ||||| |||||| || | Sbjct 4754106 GTCTTTGCTGATCAAGAGGAATTCCTTCCTTATCCTGGATTTTGGCTTTTACCTTTTCTG 4754047 Query 172003 TAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATA 172062 | ||||| || ||| || || || || ||||| || || || | ||||| | ||| | Sbjct 4754046 TTGTATCCAACCGTTCAACCTCAAGGGTGATGGTCTTCCCTGTGAGGGTTTTTACGAAAA 4753987 Query 172063 TCTGCATTTT 172072 ||||||| || Sbjct 4753986 TCTGCATCTT 4753977 >seq262 Length=1361662 Score = 100 bits (110), Expect = 5e-16 Identities = 166/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893 ||| || ||||||| ||||| ||| | | ||| | | | ||| || || || Sbjct 634252 TTCTTAGTACCACCATGAAGTCCTAACATGAGATGAAGCATGGACTCCTTTTGGATGTTG 634193 Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 || || ||||||| | || || ||||| || || ||||||||||| | ||| || | Sbjct 634192 TAGTCAGATAAAGTATGCTCATCTTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTAA 634133 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 ||||| || |||||||||||| ||| ||||| ||||||||| ||| || ||||| Sbjct 634132 TCAGGAGGAATTCCTTCTTTAGCTTTGATTTTGGCTTTTACATTTTCTATTGTGTCTGAT 634073 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATG-TTTTAATGAATATCTGCAT 172069 | ||| | | || |||||||| || ||| ||| | |||| | || |||||||| Sbjct 634072 GGTTCAGCCTTGAGGGTAATGGTCTT-CCATGTAAGGATTTTTACAAAAATCTGCAT 634017 >seq214 Length=4870197 Score = 100 bits (110), Expect = 5e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| || || ||||||||||| | ||| | ||| || | || |||||||| ||| Sbjct 4338989 TCTTCCAACTGCTTGCCAGCAAAAATCAGTCTTTATTGATCCAGAGGAATTCCTTCCTTA 4338930 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || ||||| ||||||||| ||| |||||||| | ||| || || || || ||| Sbjct 4338929 TCCTGGATTTTGGCTTTTACATTTTCTATTGTATCTGATGGTTCAACCTCAAGTGTGATG 4338870 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | || || || | |||| ||||| |||||||| || Sbjct 4338869 ATCTTCCCTGTAAGGATTTTTATGAAAATCTGCATCTT 4338832 >seq191 Length=10176270 Score = 100 bits (110), Expect = 5e-16 Identities = 116/155 (75%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 171919 CCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG-TCAGGTGGTATTCCTTCTTTATCT 171977 |||| || || ||||||||||| | ||| || ||| ||||| || |||||||| ||||| Sbjct 6678256 CCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGGATCAGGAGGAATTCCTTCCTTATCC 6678315 Query 171978 TGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTT 172037 || ||||| ||||||||| ||| ||||| |||| ||| || || || || || || Sbjct 6678316 TGGATTTTGGCTTTTACATTTTCTATTGTATCCGACGGTTCAACCTCAAGGGTGATAGTC 6678375 Query 172038 TTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || | ||||| | ||| || ||||| || Sbjct 6678376 TTCCCTGTGAGGGTTTTTAGGAAAATGTGCATCTT 6678410 >seq79 Length=8883450 Score = 100 bits (110), Expect = 5e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| || || ||||||||||| | ||| || || ||||| || |||||||| ||| Sbjct 926617 TCTTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTA 926676 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || ||| | ||||||||| ||| ||| ||||| ||| || || || || ||| Sbjct 926677 TCCTGGATTGTGGCTTTTACATTTTCTATTGTACCTGACAGTTCAACCTCGAGGGTGATG 926736 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || | ||||| ||| |||||||| || Sbjct 926737 GTCTTCCCTGTAAGAGTTTTTTAGAAAATCTGCATCTT 926774 >seq281 Length=3840756 Score = 98.7 bits (108), Expect = 2e-15 Identities = 118/159 (74%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| |||| ||||||||||| | ||| || || ||||| || ||| |||| ||| Sbjct 2077717 TCTTCCAACTGTTCGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTTCTTCCTTA 2077776 Query 171975 TCTTGTATTTTATTTTTTACA-TTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAAT 172033 || | ||||| ||||||| || |||| ||||| ||| ||| || || || || || Sbjct 2077777 TCCCGGATTTTGACTTTTACATTTTCTTATTGTATCCAACGGTTCAACCTCGAGGGTGAT 2077836 Query 172034 GGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||| || || || | ||||| | ||| |||||||| || Sbjct 2077837 GGTCTTCCCTGTGAGGGTTTTTACGAAAATCTGCATCTT 2077875 >seq347 Length=5549683 Score = 96.9 bits (106), Expect = 6e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| || || ||||||||||| | ||| || || ||||| || ||||||| ||| Sbjct 1107869 TCTTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTTCTTA 1107810 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 | || ||||| ||||||||| ||| ||||| || | ||| || || || || ||| Sbjct 1107809 CCCTGGATTTTGGCTTTTACATTTTCTATTGTATCCGAAGGTTCAACCTCGAGGGTGATG 1107750 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || | ||||| | || |||||||| || Sbjct 1107749 GTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCATCTT 1107712 >seq339 Length=2671374 Score = 96.9 bits (106), Expect = 6e-15 Identities = 172/250 (69%), Gaps = 1/250 (0%) Strand=Plus/Minus Query 171824 ACTT-TTTAGTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTT 171882 |||| ||| |||| ||||| |||| | || || || || | ||| | | | ||| | Sbjct 1571028 ACTTCTTTCTTTTCTTAATATCACCACGAACTCTCAACACAAGATGAAGCTTGGACTCCT 1570969 Query 171883 TAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTA 171942 | | || || || || || |||| || | || |||||||| || ||||||||||| | Sbjct 1570968 TTTAGATGTTGTAGTCAGACAAAGTACGCCCATCTTCCAATTGCTTGCCAGCAAAAATAA 1570909 Query 171943 ATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTA 172002 ||| || || ||| || |||||||| | ||| || ||||| |||||| | || Sbjct 1570908 GTCTTTGCTGATCAAAAGGAATTCCTTCCTCATCCTGGATTTTGACTTTTACGTCTTCTA 1570849 Query 172003 TAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATA 172062 | ||||| | | ||| || | || || ||||| || || || | ||||| ||||| | Sbjct 1570848 TTGTATCCAATGGTTCAACCTGGAGGGTGATGGTCTTCCCTGTAAGGGTTTTTATGAAAA 1570789 Query 172063 TCTGCATTTT 172072 |||| || || Sbjct 1570788 TCTGTATCTT 1570779 >seq47602 Length=93925 Score = 91.5 bits (100), Expect = 3e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| ||||| ||||||||||| | ||| |||| ||||| | ||||||| ||| Sbjct 41695 TCTTCCAACTGTTTGCCAGCAAAAATCAGTCTTCGTTGATCAGGAGAAATTCCTTTCTTA 41754 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || ||||| ||||||||| ||| ||||| | | ||| || | || || ||| Sbjct 41755 TCCTGGATTTTGGCTTTTACATTTTCTATTGTATCCCATGGTTCAACCTTGAGGGTGATG 41814 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || | | ||| | ||| |||||||| || Sbjct 41815 GTCTTCCCTGTAAGGGATTTTACGAAAATCTGCATCTT 41852 >seq436 Length=2687165 Score = 91.5 bits (100), Expect = 3e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || | || | ||||| |||||| ||| || || || Sbjct 806590 ATACCACCTCTCAGGCGCAGGACCAGGTGCAGAGTAGACTCTTTCTGAATGTTGTAGTCA 806649 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || |||| || || || ||||| || | ||||| |||||||| Sbjct 806650 GAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGA 806709 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||| || || || || ||||| || || || | ||| Sbjct 806710 GGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCC 806769 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || ||||| || ||||| | || || | || ||||||||||| Sbjct 806770 ACCTCGAGGGTGATGGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCATTTT 806822 >seq437 Length=4253964 Score = 89.7 bits (98), Expect = 9e-13 Identities = 109/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 171927 TTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 171986 || ||||||||||| ||||| || || | ||| || ||| | || ||||| || ||||| Sbjct 1825249 TTGCCAGCAAAAATCAATCTTTGCTGATTAGGAGGAATTAC-TCCTTATCCTGGATTTTG 1825307 Query 171987 TTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 172046 ||||||||| ||| ||||| || | ||| || || || | ||||| || || | | Sbjct 1825308 GCTTTTACATTTTCTATTGTATCCGATGGTTCAACCTCCAGGGCGATGGTCTTCCCTG-T 1825366 Query 172047 AATGTTTTAATGAATATCTGCATTTT 172072 || ||||| ||||| |||||||| || Sbjct 1825367 AAGGTTTTTATGAAAATCTGCATCTT 1825392 >seq46292 Length=2448560 Score = 87.8 bits (96), Expect = 3e-12 Identities = 115/158 (73%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| | ||| ||||||||||| | ||| || |||||||| || ||||||| ||| Sbjct 2268606 TCTTCCAACTCTTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGGAGGAATTCCTTTCTTA 2268665 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || | ||| ||||||||| ||| ||||| | ||| || | || || ||| Sbjct 2268666 TCCTGGA-TTTGGCTTTTACATTTTCTATTGTATCCCATAGTTCAACCCCAAGGGTGATG 2268724 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || | | ||||| ||||| |||||||| || Sbjct 2268725 GTCTTCCCCATAAGGGTTTTTATGAAAATCTGCATCTT 2268762 >seq236 Length=6197579 Score = 87.8 bits (96), Expect = 3e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| ||||| ||||||||||||| ||| ||| | ||||| || |||||||| ||| Sbjct 208058 TCTTCCAACTGTTTGCCAGCAAAAATTAGTCTTTGTGGATCAGGAGGAATTCCTTCCTTA 207999 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || ||||| ||||||||| ||| ||||||| | || | || || || ||| Sbjct 207998 TCCTGGATTTTGGCTTTTACATTTTCTATTATATCTGATGGCTCACCCTCAAGGGTGATG 207939 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCT 172065 | || || | |||| ||||| |||| Sbjct 207938 ATCTTCCCCACAAGGATTTTTATGAAAATCT 207908 >seq22 Length=6951220 Score = 87.8 bits (96), Expect = 3e-12 Identities = 110/150 (73%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 171918 TCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCT 171977 ||||| ||||| ||||||||||| | ||| || || ||||| | |||||||| ||||| Sbjct 5593125 TCCAACTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAAGAATTCCTTCCTTATCC 5593066 Query 171978 TGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTT 172037 || ||| | ||||||||| || ||||| |||| ||| | | ||| |||||||| Sbjct 5593065 TGGATTCTGGCTTTTACATTTTCTACTGTATCCGACGGTTCAGCCTGTAGGGTAATGGTC 5593006 Query 172038 TTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || | | ||||| | || |||||| Sbjct 5593005 TT-CCCTTGAGGGTTTTTACAAAAATCTGC 5592977 >seq45874 Length=746945 Score = 86.0 bits (94), Expect = 1e-11 Identities = 116/161 (72%), Gaps = 3/161 (2%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||| | || || ||||||||||| | ||| || || |||| || |||||||| ||| Sbjct 537636 TCTTCCGACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGAAGGAATTCCTTCCTTA 537695 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATC---TGACGATTCTACTTCTAGAGTA 172031 || || ||||| |||||| || ||| ||||| | | |||| || || || || Sbjct 537696 TCCTGGATTTTGGCTTTTACGTTTTCTATTGTATCCAATCTCTATTCAACCTCCAGGGTG 537755 Query 172032 ATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 |||| || || || | ||||| ||||| |||||||| || Sbjct 537756 GTGGTCTTCCCTGTAAGGGTTTTTATGAAAATCTGCATCTT 537796 >seq711 Length=2489675 Score = 86.0 bits (94), Expect = 1e-11 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| || |||||||||||||| | || || || ||||| || |||||||| ||| Sbjct 462043 TCTTCCAACTGCTTACCAGCAAAAATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTA 461984 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || | ||||| ||||||||| ||| |||| |||| ||| | | || | ||| Sbjct 461983 TCCTCGATTTTGGCTTTTACATTTTCTATTTTATCCGACGGTTCACCCGCGAGGGCGATG 461924 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATC 172064 || || || || | ||||| ||||| ||| Sbjct 461923 GTCTTCCCTGTAAGGGTTTTTATGAAAATC 461894 >seq50421 Length=4717412 Score = 84.2 bits (92), Expect = 4e-11 Identities = 114/158 (72%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| || || ||||||||||| | ||| || || ||||| | |||||||| ||| Sbjct 3412778 TCTTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAAGAATTCCTTCCTTA 3412719 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || ||||| ||||||||| ||| ||||| | | ||| || || || ||| Sbjct 3412718 TCCTGGATTTTGGCTTTTACATTTTCTATGGTATCCAATGGTTCAGTCTCAAGGGTGATG 3412659 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || | | ||| ||||| || ||||| || Sbjct 3412658 GTCTTCCCTGTAAGGGCTTTTATGAAAAT-TGCATCTT 3412622 Score = 84.2 bits (92), Expect = 4e-11 Identities = 114/158 (72%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| || || ||||||||||| | ||| || || ||||| | |||||||| ||| Sbjct 3413790 TCTTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAAGAATTCCTTCCTTA 3413731 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || ||||| ||||||||| ||| ||||| | | ||| || || || ||| Sbjct 3413730 TCCTGGATTTTGGCTTTTACATTTTCTATGGTATCCAATGGTTCAGTCTCAAGGGTGATG 3413671 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || | | ||| ||||| || ||||| || Sbjct 3413670 GTCTTCCCTGTAAGGGCTTTTATGAAAAT-TGCATCTT 3413634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904561804350000