Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq46246 176 5e-38 seq40807 176 5e-38 seq246 161 1e-33 seq41850 109 7e-18 seq40671 105 8e-17 seq40396 100 3e-15 seq508 100 3e-15 seq234 93.3 5e-13 seq108 93.3 5e-13 seq337 91.5 2e-12 seq49866 87.8 2e-11 seq398 87.8 2e-11 seq75 87.8 2e-11 seq44779 86.0 8e-11 >seq46246 Length=2978152 Score = 176 bits (194), Expect = 5e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 2802246 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 2802187 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 2802186 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGA 2802127 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 2802126 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 2802067 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||||||||||||||| Sbjct 2802066 GGACCTGCTTGAGCACCTTGTA 2802045 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 2774825 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 2774766 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| ||||||| |||| | Sbjct 2774765 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCTGCGATGCGCTCGAAGA 2774706 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 2774705 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 2774646 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||||||||||||||| Sbjct 2774645 GGACCTGCTTGAGCACCTTGTA 2774624 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 2809181 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 2809240 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| ||||||| |||| | Sbjct 2809241 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCTGCGATGCGCTCGAAGA 2809300 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 2809301 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 2809360 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||||||||||||||| Sbjct 2809361 GGACCTGCTTGAGCACCTTGTA 2809382 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 2839188 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 2839129 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 2839128 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGA 2839069 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| || || || ||| || | Sbjct 2839068 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAAGAAATACCGGTGTCAGGAT 2839009 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||| ||||| ||||||||||| Sbjct 2839008 GCACTTGCTTCAGCACCTTGTA 2838987 >seq40807 Length=1500189 Score = 176 bits (194), Expect = 5e-38 Identities = 169/217 (78%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 577232 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 577173 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 577172 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 577113 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 577112 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 577053 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||||||||||||||| | | || |||||| Sbjct 577052 GCACCTGCTTGAGCACCTTGTACACGTACACCGAGTA 577016 Score = 174 bits (192), Expect = 2e-37 Identities = 167/214 (78%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| ||| | |||||||||||| |||||||||||||||| ||| | Sbjct 830992 TGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGATGG 831051 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| |||||||||| || |||||| ||||||| |||| |||| Sbjct 831052 TCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 831111 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||||| Sbjct 831112 CGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCA 831171 Query 1254526 CCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 ||||||| ||||||||||| | | || |||||| Sbjct 831172 CCTGCTTCAGCACCTTGTACACGTACACCGAGTA 831205 Score = 170 bits (188), Expect = 2e-36 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 554867 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 554926 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 554927 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 554986 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 554987 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 555046 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||| ||||||||||| | | || |||||| Sbjct 555047 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 555083 Score = 170 bits (188), Expect = 2e-36 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 591765 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 591706 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 591705 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 591646 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 591645 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 591586 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||| ||||||||||| | | || |||||| Sbjct 591585 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 591549 Score = 170 bits (188), Expect = 2e-36 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 610146 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 610205 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 610206 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 610265 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 610266 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 610325 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||| ||||||||||| | | || |||||| Sbjct 610326 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 610362 Score = 170 bits (188), Expect = 2e-36 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||| ||||| ||||||||||| |||| || Sbjct 640795 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGGACGGCCGTCTGGATCTCCCGCGACGTGA 640736 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 640735 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 640676 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 640675 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 640616 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||||||||||||||| | | || |||||| Sbjct 640615 GCACCTGCTTGAGCACCTTGTACACGTACACCGAGTA 640579 Score = 170 bits (188), Expect = 2e-36 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||| ||||| ||||||||||| |||| || Sbjct 650346 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGGACGGCCGTCTGGATCTCCCGCGACGTGA 650287 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 650286 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 650227 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 650226 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 650167 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||||||||||||||| | | || |||||| Sbjct 650166 GCACCTGCTTGAGCACCTTGTACACGTACACCGAGTA 650130 Score = 170 bits (188), Expect = 2e-36 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 819520 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 819579 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 819580 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 819639 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 819640 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 819699 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||| ||||||||||| | | || |||||| Sbjct 819700 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 819736 Score = 170 bits (188), Expect = 2e-36 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 1046812 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 1046753 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 1046752 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 1046693 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 1046692 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 1046633 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||| ||||||||||| | | || |||||| Sbjct 1046632 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 1046596 Score = 167 bits (184), Expect = 3e-35 Identities = 167/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||| ||| |||| || Sbjct 1081801 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGAGCTCCCGCGACGTGA 1081742 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 1081741 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 1081682 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 1081681 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAAGAGATGCCCGTGTCGGGGT 1081622 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||| ||||||||||| | | || |||||| Sbjct 1081621 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 1081585 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 514927 GCTTGGCCAACTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 514986 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 514987 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 515046 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 515047 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 515106 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 515107 GCACCTGCTTCAGCACCTTGTA 515128 Score = 158 bits (174), Expect = 1e-32 Identities = 165/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| |||| || Sbjct 1060260 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGCGACGTGA 1060201 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| ||||||| |||| | Sbjct 1060200 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAATA 1060141 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||| | |||||||||||| ||| | |||| ||||||||| ||||||| Sbjct 1060140 TGTCGTTGGCGCACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTATCGGGGT 1060081 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||| ||||||||||| | | || |||||| Sbjct 1060080 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 1060044 >seq246 Length=8872645 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||| | |||||| | || Sbjct 8788198 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGA 8788139 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| ||| ||||||| || ||||||| |||| | Sbjct 8788138 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGTTCGAAGA 8788079 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| ||| |||| Sbjct 8788078 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 8788019 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 8788018 GTACCTGCTTCAGCACCTTGTA 8787997 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||| | |||||| | || Sbjct 8793221 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGA 8793280 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| ||| ||||||| || ||||||| |||| | Sbjct 8793281 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGTTCGAAGA 8793340 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| ||| |||| Sbjct 8793341 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 8793400 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 8793401 GTACCTGCTTCAGCACCTTGTA 8793422 >seq41850 Length=782083 Score = 109 bits (120), Expect = 7e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165 ||||||| || |||||||| | |||||| | || ||| | || || || | Sbjct 721379 AGAAGCGAACAGACGACATTCCTGTTTGGGACCAAGAATTTCTGAAGGTTGACCAAGGAA 721320 Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 | || |||||| | ||||| || || |||||| | |||||||| | |||| ||| || Sbjct 721319 CACTTTTTGAGCTTATCCTGGCTGCAAACTACTTGGACATCAAAGGTTTGCTTGATGTTA 721260 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 |||||| |||| ||||| ||||||||||| || | || |||||||| |||||||| | Sbjct 721259 CATGCAAGACTGTTGCCAATATGATCAAGGGAAAAACTCCTGAGGAGATTCGCAAGACTT 721200 Query 1592286 TTAACATCAA 1592295 | || ||||| Sbjct 721199 TCAATATCAA 721190 >seq40671 Length=2859160 Score = 105 bits (116), Expect = 8e-17 Identities = 156/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||| | ||||||||||||||| | | || Sbjct 1392265 GCTTGGCCAGCTCCCCAGGCAGCAGCAGGCGGAGGGCGGTCTGGATCTCCCACAACGTGA 1392324 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAG--ACGGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 | || |||| ||| |||| ||||| ||| | |||||| || || | |||| Sbjct 1392325 TGGTCGGGCGCCTGTCGTAGTGTGCCAGGTACGAC--GCCTCGCCTGCGGTGTGCTCGAA 1392382 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 ||||| |||| ||| |||||||| ||| | |||| ||||||||| |||||| Sbjct 1392383 GATGTCACTGACGAACAGGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGGGTCGGG 1392442 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||||| ||||||| ||| | | || |||||| Sbjct 1392443 GTGCACCTGCTTCAGCACCTCGTACACGTACACCGAGTA 1392481 >seq40396 Length=3283941 Score = 100 bits (110), Expect = 3e-15 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165 ||||||| | |||||||| | |||||| | || ||| | | || || || | Sbjct 2214663 AGAAGCGAGCAGACGACATTCCTGTTTGGGACCAAGAATTTCTCAAGGTTGACCAAGGAA 2214604 Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 || |||||| | ||| | || || |||||| | |||||||| | |||| ||| || Sbjct 2214603 TACTTTTTGAGCTTATCGTGGCTGCAAACTACTTGGACATCAAAGGTTTGCTTGATGTTA 2214544 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 |||||| |||| ||||| ||||||||||| || | || |||||||| |||||||| | Sbjct 2214543 CATGCAAGACTGTTGCCAATATGATCAAGGGAAAAACTCCTGAGGAGATTCGCAAGACTT 2214484 Query 1592286 TTAACATCAA 1592295 | || ||||| Sbjct 2214483 TCAATATCAA 2214474 >seq508 Length=6876435 Score = 100 bits (110), Expect = 3e-15 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165 ||||||| || |||||||| | |||||| | || ||| | || || || | Sbjct 6802317 AGAAGCGAACAGACGACATTCCTGTTTGGGACCAAGAATTTCTGAAGGTTGACCAAGGAA 6802376 Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 | || |||||| | ||||| || || |||||| | |||||||| | |||| ||| || Sbjct 6802377 CACTTTTTGAGCTTATCCTGGCTGCAAACTACTTGGACATCAAAGGTTTGCTTGATGTTA 6802436 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 |||||| |||| ||||| ||||||||||| || | || ||| |||| | |||||| | Sbjct 6802437 CATGCAAGACTGTTGCCAATATGATCAAGGGAAAAACTCCTGAGCAGATTCACAAGACTT 6802496 Query 1592286 TTAACATCAA 1592295 | || ||||| Sbjct 6802497 TCAATATCAA 6802506 >seq234 Length=4313278 Score = 93.3 bits (102), Expect = 5e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || || ||||| || ||||| || || |||||| | |||||||| | |||| ||| || Sbjct 1715348 ACACTTTTTGAATTTATCCTGGCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 1715407 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| ||||| ||||||||||| || | || ||||||| | ||||| Sbjct 1715408 ACATGCAAGACTGTTGCCAATATGATCAAGGGAAAAACTCCTTAGGAGATTCAGAAGACT 1715467 Query 1592285 TTTAACATCAA 1592295 ||||| ||||| Sbjct 1715468 TTTAAAATCAA 1715478 >seq108 Length=8981738 Score = 93.3 bits (102), Expect = 5e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || || |||||| | ||||| || || |||||| | |||||||| | |||| ||| || Sbjct 829460 ACACTTTTTGAGCTTATCCTGGCTGCAAACTACTTGGACATCAAAGGTTTGCTTGATATT 829519 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 ||||| |||| ||||| ||||||||||| || | || |||||||| ||||||| Sbjct 829520 ACACGCAAGACTGTTGCCAATATGATCAAGGGAAAAACTCCTGAGGAGATTGGCAAGACT 829579 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 829580 TTCAATATCAA 829590 >seq337 Length=2641972 Score = 91.5 bits (100), Expect = 2e-12 Identities = 135/190 (71%), Gaps = 6/190 (3%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| || | | | |||||||||||| ||||||| ||| || | | Sbjct 557068 GCTTGGCCAGTTCCCCAGGTAGCAGCAGGCGCACGGCCGTCTGGACCTCCCGGGAAGTCA 557127 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGC---GCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 |||| | || | ||||| | ||||| ||| ||||||| | | || || | Sbjct 557128 GCGTGGTTCG---GCCCGAGTACTGGGCCAGCCGGGCGGCCTCCCCAGCCAGCCGCTCAA 557184 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 || |||||| |||||||||||||||| ||| | |||| |||||||| | ||||| Sbjct 557185 ACACGTCGTTCACAAACGAGTTCATGATGCTCATGGCCTTGGCAGAGATGCCGATGTCGG 557244 Query 1254520 GGTGCACCTG 1254529 |||||||||| Sbjct 557245 GGTGCACCTG 557254 >seq49866 Length=1811539 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 4/131 (3%) Strand=Plus/Minus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || |||||| | | ||||| || || ||||| |||||||| | |||| ||| || Sbjct 1191017 ACACTCTTTTAACTTATCCTTGCTGCAAACTA----GACATCAAAGGTTTGCTTGATGTT 1190962 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| ||||| ||||||||||| || | || |||||||| |||||||| Sbjct 1190961 ACATGCAAGACTGTTGCCAATATGATCAAGGGAAAAACTCCTGAGGAGATTCGCAAGACT 1190902 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 1190901 TTCAATATCAA 1190891 >seq398 Length=3125954 Score = 87.8 bits (96), Expect = 2e-11 Identities = 120/164 (73%), Gaps = 4/164 (2%) Strand=Plus/Minus Query 512000 GTGCTGGGCATCGAGGCCGCCGTGGCCGTGCTCTTTTCCGAGATCAAGGCC--GTCATCT 512057 ||||||||||||||||||| | || | || || ||||| | || ||||||| Sbjct 1070142 GTGCTGGGCATCGAGGCCGT-GCGGAAG-GCGCTGGAGCGAGAGCTGTACCATGTCATCT 1070085 Query 512058 CCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACACCATGTGCT 512117 |||| |||||| |||||||||| |||| ||||| || || |||||||||| || Sbjct 1070084 CCTTCGACGGCTCCTACGTCAATTACCGGCACTTGGCTCTCCTGTGCGACACCATGACCT 1070025 Query 512118 GCCGCGGATCGGTGGTGGCCGTCACGCGCCACGGCTTCAACCGC 512161 ||||||| || ||||| |||| || ||||| |||||||| Sbjct 1070024 GCCGCGGCCACTTGATGGCCATCACCCGACACGGAGTCAACCGC 1069981 >seq75 Length=11204613 Score = 87.8 bits (96), Expect = 2e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 869831 ACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACTTGCTGG 869890 ||||||||||||||||| | || |||||||| || |||||||||| ||| | | ||| Sbjct 8453349 ACCTCCTCGGCGGTCCAAAAGGAAGCCTCGGCTTTCTTGTACATCTGCCAGATGTCGTGG 8453408 Query 869891 TAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGGGGTTC 869943 || ||| || |||| |||||||||| |||||| || | || ||| || || Sbjct 8453409 TACTCGATGGGAAAGATGACAAAGCGGCGGGGGTTTTCTCTCAGCAGTGGCTC 8453461 >seq44779 Length=5528144 Score = 86.0 bits (94), Expect = 8e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | |||||||| | |||| ||| || |||||| |||| ||||| Sbjct 2081231 GCTGCAAACTACTTGGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCCAAT 2081290 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 ||||||||||| || | || |||||||| |||||||| || || ||||| Sbjct 2081291 ATGATCAAGGGAAAAACTCCTGAGGAGATTCGCAAGACTTTCAATATCAA 2081340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6102974417337750