Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq42965 127 2e-24 seq598 123 2e-23 seq44605 116 3e-21 seq48498 104 2e-17 seq459 100 3e-16 seq436 100 3e-16 seq262 98.7 9e-16 seq139 96.9 3e-15 seq137 96.9 3e-15 seq43265 93.3 4e-14 seq50 87.8 2e-12 seq732 86.0 6e-12 seq580 86.0 6e-12 seq460 86.0 6e-12 seq47707 82.4 7e-11 seq309 82.4 7e-11 >seq42965 Length=562198 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || ||||| || || ||| Sbjct 301411 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 301352 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || ||||| || || Sbjct 301351 TGACACCATTGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 301292 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||| |||||||| ||||| ||| | | | | |||| || || || Sbjct 301291 GCAGAGGTTGATCTTTGCTGGGAAACAACTGGAAGATGGGCGCACCCTGTCTGACTACAA 301232 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || || || || || || ||||| || |||| ||| | ||||| Sbjct 301231 CATCCAGAAAGAGTCAACTCTGCACTTAGTCCTGCGCTTGAGGGGAGG 301184 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || ||||| || || || || || ||||| || || ||| Sbjct 302778 ATGCAGATCTTCGTAAAGACCCTAACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 302719 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || ||||| || || Sbjct 302718 GACACCATTGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCAG 302659 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||||||||||||||| ||| | | |||| || || ||| Sbjct 302658 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCCCCCTGTCCGACTACAAC 302599 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 302598 ATCCAGAAGGAGTCCACCCTGCACCTGGT 302570 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || ||||| || || ||| Sbjct 301639 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 301580 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || ||||| || || Sbjct 301579 TGACACCATTGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 301520 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||||||||||||||||||| ||| | | |||| || || || Sbjct 301519 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCCCCCTGTCCGACTACAA 301460 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 301459 CATCCAGAAGGAGTCCACCCTGCACCTGGT 301430 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || ||||| || || ||| Sbjct 301867 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 301808 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || ||||| || || Sbjct 301807 TGACACCATTGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 301748 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||||||||||||||||||| ||| | | |||| || || || Sbjct 301747 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCCCCCTGTCCGACTACAA 301688 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 301687 CATCCAGAAGGAGTCCACCCTGCACCTGGT 301658 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || ||||| || || ||| Sbjct 302095 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 302036 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || ||||| || || Sbjct 302035 TGACACCATTGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 301976 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||||||||||||||||||| ||| | | |||| || || || Sbjct 301975 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCCCCCTGTCCGACTACAA 301916 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 301915 CATCCAGAAGGAGTCCACCCTGCACCTGGT 301886 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || ||||| || || ||| Sbjct 302323 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 302264 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || ||||| || || Sbjct 302263 TGACACCATTGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 302204 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||||||||||||||||||| ||| | | |||| || || || Sbjct 302203 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCCCCCTGTCCGACTACAA 302144 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 302143 CATCCAGAAGGAGTCCACCCTGCACCTGGT 302114 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || ||||| || || ||| Sbjct 302551 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 302492 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || ||||| || || Sbjct 302491 TGACACCATTGAGAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 302432 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||||||||||||||||||| ||| | | |||| || || || Sbjct 302431 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCCCCCTGTCCGACTACAA 302372 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || || ||| |||| Sbjct 302371 CATCCAGAAGGAGTCCACCCTGCACCTGGT 302342 >seq598 Length=3788045 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || || || || || || || ||||| || ||| | | Sbjct 3751382 ATGCAGATTTTCGTAAAAACCCTCACAGGGAAGACCATCACCCTCGAGGTTGAACCGTCG 3751441 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||||| |||||| || ||||| || || | ||||| ||||| ||||| Sbjct 3751442 GATACAATAGAAAATGTAAAAGCCAAAATCCAGGAGAAGAAGGGAATTCCTCCTGATCAG 3751501 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||| ||||| || ||||||||||| ||| | | | |||| || || ||| Sbjct 3751502 CAAAGACTGATTTTTGCTGGCAAACAGCTGGAAGATGGGTGTACTCTGTCTGACTACAAC 3751561 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 || ||||||||||| ||||| || | ||||| || Sbjct 3751562 ATCCAAAAGGAATCCACACTTCATCTTCTGTTGAGA 3751597 Score = 113 bits (124), Expect = 4e-20 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | ||||| || | || || ||||| || ||||| || ||| | | Sbjct 1806469 GATGCAGATTTTTGTAAAAACCCTGCCAGGGAAGACTATCACCCTCGAGGTTGAACCATC 1806410 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| ||||| |||||| || || || || || |||||||| ||||| || || Sbjct 1806409 AGATACAACAGAAAATGTAAAAGCCAAAATTCAGGATAAGGAAGGAATTCCTCCTGACCA 1806350 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||| ||| | || || ||| |||| ||| ||| | |||| || | || Sbjct 1806349 GCAAAGACTGATTTTTTCTGGCAAGCAGTTGGAAGATGGGAGTACTCTGTCTGACTGCAA 1806290 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGG 24927 ||| ||||||||||| || || || | |||||| || | || || Sbjct 1806289 CATCCAAAAGGAATCCACGCTTCATCTTGTGTTGAGACTTCGTGG 1806245 >seq44605 Length=175201 Score = 116 bits (128), Expect = 3e-21 Identities = 155/214 (72%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | ||||| || || || || || || || || || || ||| || Sbjct 858 GATGCAGATTTTTGTAAAAACCCTTACAGGGAAGACCATCACCCTAGAGGTTGAACCCTT 799 Query 24763 CG-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 | | ||| |||||| |||||| || ||||| | || |||||||| |||||||||| Sbjct 798 TGGATACAATAGAAAATGTAAAAGCCAAAATCCAGGGTAAGGAAGGAATTCCTCCCGATC 739 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | ||| | |||| ||||| || |||||| |||| ||| | | |||| || || | Sbjct 738 AGCAAAGACTGATTTTTGCTGGCAAACAGTTGGAAGATGGGCATACTTTGTCTGACTACA 679 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||| |||||||| || ||||| || | ||||| Sbjct 678 ACATCCAAAAGGAGTCCACACTTCATCTTGTGTT 645 >seq48498 Length=215879 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 |||| || || | ||||| || || || || || || || ||||| || ||| | | | Sbjct 7365 TGCAAATTTTCGTAAAAACCCTCACAGGGAAGACCATCACCCTCGAGGTTGAACCGTCGG 7306 Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 | ||| |||||| |||||| || ||||| || || |||||||| ||||| |||| | Sbjct 7305 ATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCGGC 7246 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 | | |||| ||||| || |||||| |||| ||| | | |||| || || |||| Sbjct 7245 GAAGACTGATTTTTGCTGGCAAACAGTTGGAAGATGGGCGTTCTTTGTCTGACTACAACA 7186 Query 24885 TTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 | ||||||||||| | || || | |||||| || Sbjct 7185 TCCAAAAGGAATCCATGCTTCATCTTGTGTTGAGA 7151 >seq459 Length=1943734 Score = 100 bits (110), Expect = 3e-16 Identities = 169/241 (70%), Gaps = 3/241 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| || || || || |||| || || | || || || || ||| ||| Sbjct 1018951 GATGCAGATCTTCATGAAGACCCTGCCCGGCAAGACCACCACCCTTGAGGTCGAACCCAG 1019010 Query 24763 CGACA-CAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 |||| || | || | ||||| ||| ||||||||||| ||||| || || | || | Sbjct 1019011 TGACACCATCAAGAATGTCAAAACCAAA-ATCCAAGACAAGGAAGGTATCCCACGGGACC 1019069 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | |||| | |||| ||||| || ||||||||||| ||| | | | || | || | Sbjct 1019070 AGCAACATCTGATATTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCCAACTACA 1019129 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGC 24941 | || || || || || || || ||||||||| |||| |||| || || ||||||| Sbjct 1019130 A-ATCCAGAAAGAGTCCACGCTGCACTTGGTGCTGCGTCTGCGAGGCAGCATCACTGAGC 1019188 Query 24942 C 24942 | Sbjct 1019189 C 1019189 Score = 100 bits (110), Expect = 3e-16 Identities = 169/241 (70%), Gaps = 3/241 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| || || || || |||| || || | || || || || ||| ||| Sbjct 1020455 GATGCAGATCTTCATGAAGACCCTGCCCGGCAAGACCACCACCCTTGAGGTCGAACCCAG 1020514 Query 24763 CGACA-CAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 |||| || | || | ||||| ||| ||||||||||| ||||| || || | || | Sbjct 1020515 TGACACCATCAAGAATGTCAAAACCAAA-ATCCAAGACAAGGAAGGTATCCCACGGGACC 1020573 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | |||| | |||| ||||| || ||||||||||| ||| | | | || | || | Sbjct 1020574 AGCAACATCTGATATTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCCAACTACA 1020633 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGC 24941 | || || || || || || || ||||||||| |||| |||| || || ||||||| Sbjct 1020634 A-ATCCAGAAAGAGTCCACGCTGCACTTGGTGCTGCGTCTGCGAGGCAGCATCACTGAGC 1020692 Query 24942 C 24942 | Sbjct 1020693 C 1020693 >seq436 Length=2687165 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || ||||| || ||| ||| Sbjct 806819 ATGCAGATCTTTGTGAAGACTCTCACTGGCAAGACCATCACCCTCGAGGTGGAACCCAGT 806760 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || |||||||| || ||||| || || Sbjct 806759 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCTGACCAG 806700 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || || |||||||| ||| | | | || || || ||| Sbjct 806699 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 806640 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||||| || || || || || ||| |||| |||| Sbjct 806639 ATTCAGAAAGAGTCTACTCTGCACCTGGTCCTGCG 806605 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || ||||| || || ||| Sbjct 806591 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTGGAGCCCAGT 806532 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || |||||||| || ||||| ||||| Sbjct 806531 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCTGATCAG 806472 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || || |||||||| ||| | | | || || || ||| Sbjct 806471 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 806412 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || || || || || ||| |||| Sbjct 806411 ATTCAGAAAGAGTCTACTCTGCACCTGGT 806383 >seq262 Length=1361662 Score = 98.7 bits (108), Expect = 9e-16 Identities = 142/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | |||| || || | || || ||||| ||| | | ||| | | Sbjct 634016 GATGCAGATTTTTGTAAAAATCCTTACATGGAAGACCATTACCCTCAAGGCTGAACCATC 634075 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| |||||| |||||| || ||| ||| ||||||||||| ||||| ||| | Sbjct 634076 AGACACAATAGAAAATGTAAAAGCCAAAATCAAAGCTAAAGAAGGAATTCCTCCTGATTA 634135 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAG-AAAC-ATGTCAGATTAT 24880 ||| | |||| ||||| || || ||| |||| ||| ||| | || | || || || Sbjct 634136 GCAAAGACTGATTTTTGCTGGCAAGCAGTTGGAAGAT--GAGCATACTTTATCTGACTAC 634193 Query 24881 AACATTCAAAAGGAATC 24897 ||||| |||||||| || Sbjct 634194 AACATCCAAAAGGAGTC 634210 >seq139 Length=10686148 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/235 (69%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || ||||| || || |||| Sbjct 399967 GATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGGCCAG 400026 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || || ||||||||||| || || || || ||| | || Sbjct 400027 TGACACCATGGAGAATGTCAAGGCCAAAATCCAAGACAAGGAGGGCATCCCCCCCCACCA 400086 Query 24823 ACAAC------GTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGA 24876 || | || |||| |||||||| ||||||||||||||| | | |||| || Sbjct 400087 CCACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCATGCTGTCTGA 400146 Query 24877 TTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 | ||||| || || || || || || ||| ||||| |||| || | || ||| Sbjct 400147 CTGCAACATCCAGAAAGAGTCCACCCTCCACCTGGTGCTGCGTCTGTGAGGCGGC 400201 >seq137 Length=7816026 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/217 (70%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| || || || || || || || ||||| || ||| | || Sbjct 7638933 GATGCAGATGTTGGTAAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACCAAC 7638992 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| ||| || || ||||| || || ||||||| ||||||||||| Sbjct 7638993 GGATACAATAGAAAATGTACAAGCCAAAATCCAGGATAAGAAAGGAATTCCTCCCGATCA 7639052 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||| ||||| || | || |||| ||| ||| | ||| || || || Sbjct 7639053 GCAAAGACTGATTTTTGCTGGCA---AGTTGGAAGATGGGAGTACTTTGTTTGACTACAA 7639109 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 || | |||||| || | || || | |||||| || Sbjct 7639110 GATCCGAAAGGAGTCCATGCTTCATCTTGTGTTGAGA 7639146 >seq43265 Length=2440742 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || ||| | || ||| Sbjct 2202757 GATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCAAGGTCAGGCCCAG 2202698 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || || ||||||||||| || || || || ||| | || Sbjct 2202697 TGACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAGGAGGGCATCCCACCCAACCA 2202638 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| |||| |||||||| ||||||||||| ||| | | | || || ||||| Sbjct 2202637 GCAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTTTCTGACTATAA 2202578 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || || || || || || || ||||| |||| |||| || ||| Sbjct 2202577 CATCCAGAAAGAGTCCACCCTCCATCTGGTGCTGCGTGTGCGAGGCGGC 2202529 >seq50 Length=2506936 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 24707 CAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGAC 24766 |||||||| || || || || || || || | || | ||||| || || ||| || Sbjct 1731359 CAGATCTTCATGAAGACCCTGACGGGCAAGAAAATCTCCCTCGAGGTCGAGCCCAGTGAT 1731418 Query 24767 ACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAA 24826 || | || | || || || ||||||||||| | || || || || || || || Sbjct 1731419 ACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAGAAGGGCATCCCCCCTGACCAGCAG 1731478 Query 24827 CGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATT 24886 ||| |||| ||||| || ||||||||||||||| | | |||| || || ||||| Sbjct 1731479 CGTCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCGCACGCTGTCTGACTACAACATC 1731538 Query 24887 CAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGG 24927 || || || || || || ||| ||||| |||| |||| || Sbjct 1731539 CAGAAAGAGTCCACCCTCCACCTGGTGCTGCGTCTGCGAGG 1731579 >seq732 Length=901336 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || ||||||| || | || || |||||| | ||| | || ||| ||| Sbjct 811417 GATGCAGATTTTCGTTAAAACCCTTAAGGGGAAGACTATTGCCCTCAAGGTTGAA-CCAT 811359 Query 24763 CGAC-ACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 || ||| || ||| |||| | || ||| | | || |||||||| ||||| |||| Sbjct 811358 TGAATACAATACAAAATGTAAGAGCCAAAATCTAGGCTAAGGAAGGAATTCCTCCTGATC 811299 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | ||| |||| ||||| || || ||| |||| ||| | | | |||| || || | Sbjct 811298 AGTTACGACTGATTTTTGCTGGCAAGCAGTTGGAAGATAGGTGTACTTTGTCTGACTACA 811239 Query 24882 ACATTCAAAAGGAATCGAC 24900 |||||||||||| || || Sbjct 811238 GCATTCAAAAGGAGTCCAC 811220 >seq580 Length=5418713 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/210 (70%), Gaps = 9/210 (4%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| || || || || || || || ||||| || ||| | | Sbjct 3044902 GATGCAGATTTTCGTAAAAACCCTCACAGGGAAGACCATCACCCTCGAGGTTGAACCATC 3044961 Query 24763 CGACACAGTAGAAACGGTAAAA-CAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 || ||| ||||| |||||| | |||| |||| | || |||||||| |||||||||| Sbjct 3044962 GGATACAACAGAAAATGTAAAAGCCAAAG-TCCAGGGTAAGGAAGGAATTCCTCCCGATC 3045020 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | || | ||||| || |||||| |||| || | | | | || || | Sbjct 3045021 AGCA--GACTGTTTTTTGCTGGCAAACAGTTGGAAGACGGGCGTA----CTTTGACTACA 3045074 Query 24882 ACATTCAAAAGGAATCGACACTACA-CTTG 24910 |||| |||||||| || || || || |||| Sbjct 3045075 ACATCCAAAAGGAGTCCACGCTTCATCTTG 3045104 >seq460 Length=2238155 Score = 86.0 bits (94), Expect = 6e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| || || || || || || || || || || ||||| || || ||| Sbjct 438851 GATGCAGATCTTCATGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 438910 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || || | ||||||||| || || || | ||||| || Sbjct 438911 TGACACCATCGAGAATGTCAAGGCCAAAACCCAAGACAAGGAGGGCATCTCACCCGACCA 438970 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 || || ||||| ||||| || ||||||||||| ||| Sbjct 438971 GCAGCGCTTGATATTTGCGGGCAAACAGCTGGAAGAT 439007 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| || || || || || || || || || || ||||| || || ||| Sbjct 439568 GATGCAGATCTTCATGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 439627 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || || | ||||||||| || || || | ||||| || Sbjct 439628 TGACACCATCGAGAATGTCAAGGCCAAAACCCAAGACAAGGAGGGCATCTCACCCGACCA 439687 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || |||| ||||| || ||||||||||| ||| | | | || || || || Sbjct 439688 GCAGCGCCTGATATTTGCGGGCAAACAGCTGGAAGATGGCCGCACTGTCTCTGACTACAA 439747 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || | || || || || || ||||| || | |||| || ||| Sbjct 439748 CATCCAGAGAGAGTCCACCCTGCATCTGGTGCTGTGTCTGCGAGGTGGC 439796 >seq47707 Length=6282480 Score = 82.4 bits (90), Expect = 7e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||| ||| || | ||||| || || || || || || || ||||| || ||| | | Sbjct 22749 GATGCGGATTTTCGTAAAAACCCTCACAGGGAAGACCATCACCCTCGAGGTTGAACCATC 22690 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || | |||||| ||||||| || ||||| || || ||| |||| ||||| ||||| Sbjct 22689 GGATATGATAGAAAAGGTAAAAGCCAAAATCCAGGATAAGGAAAGAATTCCTCCTGATCA 22630 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGA 24855 ||| | |||| ||| || ||||||||||| Sbjct 22629 GCAAAGACTGATTTTTCATGGCAAACAGCTGGA 22597 Score = 82.4 bits (90), Expect = 7e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||| ||| || | ||||| || || || || || || || ||||| || ||| | | Sbjct 41679 GATGCGGATTTTCGTAAAAACCCTCACAGGGAAGACCATCACCCTCGAGGTTGAACCATC 41620 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || | |||||| ||||||| || ||||| || || ||| |||| ||||| ||||| Sbjct 41619 GGATATGATAGAAAAGGTAAAAGCCAAAATCCAGGATAAGGAAAGAATTCCTCCTGATCA 41560 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGA 24855 ||| | |||| ||| || ||||||||||| Sbjct 41559 GCAAAGACTGATTTTTCATGGCAAACAGCTGGA 41527 >seq309 Length=2273895 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || ||||| | || ||| Sbjct 961160 GATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGCTGAGCCCAG 961219 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || |||| | || | || ||||||||||| | || || || |||| || Sbjct 961220 GGATACCATAGAGAATGTGACGGCCAAAATCCAAGACAAGTAGGGCATCCCATCCGACCA 961279 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| |||| ||||| || ||||||||||| ||| | | |||| || || || Sbjct 961280 GCAGCGTCTGATATTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTGTCTGACTACAA 961339 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGC 24917 ||| || || || || || || || ||||| ||| Sbjct 961340 CATCCAGAAAGAGTCCACCCTGCATCTGGTGCTGC 961374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449612196210000