Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq436 82.4 6e-11 >seq436 Length=2687165 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 |||||||| || ||||| || ||| | || ||||| ||||| ||| |||| ||| || Sbjct 806822 AAAATGCAGATCTTTGTGAAGACTCTCACTGGCAAGACCATCACCCTCGAGGTGGAACCC 806763 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || || | | | || || ||||| || ||||||||| | || || Sbjct 806762 AGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCTGAC 806703 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || || || || | ||| || || |||||||| |||| | | || | | || ||| Sbjct 806702 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTAC 806643 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| ||||| ||||| ||||| |||| | | ||| |||| || Sbjct 806642 AACATTCAGAAAGAGTCTACTCTGCACCTGGTCCTGCGCCTGAGAGGTGG 806593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412586251019750