Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq204 87.8 2e-12 >seq204 Length=10348867 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 43867 TCCGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGT 43926 ||| ||||||||| ||||| || ||||||||||| || |||| || ||||| |||||| Sbjct 4048785 TCCTCTGGAAGGTCCCGTCCAGCGCGGCCACGATCACTGTCTTGCCGGCGTTGGCCATGG 4048726 Query 43927 CCTCGCAGAACTCCACTAGGTCG 43949 ||||||||||||||| | |||| Sbjct 4048725 TCTCGCAGAACTCCACGATGTCG 4048703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475739611110000