Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq42965 136 3e-27 seq139 129 4e-25 seq43265 125 5e-24 seq436 111 1e-19 seq460 107 1e-18 seq309 105 4e-18 seq459 100 2e-16 seq290 93.3 3e-14 >seq42965 Length=562198 Score = 136 bits (150), Expect = 3e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||||||||| ||||| ||||| || ||| ||| |||| Sbjct 302567 AGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCATCT 302626 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||| ||||||| | |||||||| | || | || |||||||| Sbjct 302627 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCT 302686 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| ||| |||||| || | ||| |||||| Sbjct 302687 TGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 302746 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || || || ||||||||||| ||||||||||| || Sbjct 302747 TTGCCAGTTAGGGTCTTTACGAAGATCTGCATTAT 302781 Score = 134 bits (148), Expect = 9e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | |||||| | ||| | || ||| ||||| ||||| ||||| || Sbjct 301184 CCTCCCCTCAAGCGCAGGACTAAGTGCAGAGTTGACTCTTTCTGGATGTTGTAGTCAGAC 301243 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| ||||| |||| |||||||| || || || ||||||| | |||||||| | || Sbjct 301244 AGGGTGCGCCCATCTTCCAGTTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGG 301303 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || |||||| | || | ||| ||| ||| || Sbjct 301304 ATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACC 301363 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 301364 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 301410 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||||||||| ||||| ||||| || ||| ||| |||| Sbjct 301427 AGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCATCT 301486 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||| ||||||| | |||||||| | || | || |||||||| Sbjct 301487 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCT 301546 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| ||| ||| || || | ||| |||||| Sbjct 301547 TGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTC 301606 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| || ||||||||||| Sbjct 301607 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 301638 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||||||||| ||||| ||||| || ||| ||| |||| Sbjct 301655 AGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCATCT 301714 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||| ||||||| | |||||||| | || | || |||||||| Sbjct 301715 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCT 301774 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| ||| ||| || || | ||| |||||| Sbjct 301775 TGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTC 301834 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| || ||||||||||| Sbjct 301835 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 301866 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||||||||| ||||| ||||| || ||| ||| |||| Sbjct 301883 AGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCATCT 301942 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||| ||||||| | |||||||| | || | || |||||||| Sbjct 301943 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCT 302002 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| ||| ||| || || | ||| |||||| Sbjct 302003 TGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTC 302062 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| || ||||||||||| Sbjct 302063 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 302094 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||||||||| ||||| ||||| || ||| ||| |||| Sbjct 302111 AGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCATCT 302170 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||| ||||||| | |||||||| | || | || |||||||| Sbjct 302171 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCT 302230 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| ||| ||| || || | ||| |||||| Sbjct 302231 TGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTC 302290 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| || ||||||||||| Sbjct 302291 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 302322 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||||||||| ||||| ||||| || ||| ||| |||| Sbjct 302339 AGTACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCATCT 302398 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || ||||| ||||||| | |||||||| | || | || |||||||| Sbjct 302399 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCT 302458 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| ||| ||| || || | ||| |||||| Sbjct 302459 TGGATCTTCGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTC 302518 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| || ||||||||||| Sbjct 302519 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 302550 >seq139 Length=10686148 Score = 129 bits (142), Expect = 4e-25 Identities = 162/221 (73%), Gaps = 10/221 (5%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | |||| ||| ||||| ||||| |||| || || |||| |||| Sbjct 400186 CAGCACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGCAGTCAGACAGCATGCGGCCATC 400127 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC------GGCACCCCCTC 34878 ||||| || || ||||| || ||||| || ||||||| || || | ||||| Sbjct 400126 CTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTGGTGGTGGGGGGGGATGCCCTC 400067 Query 34879 CTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACG 34936 |||||| | ||||| ||||| || || || | ||| |||||||||| || | | Sbjct 400066 CTTGTCTTGGATTTTGGCCTTGAC--ATTCTCCATGGTGTCACTGGCCTCGACCTCGAGG 400009 Query 34937 GTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||| ||||| |||||||| || ||||||||||| Sbjct 400008 GTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 399968 >seq43265 Length=2440742 Score = 125 bits (138), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| ||||| || | |||| ||| ||||| ||||||||||| || || |||| |||| Sbjct 2202544 CAGCACCAGATGGAGGGTGGACTCTTTCTGGATGTTATAGTCAGAAAGAGTGCGGCCATC 2202603 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || ||||| || ||||| || ||||||| | || | ||||||||||| Sbjct 2202604 TTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTTGGGTGGGATGCCCTCCTTGTC 2202663 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | ||||| ||||| || || || | ||| ||| | ||| | | ||| ||| Sbjct 2202664 TTGGATTTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCCTGACCTTGAGGGTGATG 2202721 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| |||||||| || ||||||||||| Sbjct 2202722 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 2202756 >seq436 Length=2687165 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || |||| | |||||||||||| | || ||| ||||||||||| ||||| || Sbjct 806593 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTAGACTCTTTCTGAATGTTGTAGTCAGAA 806652 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| || | |||||||| | || Sbjct 806653 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 806712 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || || || || | || || || || || || || | ||| ||| || | Sbjct 806713 ATGCCTTCTTTATCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGTTCCA 806770 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| || ||||| ||||| |||||||||||||| Sbjct 806771 CCTCGAGGGTGATGGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCAT 806819 Score = 105 bits (116), Expect = 4e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | || ||| ||||||||||| ||||| || Sbjct 806365 CCACCCCTCAGACGGAGGACCAGGTGCAGAGTAGACTCTTTCTGAATGTTGTAGTCAGAA 806424 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| || | ||||| || | || Sbjct 806425 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGATCAGGAGGG 806484 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || || || || | || || || || || || || | ||| ||| ||| | Sbjct 806485 ATGCCTTCTTTATCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCCA 806542 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 806543 CCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 806591 >seq460 Length=2238155 Score = 107 bits (118), Expect = 1e-18 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| ||||| || | |||| ||| |||| ||||| ||||| || | |||| |||| Sbjct 439781 CAGCACCAGATGCAGGGTGGACTCTCTCTGGATGTTGTAGTCAGAGACAGTGCGGCCATC 439722 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || || || || ||||| || |||||||| | | | ||||||||||| Sbjct 439721 TTCCAGCTGTTTGCCCGCAAATATCAGGCGCTGCTGGTCGGGTGAGATGCCCTCCTTGTC 439662 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | |||| ||||| || || || | ||| ||| |||||| || | ||| ||| Sbjct 439661 TTGGGTTTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 439604 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || |||||||| | ||||||||||| Sbjct 439603 GTCTTGCCTGTCAGGGTCTTCATGAAGATCTGCAT 439569 Score = 89.7 bits (98), Expect = 3e-13 Identities = 150/215 (70%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| ||||| || | |||| ||| || ||||| || || || | |||| |||| Sbjct 439060 CAGCACCAGATGCAGGGTGGACTC----TGGATGTTGTATTCAGAGACAGTGCGGCCATC 439005 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || || || || |||| || |||||||| | | | ||||||||||| Sbjct 439004 TTCCAGCTGTTTGCCCGCAAATATCAAGCGCTGCTGGTCGGGTGAGATGCCCTCCTTGTC 438945 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | |||| ||||| || || || | ||| ||| |||||| || | ||| ||| Sbjct 438944 TTGGGTTTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 438887 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || |||||||| | ||||||||||| Sbjct 438886 GTCTTGCCTGTCAGGGTCTTCATGAAGATCTGCAT 438852 >seq309 Length=2273895 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| ||||| || | |||| ||| ||||| ||||| ||||| || || |||| |||| Sbjct 961373 CAGCACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATC 961314 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || || || || ||||| || |||||||| || | |||| |||||| Sbjct 961313 TTCCAGCTGTTTGCCCGCAAATATCAGACGCTGCTGGTCGGATGGGATGCCCTACTTGTC 961254 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | ||||| | || |||| | || ||| ||| | || | ||| ||||| Sbjct 961253 TTGGATTTTGGCCGTCACATTCTCTATGGTATCCCTGGGCTCAGCCTCGAGGGTGATGGT 961194 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||||| |||||||| || ||||||||||| Sbjct 961193 CTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 961161 >seq459 Length=1943734 Score = 100 bits (110), Expect = 2e-16 Identities = 153/215 (71%), Gaps = 5/215 (2%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | ||| ||| ||||| || || |||| || || |||| |||| Sbjct 1019163 CAGCACCAAGTGCAGCGTGGACTCTTTCTGGAT-TTGTAGTTGGAGAGAGTGCGGCCATC 1019105 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || || || || ||||| |||||||||| | || | || |||||||| Sbjct 1019104 TTCCAGCTGTTTGCCTGCAAATATCAGATGTTGCTGGTCCCGTGGGATACCTTCCTTGTC 1019045 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | ||||| |||||| || || || | ||| ||| ||||| |||| ||| || Sbjct 1019044 TTGGATTTTGGTTTTGAC--ATTCTTGATGGTGTCACTGGGTTCGACCTCAAGGGTGGTG 1018987 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || | |||||||| | ||||||||||| Sbjct 1018986 GTCTTGCCGGGCAGGGTCTTCATGAAGATCTGCAT 1018952 Score = 100 bits (110), Expect = 2e-16 Identities = 153/215 (71%), Gaps = 5/215 (2%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | ||| ||| ||||| || || |||| || || |||| |||| Sbjct 1020667 CAGCACCAAGTGCAGCGTGGACTCTTTCTGGAT-TTGTAGTTGGAGAGAGTGCGGCCATC 1020609 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || || || || ||||| |||||||||| | || | || |||||||| Sbjct 1020608 TTCCAGCTGTTTGCCTGCAAATATCAGATGTTGCTGGTCCCGTGGGATACCTTCCTTGTC 1020549 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | ||||| |||||| || || || | ||| ||| ||||| |||| ||| || Sbjct 1020548 TTGGATTTTGGTTTTGAC--ATTCTTGATGGTGTCACTGGGTTCGACCTCAAGGGTGGTG 1020491 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || | |||||||| | ||||||||||| Sbjct 1020490 GTCTTGCCGGGCAGGGTCTTCATGAAGATCTGCAT 1020456 >seq290 Length=9387618 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||| | | |||| ||| ||| | || ||| |||| |||| ||||| || Sbjct 7872201 CCTCCCCTCTAGCGCAGGGCCAAGTGTAGAGTTGACTCTCTCTGGTTGTTGTAGTCGGAC 7872142 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| || || |||| |||| || || ||||| ||| ||| |||||||| | || Sbjct 7872141 AGGGTGTGCCCATCTCCCAGCTGTTTCCCGGCAGAGACTGGTCTCTGCTGGTCAGGGGGG 7872082 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTA--TCGATTCATTGGCCTCGA 34928 | || ||||| || | || || |||| | || || | | ||| ||| ||||| Sbjct 7872081 ATGCCTTCCTTATCTTGGATCTTCGCTTTGGC--ATTCTCAGTGGTGTCACTGGGCTCGA 7872024 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 | |||| ||| |||||||| || || ||||||| | ||||||||||| || Sbjct 7872023 CCTCAAGGGTGATGGTCTTGCCAGTCGGGGTCTTCATGAAGATCTGCATTAT 7871972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325491353914250