Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq48034 172 4e-37 seq133 168 5e-36 seq295 150 1e-30 seq45343 138 8e-27 seq190 136 3e-26 seq246 129 4e-24 seq560 107 1e-17 seq299 104 2e-16 seq47388 102 6e-16 seq663 95.1 9e-14 seq47081 87.8 1e-11 seq44580 87.8 1e-11 seq716 86.0 5e-11 >seq48034 Length=1339188 Score = 172 bits (190), Expect = 4e-37 Identities = 722/1123 (64%), Gaps = 25/1123 (2%) Strand=Plus/Minus Query 281759 ATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTT 281818 || ||||| || | ||| |||||||| |||||||| |||||||| || | | | | | Sbjct 640915 ATGGCTGCCTGGACAGCTGCACCATAAGCAACAGCCTCATCAGGGTTGATGCTCTTACTC 640856 Query 281819 AGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGA 281877 |||| || ||||||||||| | | || || | ||| | ||| || | || || || Sbjct 640855 AGTTCCTTCCCATTGAAAAAGTCTTGTAGCAGCT-TCTGAATCTTGGGGACACAAGTAGA 640797 Query 281878 TCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAAC 281937 || || || | ||||| ||||| | |||||| ||||| ||| | | ||| | | | Sbjct 640796 GCCACCCACCAGGACAATGTCATGGATCTGTGACTTATCTAGTCTGGCGTCCCGAAGAGC 640737 Query 281938 TTTTTCAAC-GGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAG 281996 ||| || || |||| || | | | | |||| ||||| | | ||||| ||| | Sbjct 640736 TTTCTCTACAGGGTCCAGGGTCCGA-CGGAACAGGTCTGCATTCAACTCTTCAAATCGGG 640678 Query 281997 CTCTAG-TAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA 282055 | || ||| | | || |||| |||||||| | | || || | ||||| | Sbjct 640677 CAACAGGTAATGGAGGTATAGAAATCGATTCCTTCATAGAGGGAGTCGATCTCAATACTG 640618 Query 282056 GTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGT 282115 | ||| || || || | | | ||||| |||||||| || || | || | || Sbjct 640617 GCTTGGGTGCTGGAGGAGTGGGTGTGCTTAGCCCGTTCACAAGCAGTGCGAAGGCGGCGG 640558 Query 282116 AAGGCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCT-CTTGAAATCTTCAACACA 282174 | ||| | ||| ||| | ||| | | | || | |||||| ||| ||| | Sbjct 640557 ACAGCTCTC-----TTG-TTCTCA-CTGATGTCCTTCTTATGCTTGAA--CTTAAACTCG 640507 Query 282175 CC-ATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAG 282233 | ||| || | ||||| | || ||||| | ||||| | |||| ||| | |||| Sbjct 640506 GCGATG--ACCATGCGATTGTTGAAGTCTTCTCTGCCCAAGTGCGTATCTCCAGCTGTAG 640449 Query 282234 CTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCAC 282293 ||| || | ||| ||||| |||| || | | | |||||| || ||||| | Sbjct 640448 ATCTGACCTCAAAACTCCCATCCTCAATAGTGAGGATGGACACATCAAAAGTACCACCTC 640389 Query 282294 CCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAA 282353 ||| | || ||||| || || |||| | ||||| || ||||| || |||| Sbjct 640388 CCAAGTTGAAGATAAGCACGTTTCTTTCAGCTCCAACCTTTTTGTCTAGACCGTAGGCAA 640329 Query 282354 AAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTG 282413 | ||||||||||| || || || || || | ||||| |||||||| || | | | Sbjct 640328 TGGTGGCAGCAGTTGGCTCGTTGATGATCCTAAGCACATTGAGACCAGCGATAGTCCTAG 640269 Query 282414 CATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 ||||||| || ||||| | || || || | ||||| || || ||||||| || |||| Sbjct 640268 CATCTTTGGTAGCTTGACACTGAGAGTCACTGAAATAAGCCGGCACAGTAACCACAGCAT 640209 Query 282474 CTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTG 282533 || || || |||| ||||| ||| ||| ||||| || | | || ||| | Sbjct 640208 TGGTAACAGTCTTCCCAAGGTAAGCTTCTGCAATTTCCTTCATCTTGGTCAGAACCATAG 640149 Query 282534 ATGAAATTTGTTCTGG--AGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATA 282591 |||| | | ||||| ||| |||| | ||||| ||| |||| | | Sbjct 640148 ATGACACCTCCTCTGGGTTGAA----ACTTGTCTCTCTTTTG-TATTCCACTTGCACCTT 640094 Query 282592 TGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACT 282651 || | || |||| | || | || ||||| | ||||| || || || ||| Sbjct 640093 GGGCCTGCCTGCATCATTCACCACCATGAAGGGCCAGTGCTTCATGTCAGACTGGACAAC 640034 Query 282652 TTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATT 282711 |||| ||| | ||||| | | || |||||||||| || ||||| || || Sbjct 640033 AGCATCATCAAACCTGCGTCCAATCAGATGCTTGGCATCAAAAACTGTGTTGGTGGGGTT 639974 Query 282712 AACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAAC 282771 |||||| | |||| ||| || ||||| |||||||| |||| || || ||||| | || Sbjct 639973 CACTGCAACCTGATTTTTTGCAGCATCACCAATCAGTCGTTCAGTGTCAGTAAAGGTGAC 639914 Query 282772 ATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTG 282831 ||| |||||| || | || || ||||| || ||||| || || ||||| |||| || Sbjct 639913 ATAACTTGGAGTGGTTCTGTTCCCCTGATCGTTAGCAATTATCTCTACTTTTCCATGCTG 639854 Query 282832 CCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCA 282874 | ||||| || || | || || || | |||||| ||| Sbjct 639853 GAAGACACCCACGCAGGAGTAGGTGGTGCCGAGATCAATGCCA 639811 >seq133 Length=10473765 Score = 168 bits (186), Expect = 5e-36 Identities = 420/636 (66%), Gaps = 4/636 (1%) Strand=Plus/Minus Query 282189 GATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA 282248 |||| || |||||||| | ||||| | |||| ||| | ||| | | || | ||| Sbjct 9784886 GATTGTCGAAATCTTCTCTGCCCAAGTGTGTATCTCCAGCTATAGATTTGACCTCAGAAA 9784827 Query 282249 GTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAA 282308 |||||| |||| || | | | |||||| || ||||| |||| ||||| || | Sbjct 9784826 TTCCATCCTCAATAGTGAGGATGGACACATCAAAAGTGCCACCTCCCAAGTCAAAGATCA 9784767 Query 282309 GTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368 | ||||| |||| | ||||| || ||||| || |||| ||||||||||||| Sbjct 9784766 GCACATTTCTTTCAGCTCCAACCTTTTTGTCTAGACCGTAGGCAATGGCAGCAGCAGTTG 9784707 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 | || || ||||| || | ||||| |||||||| || | || |||||||| || |||| Sbjct 9784706 GCTCGTTGATAATCCTAAGCACATTGAGACCAGCGATAGTCCCGGCATCTTTGGTAGCTT 9784647 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTC 282488 | || || || || ||||| ||||| ||||||| || |||| || || || | Sbjct 9784646 GATGCTGAGAGTCATTGAAATAAGCAGGCACAGTAACCACAGCATTGGTAACAGTCTTCC 9784587 Query 282489 CAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 282548 ||| ||||| ||| ||| ||||| || | || ||| ||||| | | |||| Sbjct 9784586 CAAGTTAAGCTTCTGCAATTTCCTTCATCTTGGCCAGAACCATAGATGATACCTCCTCTG 9784527 Query 282549 G--AGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAAC 282606 | |||| || |||| || || ||| ||||| | | || | | Sbjct 9784526 GGTAGAAACTT--TTGGTCTCTCCTTTGTATTCTACTTGCACCTTGGGCCTGCCTGTGTC 9784469 Query 282607 ATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATC 282666 ||| | || | || ||||| | ||||| || || || ||| |||| ||| Sbjct 9784468 ATTCACCACCATGAAGGGCCAGTGCTTCATGTCAGACTGGACAACAACATCATCAAACCT 9784409 Query 282667 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATA 282726 | ||||| | || || ||||| |||| |||||||| || || | |||| | |||| Sbjct 9784408 GCGTCCAATGAGACGCTTGGCATCGAAAACTGTATTGGTGGGGTTCATTGCAACCTGATT 9784349 Query 282727 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 282786 ||| || | ||| || ||||| |||| || || ||||| | ||||| |||||| || Sbjct 9784348 TTTTGCAGAATCACCGATCAGTCGTTCGGTGTCAGTAAAGGCGACATAGCTTGGAGTGGT 9784289 Query 282787 GCGATTACCTTGATCATTCGCAATAATTTCAACTTT 282822 | || || ||||| || ||||| || || ||||| Sbjct 9784288 TCTGTTCCCCTGATCGTTGGCAATTATCTCTACTTT 9784253 >seq295 Length=1302164 Score = 150 bits (166), Expect = 1e-30 Identities = 466/709 (66%), Gaps = 33/709 (5%) Strand=Plus/Plus Query 282188 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 282247 ||||| ||||| ||||| || ||||| | |||| ||| | |||| | | || | ||| Sbjct 110505 CGATTGTCAAAGTCTTCTCCACCCAAGTGTGTATCTCCAGCTGTAGATTTGACCTCAAAA 110564 Query 282248 AGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATA 282307 | |||||| |||| || | | | |||||| || | || |||| ||| || || Sbjct 110565 ACTCCATCCTCAATAGTGAGGATGGACACATCAAAAGTGCTACTTCCCAAATCGAAGATC 110624 Query 282308 AGTACATTCATTTCTTTGTCTTGG---TTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 || ||||| ||| || || ||||| |||| |||||| ||| ||||||||| Sbjct 110625 AGCACATT--TTTTTTCAGCTCCAACCTTTTTGTCAAAACCATAGACAATGGCAGCAGCA 110682 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 |||||||||| || || || | ||||| ||||||||||| |||| |||||||| || Sbjct 110683 ATTGGTTCATTGATGATCCTAAGCACATTGAGACCAGCAATAGTTCCAGCATCTTTGGTA 110742 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCT 282484 || || || || || |||||||| || | |||||||| || |||| || || Sbjct 110743 GCCTGATGCTGAGAGTCATTAAAATAAGCCAGCACAGTAATCACAGCATTGGTAACAGTC 110802 Query 282485 TTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 282544 || |||| ||| || ||| ||| |||| | | | || ||| ||||| | || Sbjct 110803 TTCCCAAGATAGGCTTCTGCAATTTCCTTCACCATGGTCAGAACCATAGATGACACTTCC 110862 Query 282545 TCTGG--AGAATATTGCTTGGAT-TCATTTTGATATGATACTT-----CAAAATATG--- 282593 ||||| |||| ||| ||| | |||||| ||| ||||| | || || Sbjct 110863 TCTGGGTAGAA-ATTTTTTGTCTGTCATTT--GTATTCTACTTGCACCCGAAGCCTGCCT 110919 Query 282594 GT-TTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTT 282652 || | ||| || ||| | | || ||||| | |||||||| || || ||| Sbjct 110920 GTGTCATT--CACCATCA-------TGAAGGGCCAGTGCTTCATATCAGACTGGACAACA 110970 Query 282653 TGGTCATTAAAATCT-CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATT 282711 ||| | | |||| | ||||| | | || |||| |||| | | ||||| || || Sbjct 110971 GCATCA-TCAGATCTGCATCCAATCAGATGCTTGGCATTAAAA--ACTGTTGGTGGGGTT 111027 Query 282712 AACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAAC 282771 | | || | |||| || | ||||| | | || ||| || || ||||| | ||| Sbjct 111028 CATTACAACCTGATTCTTTGTAGCATCATCCACCACTCATTCGGTATCGGTAAAGGCAAC 111087 Query 282772 ATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTG 282831 ||| ||||| || | || || |||||||| ||||| || || ||||| |||| | Sbjct 111088 ATAGCTTGGAGCGGTTCTGTTCCCCTGATCATTGGCAATTATCTCTACTTTTCCATGCTA 111147 Query 282832 CCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 282880 | ||||| ||||| | || || || | |||||| ||||| ||| Sbjct 111148 GAAGACACCCACACAGGAGTAGGTGGTACCAAGATCAATGCCAATTGCA 111196 >seq45343 Length=1564474 Score = 138 bits (152), Expect = 8e-27 Identities = 359/545 (66%), Gaps = 7/545 (1%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || ||||| || |||| ||||||||||| || | || || || || | ||| Sbjct 898579 TTTTTGTCTAGACCGTAGGCAATGGCAGCAGCAGTCGGCTAGTTGATGATCCTAAGCACA 898520 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || |||||||| || | || |||||||| || ||||| | || || || || ||||| Sbjct 898519 TTGAGACCAGCGATAGTCCCAGCATCTTTGGTAGCTTGACGCTGAGAGTCATTGAAATAA 898460 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511 || | ||| ||| || |||| || || ||||||| |||| ||| ||| Sbjct 898459 GCCAGCACATTAACCACAGCATTGGTAACAGTCTTTCCAAGGCAAGC---TGCAATTTCC 898403 Query 282512 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--AGAATATTGCTTGGATTCAT 282569 ||||| || | | || ||||||||| | | ||||| |||| || |||| || Sbjct 898402 TTCATCTTGGTCAGAACCATTGATGACACCTCCTCTGGGTAGAAACTT--TTGGTCTCTC 898345 Query 282570 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAAT 282629 || ||| |||| | | || | || |||| | || | || ||||| | Sbjct 898344 CTTTGTATTCCACTTGCACCTTGGGCCTGCCTGCATCATTCACTACCATGAAGGGCCAGT 898285 Query 282630 ATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCAT 282689 ||||| || || || ||| |||| ||| | | ||| | | || |||| Sbjct 898284 GCTTCATGTCAGACTGGACAACAGCATCATCAAACCTGCGTCTAATCAGATGCTTGGCAT 898225 Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 |||||| || ||||| ||||| | || | |||| ||| || ||||| |||||||| Sbjct 898224 CAAAAACTGTGTTGGTGGGATTCATTGTAATCTGATTTTTTGCAGCATCACCAATCAGTC 898165 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 || | || || ||||| | || ||| |||||| || | || || ||||| || |||| Sbjct 898164 GTCCGGTGTCAGTAAAGGCAATATAGCTTGGAGTGGTTCTGTTCCCCTGATCGTTGGCAA 898105 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 | || || ||||| |||| || | ||||| ||||| | || || || | ||||| Sbjct 898104 TTATCTCTACTTTTCCATGCTGGAAGACACCCACACAGGAGTAGGTGGTGCCGAGATCAA 898045 Query 282870 TACCA 282874 | ||| Sbjct 898044 TGCCA 898040 >seq190 Length=19269909 Score = 136 bits (150), Expect = 3e-26 Identities = 456/696 (66%), Gaps = 18/696 (3%) Strand=Plus/Minus Query 282189 GATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA 282248 |||| ||||| ||||| || ||||| | || | ||| | |||| | | || | |||| Sbjct 18906616 GATTGTCAAAGTCTTCTCCGCCCAAGTGTGTCTCTCCAGCTGTAGATATGACCTCAAAAA 18906557 Query 282249 GTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAA 282308 |||||| |||| || | | | |||||| || | ||| |||| | || | | | Sbjct 18906556 TTCCATCCTCAACAGTGAGGATGGATACATCAAAAGTGCTACCTCCCAAGTTAAGA-TCA 18906498 Query 282309 GTACATTCATTTCTTTGTCTTGG---TTTTTATCAAGACCATACGCAAAAGCAGCAGCAG 282365 ||||||| |||| || | |||||||| | |||||| |||| | ||| ||||| Sbjct 18906497 GTACATTTCTTTCAG---CTCGAAACTTTTTATCTAAACCATAGGCAATAACAGGAGCAG 18906441 Query 282366 TTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 282425 |||| ||||| |||| || || ||||| ||||||||||| |||| |||||||| || | Sbjct 18906440 TTGGCTCATTGGTAATCCTAAATACATTGAGACCAGCAATAGTTCCAGCATCTTTGGTAG 18906381 Query 282426 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTT 282485 | || | || || || | |||||| || | |||| || | | ||| || || | Sbjct 18906380 CCTGATTCTGAGAGTCATAAAAATAAGCCAGTACAGCAACCATGACATTGGTAACAGTCT 18906321 Query 282486 TTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 282545 | |||| ||| || || ||| ||||| || | | || ||| ||||| | | | Sbjct 18906320 TCCCAAGATAGGCTTCTGTAATTTCCTTCATCTTGGTCAGAACCATAGATGACACCTCCT 18906261 Query 282546 CT--GGAGAATATTGCTTGGAT-TCATTTTGATATGATACTTCAAAATATGGTTTATTAC 282602 || | |||| | | ||| | || |||| ||| ||||| | || || | Sbjct 18906260 CTAGGTAGAA-ACTTTTTGTCTCTCCTTTT--TATTCTACTTGCACATTGGGCCTGCCTG 18906204 Query 282603 CAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAA 282662 || | || | || | || || || | || ||||| | || ||| || | | Sbjct 18906203 CATCGTTCACCACCATGAAGGGTCAGTGCTTTATATCATACTGGACAACAACAACA-TCA 18906145 Query 282663 AATCTCT-ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCT 282721 ||||| | | ||| || | || || ||||||| || ||||| || || | |||| || Sbjct 18906144 AATCTGTGTCTAATCAAATGCTTGGCGTCAAAAACTGTGTTGGTGGGGTTCATTGCAACT 18906085 Query 282722 TGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGA 282781 |||| ||| | || || ||||||| || || || ||||| | |||||| |||| Sbjct 18906084 TGATTTTTTGTAGCGTCACCAATCA-TCATTTGGTATCAGTAAAGGTAACATAGCTTGGA 18906026 Query 282782 GT-TGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACC 282840 || || | || || |||| || ||||| || || ||||| | | || | ||||| Sbjct 18906025 GTGGGTTTGGTTCCCCTGATTGTTGGCAATTATCTCTACTTTTCTGTGCTGGAAGACACC 18905966 Query 282841 TACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 282876 |||||| | ||| | |||| |||||| ||||| Sbjct 18905965 CACACAA-GAGTAGTGGCACCTAGATCAATGCCAAT 18905931 >seq246 Length=8872645 Score = 129 bits (142), Expect = 4e-24 Identities = 458/700 (65%), Gaps = 28/700 (4%) Strand=Plus/Minus Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 ||||| ||||| || |||| | |||| ||| | |||| ||| || | |||| |||| Sbjct 3045358 TCAAAGTCTTCTCCATCCAAGTGTGTATATCCAGCTGTAGATCTGACCTCAAAAATTCCA 3045299 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG--TA 282311 || |||| || | | || || ||| || ||||| ||| | |||||| || | Sbjct 3045298 TCGTCAATAGTGAGGATAGATACCTCAAAAGTGCCACCTTCCAAGTAAAAAATCAGGTTT 3045239 Query 282312 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371 | |||| || |||| | | || | || || ||| ||||||||||||||| | Sbjct 3045238 CTTTCAGCTCCAA-TCTT----TCTGTCTAAACGGTAGACAATAGCAGCAGCAGTTGGCT 3045184 Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 282431 ||| ||| || | ||||| ||||||||||| |||| |||||||| || | || | Sbjct 3045183 CATGGTTAACACTAAGCACATTGAGACCAGCAATGGTTCCAGCATCTTTGGTAGTCTGAC 3045124 Query 282432 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAA 282491 | || || || |||||||| || | ||||||| ||||||| || || | |||| | Sbjct 3045123 TCTGAGAGTCATTAAAATAAGCTGACACAGTAACCACGGCAT-TGCTAACAGTCTTCCCA 3045065 Query 282492 TATAAGCGCTTGCTG---TTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 282548 | || |||| ||| ||| |||||| | | | || ||| |||| || | | || Sbjct 3045064 TGGTAG-GCTT-CTGAGATTTCTTTCATCTCGGTCAGAACCATAAATGACATCTCCTTTG 3045007 Query 282549 GAGA-ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACA 282607 || | | | | ||| | |||| ||| ||||| | | || | | || | Sbjct 3045006 GACAGAAACTTTTTGTCTCTCCTTTG-TATTCTACTTGTATCTTGGGACTGTCTGCATCG 3044948 Query 282608 TTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 282667 || | || | || ||||| | |||||||| || || ||| ||| | |||||| Sbjct 3044947 TTCACCACCATGAAAGGCCAGTGCTTCATATCAGACTGGACAACAGCATCA-TCAAATCT 3044889 Query 282668 CTA-CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATA 282726 || ||||| | | || |||||||||| |||||||| || || | |||| | |||| Sbjct 3044888 GTATCCAATCAGACACTTGGCATCAAAAACTGTATTGGTGGGGTTCATTGCAACCTGAT- 3044830 Query 282727 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATA---TGATGGAGT 282783 ||| || |||| |||||| |||| || || | || | ||||| || | ||| Sbjct 3044829 TTTTGCAACATCACCAATC----GTTCGGTATCAGGTAAGGTGACATAGCTTGTTACAGT 3044774 Query 282784 TGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTAC 282843 | || || | |||||||| ||||| || | ||||| ||| || | | || || Sbjct 3044773 T---CGGTTCTCCTGATCATTGGCAATTATCTTTACTTTTACATGCTGGAAGATACTCAC 3044717 Query 282844 ACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCAATT 282883 |||| | || || |||| |||||| |||| ||| || Sbjct 3044716 ACAAGAGTAGGTGGTACCTAGATCAATGCCAACTGCAGTT 3044677 >seq560 Length=4172644 Score = 107 bits (118), Expect = 1e-17 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 400295 AATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTA 400354 ||||||| || || |||| |||||||| ||||| ||||| || ||| | || || ||| Sbjct 1783216 AATGTACGCTCATCCTGACTGAGGGAGACTCAGCCAAAACTTTGGCTGTTTCAGGTCTTG 1783157 Query 400355 ATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTA 400414 ||| |||| |||||| | |||||||||||||| |||||||||||| | | |||||| Sbjct 1783156 GTGTGGTTGGTAGAGATAAATATGGAGTTTTCCCTCTTAGAGGAAAAATACTCAATGTTC 1783097 Query 400415 GGGATGCTAGTCCTaaa 400431 | || ||| || |||| Sbjct 1783096 GAGAAGCTTCTCATAAA 1783080 >seq299 Length=5035708 Score = 104 bits (114), Expect = 2e-16 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || ||||| || |||| ||||||||||| || || || ||||| || | ||| Sbjct 3422889 TTTTTGTCTAGACCGTAGGCAATGGCAGCAGCAGTCGGCTCGTTGATAATCCTAAGCACA 3422948 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || |||||||| || | || |||||||| || ||||| | || || ||||| ||||| Sbjct 3422949 TTGAGACCAGCGATAGTCCCAGCATCTTTGGTAGCTTGACGCTGAGAGTCGTTGAAATAA 3423008 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 || || ||||||| || |||| Sbjct 3423009 GCTGGCACAGTAACCACAGCAT 3423030 >seq47388 Length=1147945 Score = 102 bits (112), Expect = 6e-16 Identities = 190/278 (68%), Gaps = 1/278 (0%) Strand=Plus/Plus Query 282188 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 282247 ||||| |||| ||||| || ||||| | |||| ||| | |||| | | | | ||| Sbjct 607294 CGATTGCCAAAGTCTTCTCCGCCCAAGTGTGTATCTCCAGCTGTAGATTTGATCTCAAAA 607353 Query 282248 AGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATA 282307 | |||||| || | || | | | |||||| || ||||| |||| | || || Sbjct 607354 ATTCCATCCTCCATAGTGAGGATGGACACATCAAACGTGCCACCTCCCAAGTGGAAGATC 607413 Query 282308 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 282367 || ||||| |||| | ||||| || | |||||| |||| |||||||||||| Sbjct 607414 AGCACATTTCTTTCAGCTCCAACCTTTTTGTCTAAACCATAGGCAATGGCAGCAGCAGTT 607473 Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 || ||||| || || || | |||| ||||||||| | |||| |||||||| || || Sbjct 607474 GGCTCATTGATGATCCTAAGCACATAGAGACCAGCATTAGTTCCAGCATCTTTGGTAGCC 607533 Query 282428 TGTCTTTGTGAATCGTT-AAAATATGCAGGAACAGTAA 282464 | || || || || |||||| || || ||||||| Sbjct 607534 GGATGCTGAGAGTCATTAAAAATAAGCTGGCACAGTAA 607571 >seq663 Length=3437288 Score = 95.1 bits (104), Expect = 9e-14 Identities = 196/290 (68%), Gaps = 14/290 (5%) Strand=Plus/Plus Query 281265 TTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCTGCTTCTTCAAATT 281324 |||| || |||||| | | ||||| | | || ||| || ||| | || |||| | Sbjct 2897563 TTTCCAACTCATTTCTGGTATCAATACGCTCCTTGAGCTTTTTGTCTTCCTCGGCAAACT 2897622 Query 281325 CTTTAGCTTCTCTAATCATTCTCTCAATTTGATCT----TCAGAGAATCTTCCGCGATTA 281380 | ||| || ||| ||| || ||||||| ||| |||| || || | | | Sbjct 2897623 TCTCAGCATCATTAACCATCCTTTCAATTTCTTCTGGTGTCAGGCGATTTT----GGTCA 2897678 Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTT---TGTTGATTTATCAGCGGCAGTCACATTA 281437 || ||||| || || || || |||||| ||| || || |||| ||||| | Sbjct 2897679 TTGGTAATTGTGATCTTATT---TTTGTTCCCTGTACCCTTGTCTTCGGCTGTCACTCGA 2897735 Query 281438 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 281497 ||||| ||||| |||| | ||||||||||||||||| |||||||| || | ||||| Sbjct 2897736 AGAATGCCATTTACATCTATCTCAAATGTGACTTCAATCTGAGGGACTCCGCGGGGAGCA 2897795 Query 281498 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGT 281547 || || || || || || |||||||||||| | ||||||||| || Sbjct 2897796 GGAGGAATTCCAGTCAGATCGAATGTTCCCAGAAGGTGATTATCTTTTGT 2897845 >seq47081 Length=2077456 Score = 87.8 bits (96), Expect = 1e-11 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || || |||| |||| ||||| ||||||| ||||| ||||| || | ||| Sbjct 1900293 TTTTTGTCTAGTGCATAGGCAATCGCAGCCTCAGTTGGCTCATTGATAATCCTAAGCACA 1900234 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 | |||||||||| |||| ||| |||| || || || | | || || ||||||||| Sbjct 1900233 CTGGGACCAGCAATGCTTCTAGCAACTTTGGTAGCCTGACACAGAGAGTCATTAAAATAT 1900174 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511 || | |||||||| ||||| || || || |||| || || | ||| ||| Sbjct 1900173 GCTGTCACAGTAATCTTGGCATTAGTAACAGTCTTCCCAAGGTAGGCTCCTGCGATTTTC 1900114 Query 282512 TTCATTTT 282519 ||||| || Sbjct 1900113 TTCATCTT 1900106 >seq44580 Length=1790556 Score = 87.8 bits (96), Expect = 1e-11 Identities = 218/329 (66%), Gaps = 9/329 (3%) Strand=Plus/Minus Query 400298 GTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAATG 400357 |||| || || |||| |||||||| | | || ||| || | | | || || | | || Sbjct 1368970 GTACACTCATCCTGACTGAGGGAGACTGACCTGAAAATTTGGTTGTTTCAGGTGTCAGTG 1368911 Query 400358 TTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGG 400417 | |||| |||||| | |||||||||||||| ||| ||| |||| | | | |||| | | Sbjct 1368910 TGGTTGGTAGAGATAAATATGGAGTTTTCCCTCTTCGAGAAAAAATACTCAGTGTTTGAG 1368851 Query 400418 ATGCTAGTCCTaaaaaaaTTGCCGATAATGAGGAAATTACAGCAATCaaaaaaaTTGTTG 400477 | ||| | |||| | || | || |||| |||||| |||| || ||||| | Sbjct 1368850 AAGCTTCTTATAAACAGATCACGGAAAATGCCAAAATTAACAATATCATCAAGATTGTGG 1368791 Query 400478 GACTT--GAACAAGGAAAAGT-TTATGATGA------TCTCAAAGGTTTACGATATGGTA 400528 | ||| | ||||| |||| | | ||||||| || || ||| | ||||| | Sbjct 1368790 GTCTTCAGTACAAGAAAAACTATGATGATGAAGATTCACTGAAGACTTTTTGCTATGGGA 1368731 Query 400529 GTATTATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCATGA 400588 || |||||| | ||||| || || | | |||||||||||| || | || | Sbjct 1368730 AGATAATGATTATGATAGATCAGGACCAAGACAGATCCCATATCAAAGGCTTGCTGATTA 1368671 Query 400589 ATTTTATCCATTGTTTTTGGCCATCTCTT 400617 | |||| |||| |||||| |||||| Sbjct 1368670 ACTTTACCCATCAAAATTGGCCCTCTCTT 1368642 >seq716 Length=11497392 Score = 86.0 bits (94), Expect = 5e-11 Identities = 124/173 (72%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 282250 TCCATCTTCA--AGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATA 282307 |||||| ||| ||||| |||||| |||||| || ||||| |||| |||||||| Sbjct 8900385 TCCATCCTCAGTAGAGAGAAAAGAC--ACATCAAAAGTGCCACCTCCCAAGTCAAAAATC 8900328 Query 282308 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 282367 | | || |||| | ||||| || | ||||| | || |||| |||||||| Sbjct 8900327 AAGATGTTTCTTTCAGCTCCAACTTTTTTGTCTAAGCCATAGGTAATAGCAACAGCAGTT 8900268 Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTT 282420 || |||||||||||||| | |||| ||| ||||||| ||| |||||||| Sbjct 8900267 GGCTCATTAATAATTCTAAGCTCATTGAGATCAGCAATAGTTCAAGCATCTTT 8900215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3738138789469500