Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_024366.1 Length=62661 Score E Sequences producing significant alignments: (Bits) Value seq46163 187 1e-42 >seq46163 Length=1271 Score = 187 bits (206), Expect = 1e-42 Identities = 196/258 (76%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 25026 ATGTCGGAATATCAAGCCGCGCACCGGCGTGCGTGCTGCGCAGCAATCACAGCGCTCGGC 25085 ||||| ||||| ||||| ||||||| || || |||||||| |||||||| || |||||| Sbjct 227 ATGTCCGAATACCAAGCACCGCACCGACGCGCCTGCTGCGCCGCAATCACCGCACTCGGC 286 Query 25086 AACCGCATCGGCCTGTACTCGGGTGCTACCCGCGTCGGCACCTTGTTCGCAGATACCACG 25145 ||||| ||||| || | | | ||| | ||||| || |||||| | ||| || ||||| Sbjct 287 AACCGAATCGGGCTATTCGCCGGTTCCACCCGGGTAGGCACCGCCTACGCCGACACCACC 346 Query 25146 TGGGGCACGCCGGCCGACGTCACCGAGTCGGGCGTTGACAAAGCGCAGTCGACCGGTTCG 25205 |||| ||| || | ||| |||||||| || ||| | ||||| || || ||||| ||| Sbjct 347 TGGGCCACCCCAGTCGATGTCACCGAATCCGGCATCGACAAGGCATCATCCACCGGCTCG 406 Query 25206 ACAGTGACCATCACCGTACCTGGCGGCACCGTGGCGAACGGCGCAACGATTGACCGTTAC 25265 || |||||| | |||||||||||||||||||| |||||| | ||| |||| ||| Sbjct 407 CTGGTAACCATCTCGGTACCTGGCGGCACCGTGGCCAACGGCACGGTGATCAACCGGTAC 466 Query 25266 GGGGTGTTCAACGGCACG 25283 || ||| | ||| || || Sbjct 467 GGCGTGGTGAACCGCGCG 484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200266455406500