Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq398 109 7e-19 seq40807 105 9e-18 seq502 105 9e-18 seq104 105 9e-18 seq42965 104 3e-17 seq40042 104 3e-17 seq86 104 3e-17 seq741 95.1 2e-14 seq490 95.1 2e-14 seq44707 86.0 8e-12 seq89 82.4 1e-10 >seq398 Length=3125954 Score = 109 bits (120), Expect = 7e-19 Identities = 79/90 (88%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 8641 GGCTGCCGATGC-CTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGG 8699 ||||||| || |||| ||||||||||||||||||| ||||| |||| ||||| | ||| Sbjct 188919 GGCTGCCTATCAGCTTACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGG 188978 Query 8700 GAGACCGGGGTTCGATTCCCCGACGAGGAG 8729 ||||||||||||||||||||||||| |||| Sbjct 188979 GAGACCGGGGTTCGATTCCCCGACGGGGAG 189008 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 188937 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 188996 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 188997 CCCGACGGGGAG 189008 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 189008 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 188949 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 188948 TACTAACGAGGA 188937 >seq40807 Length=1500189 Score = 105 bits (116), Expect = 9e-18 Identities = 71/78 (91%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 927204 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 927263 Query 11789 CCCGACGAGGAGGGAGGT 11806 ||||||| |||| ||||| Sbjct 927264 CCCGACGGGGAGTGAGGT 927281 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 930311 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 930370 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 930371 CCCCGACGGGGAG 930383 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 927204 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 927263 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 927264 CCCGACGGGGAG 927275 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 930312 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 930371 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 930372 CCCGACGGGGAGG 930384 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 927276 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 927217 Query 139412 ATACTAACGAGGAT 139425 |||||||||||||| Sbjct 927216 ATACTAACGAGGAT 927203 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 930383 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 930324 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 930323 TACTAACGAGGA 930312 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| ||| ||||| | | |||||||||||||| ||| Sbjct 959912 TTCCTCGTTAGTATAGTGGTGAGTATCCCCACCTGTCACGCAGGAGACCGGGGTTCAATT 959853 Query 8717 CCCCGACGAGGAG 8729 ||| |||| |||| Sbjct 959852 CCCTGACGGGGAG 959840 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| ||| ||||| | | |||||||||||||| |||| Sbjct 959911 TCCTCGTTAGTATAGTGGTGAGTATCCCCACCTGTCACGCAGGAGACCGGGGTTCAATTC 959852 Query 11789 CCCGACGAGGAGG 11801 || |||| ||||| Sbjct 959851 CCTGACGGGGAGG 959839 >seq502 Length=8891789 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 8082339 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 8082398 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 8082399 CCCCGACGGGGAG 8082411 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 8082340 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 8082399 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 8082400 CCCGACGGGGAGG 8082412 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 8082411 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 8082352 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 8082351 TACTAACGAGGA 8082340 >seq104 Length=6237175 Score = 105 bits (116), Expect = 9e-18 Identities = 74/82 (90%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 11722 TAAC-CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGG 11779 |||| || |||||||||||||||||||| ||||| |||| ||||| | |||||||||||| Sbjct 48245 TAACGCCTGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGG 48304 Query 11780 GTTCGATTCCCCGACGAGGAGG 11801 |||||||||||||||| ||||| Sbjct 48305 GTTCGATTCCCCGACGGGGAGG 48326 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 31558 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 31617 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 31618 CCCGACGGGGAG 31629 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 48254 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 48313 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 48314 CCCGACGGGGAG 48325 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 31558 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 31617 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 31618 CCCGACGGGGAG 31629 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 31629 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 31570 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 31569 TACTAACGAGGAT 31557 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 48325 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 48266 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 48265 TACTAACGAGGA 48254 >seq42965 Length=562198 Score = 104 bits (114), Expect = 3e-17 Identities = 70/77 (91%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 || |||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||| Sbjct 314243 CCTGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCG 314184 Query 11785 ATTCCCCGACGAGGAGG 11801 ||||||||||| ||||| Sbjct 314183 ATTCCCCGACGGGGAGG 314167 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 314239 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 314180 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 314179 CCCGACGGGGAG 314168 Score = 104 bits (114), Expect = 3e-17 Identities = 68/74 (92%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 317406 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 317347 Query 11788 CCCCGACGAGGAGG 11801 |||||||| ||||| Sbjct 317346 CCCCGACGGGGAGG 317333 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 317405 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 317346 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 317345 CCCGACGGGGAG 317334 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 314168 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 314227 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 314228 TACTAACGAGGA 314239 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 317334 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 317393 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 317394 TACTAACGAGGA 317405 >seq40042 Length=288415 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 3939 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 3880 Query 8718 CCCGACGAGGAGCAG 8732 ||||||| |||| || Sbjct 3879 CCCGACGGGGAGGAG 3865 Score = 104 bits (114), Expect = 3e-17 Identities = 68/74 (92%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 3940 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 3881 Query 11788 CCCCGACGAGGAGG 11801 |||||||| ||||| Sbjct 3880 CCCCGACGGGGAGG 3867 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 97003 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 97062 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 97063 CCCGACGGGGAG 97074 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 118419 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 118478 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 118479 CCCGACGGGGAG 118490 Score = 102 bits (112), Expect = 1e-16 Identities = 69/76 (91%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 97003 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 97062 Query 11789 CCCGACGAGGAGGGAG 11804 ||||||| ||||| || Sbjct 97063 CCCGACGGGGAGGCAG 97078 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 118419 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 118478 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 118479 CCCGACGGGGAGG 118491 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 81186 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 81245 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 81246 CCCGACGGGGAG 81257 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 97074 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 97015 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 97014 TACTAACGAGGAT 97002 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 118490 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 118431 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 118430 TACTAACGAGGAT 118418 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 3868 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 3927 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 3928 TACTAACGAGGA 3939 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 81186 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 81245 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 81246 CCCGACGGGGAG 81257 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 81257 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 81198 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 81197 TACTAACGAGGAT 81185 >seq86 Length=11366711 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||||||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1785236 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1785295 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1785296 CCCGACGGGGAG 1785307 Score = 95.1 bits (104), Expect = 2e-14 Identities = 68/77 (88%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 139349 ACAA-CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAAC 139407 |||| |||| ||||||||| | |||||||||||||||| | |||| |||||||| |||| Sbjct 1785312 ACAATCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAAC 1785253 Query 139408 CACTATACTAACGAGGA 139424 ||||||||||||||||| Sbjct 1785252 CACTATACTAACGAGGA 1785236 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1785236 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1785295 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 1785296 CCCGACGGGGAG 1785307 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||| |||||||||| ||||| ||| ||||| | ||||||| ||||||||||||| Sbjct 8122773 TCCTCGTTTGTATAGTGGTGAGTATCCCCTCCTGTCACGCGGGAGAGCGGGGTTCGATTC 8122714 Query 8718 CCCGACGAGGAGC 8730 || |||| ||||| Sbjct 8122713 CCGGACGGGGAGC 8122701 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||| |||||||||| ||||| ||| ||||| | ||||||| ||||||||||||| Sbjct 8122773 TCCTCGTTTGTATAGTGGTGAGTATCCCCTCCTGTCACGCGGGAGAGCGGGGTTCGATTC 8122714 Query 11789 CCCGACGAGGAG 11800 || |||| |||| Sbjct 8122713 CCGGACGGGGAG 8122702 >seq741 Length=3422296 Score = 95.1 bits (104), Expect = 2e-14 Identities = 68/78 (87%), Gaps = 3/78 (4%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| ||||||||||||||| ||||| Sbjct 1087169 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCATGCGGGAGACCGGGGTTTGATTC 1087110 Query 8718 CCCGAC---GAGGAGCAG 8732 |||||| ||||||||| Sbjct 1087109 CCCGACAGGGAGGAGCAG 1087092 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| ||||||||||||||| ||||| Sbjct 1087169 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCATGCGGGAGACCGGGGTTTGATTC 1087110 Query 11789 CCCGACGAGGAGG 11801 |||||| ||||| Sbjct 1087109 CCCGACAGGGAGG 1087097 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| |||||||| || ||||||||||||||| |||| |||||||| | ||||||| Sbjct 1087098 CTCCCTGTCGGGGAATCAAACCCCGGTCTCCCGCATGACAGGCGGGGATACTCACCACTA 1087157 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 1087158 TACTAACGAGGAT 1087170 >seq490 Length=542777 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||| ||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 29801 TCCTCATTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 29860 Query 8718 CCCGACGAGGAG 8729 || |||| |||| Sbjct 29861 CCTGACGGGGAG 29872 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||| ||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 29801 TCCTCATTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 29860 Query 11789 CCCGACGAGGAG 11800 || |||| |||| Sbjct 29861 CCTGACGGGGAG 29872 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| |||| |||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 29872 CTCCCCGTCAGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 29813 Query 139413 TACTAACGAGGAT 139425 |||||| |||||| Sbjct 29812 TACTAATGAGGAT 29800 >seq44707 Length=8903611 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||||||||| || | ||||| || |||||||| |||||| ||| Sbjct 6982853 TCCTCGTTAGTATAGTGGTTAGTATCCCTGCCTGTCACATGGGAGACCAGGGTTCAGTTC 6982794 Query 8718 CCCGACG 8724 ||||||| Sbjct 6982793 CCCGACG 6982787 >seq89 Length=8839041 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||| |||||||||||||| ||||| |||| || || | |||||||| ||||||||||| Sbjct 5338795 TTCCTTGTTAGTATAGTGGTGAGTATCCCCGCCTATCACGCGGGAGACTGGGGTTCGATT 5338736 Query 8717 CCCCGACGAGGAG 8729 |||| | | |||| Sbjct 5338735 CCCCAATGGGGAG 5338723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652430651580000