Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tupaia_20chinensis_20[refseq_20GCF_5F000334495.1_202013-01-31] 50,750 sequences; 2,846,580,235 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq436 138 1e-27 seq42965 136 4e-27 seq460 120 3e-22 seq309 114 1e-20 seq50 113 4e-20 seq43265 111 2e-19 seq139 111 2e-19 seq130 91.5 1e-13 seq495 89.7 5e-13 seq290 87.8 2e-12 seq204 87.8 2e-12 seq84 87.8 2e-12 >seq436 Length=2687165 Score = 138 bits (152), Expect = 1e-27 Identities = 151/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || ||||| || | ||| | | | || || ||||||||||| Sbjct 806395 GTAGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCC 806453 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| |||||| || |||||||||||||| || || |||||| ||| Sbjct 806454 TGCAAAGATGAGCCTCTGCTGATCAGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTT 806513 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| ||||| |||||||||| |||| ||||| ||| ||||||||||| || Sbjct 806514 CACATTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGGGT 806573 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 806574 CTTCACGAAGATCTGCAT 806591 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || ||||| || | ||| | | | || || ||||||||||| Sbjct 806623 GTAGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCC 806681 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| ||||||||| |||||||||||||| || || |||||| ||| Sbjct 806682 TGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTT 806741 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| ||||| |||| ||||| |||| ||||| ||| ||||| || ||||| Sbjct 806742 CACATTCTCAATGGTGTCACTGGGTTCCACCTCGAGGGTGATGGTCTTGCCAGTGAGAGT 806801 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 806802 CTTCACAAAGATCTGCAT 806819 >seq42965 Length=562198 Score = 136 bits (150), Expect = 4e-27 Identities = 151/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| || | | | | | || || ||||| || | Sbjct 301441 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCA-TCTTCCAGCTGTTTCC 301499 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | || ||||||||| |||||||| ||||||||||| |||||| || Sbjct 301500 CGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGGATCTTCGCCT 301559 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| |||||||||| |||| ||||| ||| ||||| ||||| | Sbjct 301560 TGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGG 301619 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 301620 TCTTCACGAAGATCTGCAT 301638 Score = 136 bits (150), Expect = 4e-27 Identities = 151/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| || | | | | | || || ||||| || | Sbjct 301669 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCA-TCTTCCAGCTGTTTCC 301727 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | || ||||||||| |||||||| ||||||||||| |||||| || Sbjct 301728 CGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGGATCTTCGCCT 301787 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| |||||||||| |||| ||||| ||| ||||| ||||| | Sbjct 301788 TGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGG 301847 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 301848 TCTTCACGAAGATCTGCAT 301866 Score = 136 bits (150), Expect = 4e-27 Identities = 151/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| || | | | | | || || ||||| || | Sbjct 301897 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCA-TCTTCCAGCTGTTTCC 301955 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | || ||||||||| |||||||| ||||||||||| |||||| || Sbjct 301956 CGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGGATCTTCGCCT 302015 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| |||||||||| |||| ||||| ||| ||||| ||||| | Sbjct 302016 TGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGG 302075 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 302076 TCTTCACGAAGATCTGCAT 302094 Score = 136 bits (150), Expect = 4e-27 Identities = 151/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| || | | | | | || || ||||| || | Sbjct 302125 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCA-TCTTCCAGCTGTTTCC 302183 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | || ||||||||| |||||||| ||||||||||| |||||| || Sbjct 302184 CGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGGATCTTCGCCT 302243 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| |||||||||| |||| ||||| ||| ||||| ||||| | Sbjct 302244 TGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGG 302303 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 302304 TCTTCACGAAGATCTGCAT 302322 Score = 136 bits (150), Expect = 4e-27 Identities = 151/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| || | | | | | || || ||||| || | Sbjct 302353 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCA-TCTTCCAGCTGTTTCC 302411 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | || ||||||||| |||||||| ||||||||||| |||||| || Sbjct 302412 CGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGGATCTTCGCCT 302471 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| |||||||||| |||| ||||| ||| ||||| ||||| | Sbjct 302472 TGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGG 302531 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 302532 TCTTCACGAAGATCTGCAT 302550 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || ||||| || || ||| | || || || || || || Sbjct 301214 GTTGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGTTGTTTCCCA 301273 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || | || ||||||||| |||||||| ||||||||||| |||||| |||| Sbjct 301274 GCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGGATCTTCGCCTTG 301333 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||||| ||||| |||||||||| |||| ||||| ||| ||||| ||||| || Sbjct 301334 ACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTC 301393 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 301394 TTCACGAAGATCTGCAT 301410 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| || | | | | | || || ||||| || | Sbjct 302581 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGGGCGTCCA-TCTTCCAGCTGTTTCC 302639 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | || ||||||||| |||||||| ||||||||||| |||||| || Sbjct 302640 CGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCTTGGATCTTCGCCT 302699 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| ||||||| || |||| ||||| ||| ||||| || || | Sbjct 302700 TGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTTAGGG 302759 Query 133642 TTTTTACGAAAATCTGCAT 133660 | |||||||| |||||||| Sbjct 302760 TCTTTACGAAGATCTGCAT 302778 >seq460 Length=2238155 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||||||| |||| || ||||| || | ||| | | | || || |||| Sbjct 439772 ATGCAGGGTGGACTCTCTCTGGATGTTGTAGTCAGAGACAGTGCGGCCA-TCTTCCAGCT 439714 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | |||||||| | || || |||||||||||||| | |||||| |||||||| | | | Sbjct 439713 GTTTGCCCGCAAATATCAGGCGCTGCTGGTCGGGTGAGATGCCCTCCTTGTCTTGGGTTT 439654 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||| | ||||| ||||||| || |||| ||||| ||| ||||| | Sbjct 439653 TGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCTG 439594 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || | ||| |||||||| Sbjct 439593 TCAGGGTCTTCATGAAGATCTGCAT 439569 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || ||||| |||||||| | || | |||||||||||||| | |||||| |||||| Sbjct 439006 TCTTCCAGCTGTTTGCCCGCAAATATCAAGCGCTGCTGGTCGGGTGAGATGCCCTCCTTG 438947 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || | | || ||||| | ||| | ||||| ||||||| || |||| ||||| | Sbjct 438946 TCTTGGGTTTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 438887 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| ||||| || || | ||| |||||||| Sbjct 438886 GTCTTGCCTGTCAGGGTCTTCATGAAGATCTGCAT 438852 >seq309 Length=2273895 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||||||||| || ||||| || || ||| | | | || || |||| Sbjct 961364 ATGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCA-TCTTCCAGCT 961306 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | |||||||| | || || ||||||||||||| |||||||| | |||||| ||| | Sbjct 961305 GTTTGCCCGCAAATATCAGACGCTGCTGGTCGGATGGGATGCCCTACTTGTCTTGGATTT 961246 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | | | | | ||| | || || ||||||| | |||| ||||| ||| ||||| | Sbjct 961245 TGGCCGTCACATTCTCTATGGTATCCCTGGGCTCAGCCTCGAGGGTGATGGTCTTGCCCG 961186 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || ||||| |||||||| Sbjct 961185 TCAGGGTCTTCACGAAGATCTGCAT 961161 >seq50 Length=2506936 Score = 113 bits (124), Expect = 4e-20 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || ||||| || || |||| | | | ||||| ||||| |||| Sbjct 1731553 GGTGGACTCTTTCTGGATGTTGTAGTCAGACAGCGTGCGGCCA-TCCTCCAGCTGTTTGC 1731495 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 |||| | || || ||||||||||| || |||||||| | |||||| ||| || || Sbjct 1731494 CCGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTTCTTGTCTTGGATTTTGGCCT 1731435 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||| | || || ||||||| || |||| || || | ||||| ||||| | Sbjct 1731434 TGACATTCTCGATGGTATCACTGGGCTCGACCTCGAGGGAGATTTTCTTGCCCGTCAGGG 1731375 Query 133642 TTTTTACGAAAATCTG 133657 | || | ||| ||||| Sbjct 1731374 TCTTCATGAAGATCTG 1731359 >seq43265 Length=2440742 Score = 111 bits (122), Expect = 2e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||||||||| || || || || | ||| | | | || || |||| Sbjct 2202553 ATGGAGGGTGGACTCTTTCTGGATGTTATAGTCAGAAAGAGTGCGGCCA-TCTTCCAGCT 2202611 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| || | || || |||||||||| ||| |||||||| |||||||| ||| | Sbjct 2202612 GTTTGCCGGCAAATATCAGACGCTGCTGGTTGGGTGGGATGCCCTCCTTGTCTTGGATTT 2202671 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||| | ||||| ||||| || | || ||||| ||| ||||| | Sbjct 2202672 TGGCCTTGACATTCTCGATGGTGTCACTGGGCCTGACCTTGAGGGTGATGGTCTTGCCCG 2202731 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || ||||| |||||||| Sbjct 2202732 TCAGGGTCTTCACGAAGATCTGCAT 2202756 >seq139 Length=10686148 Score = 111 bits (122), Expect = 2e-19 Identities = 149/205 (73%), Gaps = 8/205 (4%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || ||| | || || | || | | | ||||| ||||| |||| Sbjct 400171 GGTGGACTCTTTCTGGATGTTGCAGTCAGACAGCATGCGGCCA-TCCTCCAGCTGTTTGC 400113 Query 133522 CCGCGTAAATGAGCCGCTGC------TGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | || | || || |||||| |||| ||| |||||||| |||||||| ||| | Sbjct 400112 CGGCAAATATCAGACGCTGCTGGTGGTGGTGGGGGGGGATGCCCTCCTTGTCTTGGATTT 400053 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||| | ||||| ||| ||| || |||| ||||| ||| ||||| | Sbjct 400052 TGGCCTTGACATTCTCCATGGTGTCACTGGCCTCGACCTCGAGGGTGATGGTCTTGCCCG 399993 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || ||||| |||||||| Sbjct 399992 TCAGGGTCTTCACGAAGATCTGCAT 399968 >seq130 Length=6872514 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/200 (71%), Gaps = 5/200 (3%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCAT--CGTGGACGAGTCCTCGAGCTGCTTG 133520 ||||||||||||||| || ||||| || | | ||| | || || ||||||||| Sbjct 3042027 GGTGGACTCTTTCTGAATGTTGTAGTCAGAAAGAACATGGCCA--TCATCCAGCTGCTTG 3042084 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || || ||| |||| ||||||||| || |||| |||||| || | |||||| | Sbjct 3042085 CCTGCAGCAATAAGCCTCTGCTGGTCAGGGGGGACGCCTTCTTTACCCTGGATCTTGGCC 3042144 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | |||| || || ||||||||| |||| ||||| ||| ||||| | ||| Sbjct 3042145 TTCACATTCTCAGTGGTTTCACCGGGCTCCACCTCGAGGGTGATGGTCTTGCCAATGAGA 3042204 Query 133641 GTTTTTACGAAAATCTGCAT 133660 | | | | ||| |||||||| Sbjct 3042205 G-TCTCATGAAGATCTGCAT 3042223 >seq495 Length=4822262 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 133471 CTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAA 133529 ||||||| |||||||| || | ||| | | | || || ||||||||||| || | Sbjct 1126853 CTTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCCTGCAAAG 1126795 Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589 ||| ||| ||||||||| || || |||||||| || || |||||| ||| | | | Sbjct 1126794 ATGCGCCTCTGCTGGTCAGGGGGTATGCCTTCTTTATCCTGGATCTTAGCCTTCACATCC 1126735 Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649 ||| ||||| |||| ||||| || | ||||| | | ||||| |||| | || || Sbjct 1126734 CCAATGGTGTCACTGGGGTCCACCTCTAGGGTGATGCTCTTGCCAGTCAAGGACTTAACA 1126675 Query 133650 AAAATCTGCAT 133660 || |||||||| Sbjct 1126674 AAGATCTGCAT 1126664 >seq290 Length=9387618 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || |||| || |||||| |||| | ||||| ||| || ||| | || | ||| Sbjct 7872180 AAGTGTAGAGTTGACTCTCTCTGGTTGTTGTAGTCGGACAGGGTGTGCCCATCTCCCAGC 7872121 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || || || | | | | ||||||||| || |||||||||||||| || |||| Sbjct 7872120 TGTTTCCCGGCAGAGACTGGTCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCTTGGATC 7872061 Query 133575 TTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || |||| || | |||| ||||| ||||||| || || | ||||| ||| ||||| Sbjct 7872060 -TTCGCTTTGGCATTCTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCC 7872002 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| | || || | ||| |||||||| Sbjct 7872001 AGTCGGGGTCTTCATGAAGATCTGCAT 7871975 >seq204 Length=10348867 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/156 (73%), Gaps = 5/156 (3%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || ||||| |||||||| | | || |||||||||||||| |||||||| || | Sbjct 4425585 TCTTCCAGCTGTTTGCCCGCAAATACCAGACGCTGCTGGTCGGGTGGGATGCCCTCGTCT 4425526 Query 133566 TCGGTGATCTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 | ||| ||| | ||||| | || | ||||| ||||||| || |||| ||||| Sbjct 4425525 TGGGT----TTTGGCCTTGACATTCTGGATGGTGTCACTGGGCTCGACCTCGAGGGTGAT 4425470 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| | ||| | ||| || || ||||| |||||||| Sbjct 4425469 GGTCTCGCCCGCCAGGGTCTTCACGAAGATCTGCAT 4425434 >seq84 Length=5957874 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/150 (73%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 133511 GAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGT 133570 |||||||||||| || | ||| ||| ||||||||| ||| |||| ||||| || || Sbjct 4351704 GAGCTGCTTGCCTGCAAAGATGCGCCTCTGCTGGTCAGGAAGGATACCTTCTTTATCCTG 4351645 Query 133571 GATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTT 133630 |||||| ||| | | ||||| |||| |||| ||||| |||| ||||| ||| || Sbjct 4351644 GATCTTGGCCTTCACATTCTCAATGATGTCACTGGGTTCCACCTCGAGGGTGATGGTCTT 4351585 Query 133631 GCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||| | || || | || |||||||| Sbjct 4351584 GCTTGTC-GGGTCTTCAAAAAGATCTGCAT 4351556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483114129930000